Gm8167 (predicted gene 8167) - Rat Genome Database

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Gene: Gm8167 (predicted gene 8167) Mus musculus
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Symbol: Gm8167
Name: predicted gene 8167
RGD ID: 1616164
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG666564
Related Functional Gene: Gapdh  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39883,304,378 - 83,305,531 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl883,304,396 - 83,305,353 (+)EnsemblGRCm39 Ensembl
GRCm38882,577,749 - 82,578,902 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl882,577,767 - 82,578,724 (+)EnsemblGRCm38mm10GRCm38
MGSCv37885,101,619 - 85,102,801 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36885,473,514 - 85,474,471 (+)NCBIMGSCv36mm8
Celera886,874,721 - 86,875,909 (+)NCBICelera
Cytogenetic Map8C2NCBI
cM Map839.52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm8167
111 total Variants

Predicted Target Of
Summary Value
Count of predictions:125
Count of miRNA genes:119
Interacting mature miRNAs:123
Transcripts:ENSMUST00000183320
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 37 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88079340489740987Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse

1 to 10 of 37 rows





RefSeq Transcripts NG_007825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC159098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000183320
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl883,304,396 - 83,305,353 (+)Ensembl
GRCm38.p6 Ensembl882,577,767 - 82,578,724 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000097984 Ensembl, ENTREZGENE
MGD MGI:3644250 ENTREZGENE
NCBI Gene 666564 ENTREZGENE
PhenoGen Gm8167 PhenoGen