Xlr4b (X-linked lymphocyte-regulated 4B)

Gene: Xlr4b (X-linked lymphocyte-regulated 4B) Mus musculus

Analyze

No known orthologs.

Symbol:

Xlr4b

Name:

X-linked lymphocyte-regulated 4B

RGD ID:

1615933

MGI Page

MGI

Description:

Involved in positive regulation of dendritic spine morphogenesis and positive regulation of synapse assembly. Acts upstream of or within dendritic spine organization; dopamine secretion; and response to cocaine. Predicted to be active in synaptonemal complex. Is expressed in brain; hindgut diverticulum; liver; placenta; and yolk sac.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

X-linked lymphocyte regulated gene 4; Xl; Xlr4

RGD Orthologs

Alliance Orthologs

More Info

homologs ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	72,257,928 - 72,266,059 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	72,257,939 - 72,266,059 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	73,214,321 - 73,222,453 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	73,214,333 - 73,222,453 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	70,459,704 - 70,467,792 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	56,302,765 - 56,311,275 (-)	NCBI		MGSCv36	mm8
MGSCv36	X	69,467,085 - 69,475,176 (+)	NCBI		MGSCv36	mm8
Celera	X	63,998,769 - 64,005,063 (-)	NCBI		Celera
Cytogenetic Map	X	A7.3	NCBI
cM Map	X	37.29	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dichloroethane (EXP)

1,2-dimethylhydrazine (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-diaminodiphenylmethane (EXP)

aldehydo-D-glucose (EXP)

all-trans-retinoic acid (EXP)

bisphenol A (EXP)

carbon nanotube (EXP)

D-glucose (EXP)

fructose (EXP)

glucose (EXP)

glyphosate (EXP)

mono(2-ethylhexyl) phthalate (EXP)

perfluorooctane-1-sulfonic acid (EXP)

phenobarbital (EXP)

pirinixic acid (EXP)

silicon dioxide (EXP)

titanium dioxide (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

dendritic spine organization (IGI)

dopamine secretion (IGI)

meiotic cell cycle (IBA)

positive regulation of dendritic spine morphogenesis (IMP)

positive regulation of synapse assembly (IMP)

response to cocaine (IGI)

spermatid development (IBA)

Cellular Component

synaptonemal complex (IBA)

Molecular Function

molecular_function (ND)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:15908950	PMID:15908953	PMID:16141072	PMID:16141073	PMID:19463158	PMID:20510857
PMID:21873635	PMID:22008794	PMID:28680878	PMID:32113966

Genomics

Variants

Variants in Xlr4b
1 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	589
Count of miRNA genes:	305
Interacting mature miRNAs:	326
Transcripts:	ENSMUST00000069077, ENSMUST00000069103, ENSMUST00000081827, ENSMUST00000114506, ENSMUST00000124904, ENSMUST00000127701, ENSMUST00000142237, ENSMUST00000156188
Prediction methods:	Miranda, Pita, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357433	Dbts2_m	diabetes 2 (mouse)			Not determined		X	7226295	150107038	Mouse
13208567	Bmiq12_m	body mass index QTL 12 (mouse)					X	35263653	77043606	Mouse
1301009	Pbwg7_m	postnatal body weight growth 7 (mouse)			Not determined		X	39113714	73113814	Mouse
4141565	Pbwg21_m	postnatal body weight growth 21 (mouse)			Not determined		X	39113714	73113814	Mouse
1300794	Spha2_m	sperm head anomaly 2 (mouse)			Not determined		X	39921498	86260137	Mouse
4142200	Rtwq1_m	reduced testis weight QTL 1 (mouse)			Not determined			41477060	75477203	Mouse
1301278	Bdln1_m	body length 1 (mouse)			Not determined		X	41702106	75702218	Mouse
1300702	Fcsa4_m	femoral cross-sectional area 4 (mouse)			Not determined		X	46027444	80027567	Mouse
4141630	Gct6_m	granulosa cell tumorigenesis 6 (mouse)			Not determined			47179121	129764756	Mouse
25314311	Syncl3_m	synaptonemal complex length 3 (mouse)					X	51988877	89743606	Mouse
13824980	Ferq1_m	genetic fertility QTL 1 (mouse)					X	54045360	148782996	Mouse
10412108	Desp5_m	despair 5 (mouse)			Not determined		X	54722351	88722351	Mouse
13464140	Hdlq108_m	HDL QTL 108 (mouse)					X	57771960	91771960	Mouse
25314316	Mlh1fc3_m	MLH1 foci count 3 (mouse)					X	61343606	89843606	Mouse
25314318	Sccor2_m	synaptonemal complex length to mean MLH1 count ratio 2 (mouse)					X	70543606	96543606	Mouse
1357730	Hstx1_m	hybrid sterility, X chromosome 1 (mouse)			Not determined		X	71453852	77600812	Mouse
4141665	Mhysq2_m	male hybrid sterility QTL 2 (mouse)			Not determined			71453852	139203212	Mouse
12879918	Shm4_m	sperm head morphology 4 (mouse)					X	72072050	102062720	Mouse

Markers in Region

Xlr4b

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	X	A7.3	UniSTS
cM Map	X	29.0	UniSTS
cM Map	X		UniSTS

Xlr4b

Mouse Assembly	Chr	Position (strand)	Source
Cytogenetic Map	X	A7.3	UniSTS
cM Map	X	29.0	UniSTS
cM Map	X		UniSTS

Xlr4b

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	X	A7.3	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001293676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001293677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001293678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001293679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001293680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_021365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006528061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011247604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011247605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011247606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AL136328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL136330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC025576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC034848	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC138975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC138979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC145481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC145482	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC145483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE627633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU755708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX571735	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000069077 ⟹ ENSMUSP00000064686

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	72,257,955 - 72,266,059 (+)	Ensembl
GRCm38.p6 Ensembl	X	73,214,349 - 73,222,453 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000069103 ⟹ ENSMUSP00000066171

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	72,257,955 - 72,266,059 (+)	Ensembl
GRCm38.p6 Ensembl	X	73,214,349 - 73,222,453 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000081827 ⟹ ENSMUSP00000080511

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	72,258,038 - 72,266,056 (+)	Ensembl
GRCm38.p6 Ensembl	X	73,214,432 - 73,222,450 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000114506 ⟹ ENSMUSP00000110151

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	72,257,956 - 72,263,676 (+)	Ensembl
GRCm38.p6 Ensembl	X	73,214,350 - 73,220,070 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000124904

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	72,257,955 - 72,266,059 (+)	Ensembl
GRCm38.p6 Ensembl	X	73,214,349 - 73,222,453 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000127701

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	72,260,956 - 72,263,665 (+)	Ensembl
GRCm38.p6 Ensembl	X	73,217,350 - 73,220,059 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000142237

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	72,261,969 - 72,265,547 (+)	Ensembl
GRCm38.p6 Ensembl	X	73,218,363 - 73,221,941 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000156188 ⟹ ENSMUSP00000116105

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	72,257,939 - 72,265,566 (+)	Ensembl
GRCm38.p6 Ensembl	X	73,214,333 - 73,221,960 (+)	Ensembl

RefSeq Acc Id:

NM_001293676 ⟹ NP_001280605

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,939 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,333 - 73,222,453 (+)	NCBI

Sequence:

show sequence

AACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGGTGAGGCAGTGT
CAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGGACGCTGTGGTA
AAGGACCCTGTGTTCATCAAACTTTCATGGATCGCTGGGTGCCCTGAGGTGCACCTGGAATCTA
CTTGGTGAGTACAGCTCTCAAACGGAAGTGCCGCCTACAGTGCAGGGAGACTATAGTCATGGCT
TCCAAAATCAAGGGCAGACCTCCCAAGCAACCAAAGGTGACTCCTGCTCTGCCATCTAATGATT
CACAGCAGCTTCATGAAAATAACCCAGGAAACAATCTGGCCCTTGAAACTTGTGGGGAAAGCAG
TTCTTCCCATGGAACAGGTGGACCAAAGCCAGGGCCCAGTAAGAAAACTCTAAATGAAAGGAAG
AGAAAGTATGGGGTGAGTGTAAATAAAACTGTCCAAAACATTGAGTGGAATGTTGACCACTTCT
TGAAAGTCCAGCATGAGCGAAGGCAGGAACTTTATAAGGACTATTCTCATCAGTTTTTGACTTT
GGTTATGATGTGGAATATAGATGTAGACCAAATCAAGAAACAGGCTGGAAAACTCTCTGATATA
CTTGATGAGCAACAGAAGCTTTTTCAACAATTTCAAAGTATTCATATGCAGAAAATAGAAGAAT
TTAAGGAGTTATGTGATCGACACTTGAAGAATCTACAGGCTATTAAGTGTTGTCGCCGAAAAGC
TATTATTGAGGAAGCCAGAAAGCTAATGGACTACTTGGAAAAGAGAGTTACTGAAGAAACTGTT
CACGTAAACAAGCAGGAAGCAAAGGATGGTGTTCAATCATCACTTCTATCCCTGCTAATCTCGT
AACACCTGGAAGAAAGAAGCTCAACCACCATGAAATGACTTCATGATATTTCTAAATCTATGGT
GACATGACACTGCTATTGTAGTGATTATCAATTCCTTGTTCACATCTCTGAGGGGTCAGAAAAA
CTTTACTGAGAATGTTTTGTTTGTGGAATTTATCGCACATGTAGTATGGGATCATCAGGGATAT
TATATATGAGGTCTCGTGTACAGTTAAAGCTTGCGTCCTGTGATTTCCTGTATGGATACCCTGG
GAAATCCTTACTTGGGAACGTTTGATTTAATAAACATGAAATAGTTTCAGAAAAAAAAAAAAAA
AAA

hide sequence

RefSeq Acc Id:

NM_001293677 ⟹ NP_001280606

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,939 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,333 - 73,222,453 (+)	NCBI

Sequence:

show sequence

AACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGGTGAGGCAGTGT
CAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGGACGCTGTGCTT
TCATGGATCGCTGGGTGCCCTGAGGTGCACCTGGAATCTACTTGGATTCCTGTCTAGTGCAGGG
AGACTATAGTCATGGCTTCCAAAATCAAGGGCAGACCTCCCAAGCAACCAAAGGTGACTCCTGC
TCTGCCATCTAATGATTCACAGCAGCTTCATGAAAATAACCCAGGAAACAATCTGGCCCTTGAA
ACTTGTGGGGAAAGCAGTTCTTCCCATGGAACAGGTGGACCAAAGCCAGGGCCCAGTAAGAAAA
CTCTAAATGAAAGGAAGAGAAAGTATGGGGTGAGTGTAAATAAAACTGTCCAAAACATTGAGTG
GAATGTTGACCACTTCTTGAAAGTCCAGCATGAGCGAAGGCAGGAACTTTATAAGGACTATTCT
CATCAGTTTTTGACTTTGGTTATGATGTGGAATATAGATGTAGACCAAATCAAGAAACAGGCTG
GAAAACTCTCTGATATACTTGATGAGCAACAGAAGCTTTTTCAACAATTTCAAAGTATTCATAT
GCAGAAAATAGAAGAATTTAAGGAGTTATGTGATCGACACTTGAAGAATCTACAGGCTATTAAG
TGTTGTCGCCGAAAAGCTATTATTGAGGAAGCCAGAAAGCTAATGGACTACTTGGAAAAGAGAG
TTACTGAAGAAACTGTTCACGTAAACAAGCAGGAAGCAAAGGATGGTGTTCAATCATCACTTCT
ATCCCTGCTAATCTCGTAACACCTGGAAGAAAGAAGCTCAACCACCATGAAATGACTTCATGAT
ATTTCTAAATCTATGGTGACATGACACTGCTATTGTAGTGATTATCAATTCCTTGTTCACATCT
CTGAGGGGTCAGAAAAACTTTACTGAGAATGTTTTGTTTGTGGAATTTATCGCACATGTAGTAT
GGGATCATCAGGGATATTATATATGAGGTCTCGTGTACAGTTAAAGCTTGCGTCCTGTGATTTC
CTGTATGGATACCCTGGGAAATCCTTACTTGGGAACGTTTGATTTAATAAACATGAAATAGTTT
CAGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001293678 ⟹ NP_001280607

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,939 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,333 - 73,222,453 (+)	NCBI

Sequence:

show sequence

AACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGGTGAGGCAGTGT
CAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGGACGCTGTGGTA
AAGGACCCTGTGTTCATCAAACTTTCATGGATCGCTGGGTGCCCTGAGGTGCACCTGGAATCTA
CTTGGATTCCTGTCTAGTGCAGGGAGACTATAGTCATGGCTTCCAAAATCAAGGGCAGACCTCC
CAAGCAACCAAAGGTGACTCCTGCTCTGCCATCTAATGATTCACAGCAGCTTCATGAAAATAAC
CCAGGAAACAATCTGGCCCTTGAAACTTGTGGGGAAAGCAGTTCTTCCCATGGAACAGGTGGAC
CAAAGCCAGGGCCCAGTAAGAAAACTCTAAATGAAAGGAAGAGAAAGTATGGGGTGAGTGTAAA
TAAAACTGTCCAAAACATTGAGTGGAATGTTGACCACTTCTTGAAAGTCCAGCATGAGCGAAGG
CAGGAACTTTATAAGGACTATTCTCATCAGTTTTTGACTTTGGTTATGATGTGGAATATAGATG
TAGACCAAATCAAGAAACAGGCTGGAAAACTCTCTGATATACTTGATGAGCAACAGAAGCTTTT
TCAACAATTTCAAAGTATTCATATGCAGAAAATAGAAGAATTTAAGGAGTTATGTGATCGACAC
TTGAAGAATCTACAGGCTATTAAGTGTTGTCGCCGAAAAGCTATTATTGAGGAAGCCAGAAAGC
TAATGGACTACTTGGAAAAGAGAGTTACTGAAGAAACTGTTCACGTAAACAAGCAGGAAGCAAA
GGATGGTGTTCAATCATCACTTCTATCCCTGCTAATCTCGTAACACCTGGAAGAAAGAAGCTCA
ACCACCATGAAATGACTTCATGATATTTCTAAATCTATGGTGACATGACACTGCTATTGTAGTG
ATTATCAATTCCTTGTTCACATCTCTGAGGGGTCAGAAAAACTTTACTGAGAATGTTTTGTTTG
TGGAATTTATCGCACATGTAGTATGGGATCATCAGGGATATTATATATGAGGTCTCGTGTACAG
TTAAAGCTTGCGTCCTGTGATTTCCTGTATGGATACCCTGGGAAATCCTTACTTGGGAACGTTT
GATTTAATAAACATGAAATAGTTTCAGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001293679 ⟹ NP_001280608

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,939 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,333 - 73,222,453 (+)	NCBI

Sequence:

show sequence

AACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGGTGAGGCAGTGT
CAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGGACGCTGTGCTT
TCATGGATCGCTGGGTGCCCTGAGGTGCACCTGGAATCTACTTGGTGAGTACAGCTCTCAAACG
GAAGTGCCGCCTACAGGATTCCTGTCTAGTGCAGGGAGACTATAGTCATGGCTTCCAAAATCAA
GGGCAGACCTCCCAAGCAACCAAAGGTGACTCCTGCTCTGCCATCTAATGATTCACAGCAGCTT
CATGAAAATAACCCAGGAAACAATCTGGCCCTTGAAACTTGTGGGGAAAGCAGTTCTTCCCATG
GAACAGGTGGACCAAAGCCAGGGCCCAGTAAGAAAACTCTAAATGAAAGGAAGAGAAAGTATGG
GGTGAGTGTAAATAAAACTGTCCAAAACATTGAGTGGAATGTTGACCACTTCTTGAAAGTCCAG
CATGAGCGAAGGCAGGAACTTTATAAGGACTATTCTCATCAGTTTTTGACTTTGGTTATGATGT
GGAATATAGATGTAGACCAAATCAAGAAACAGGCTGGAAAACTCTCTGATATACTTGATGAGCA
ACAGAAGCTTTTTCAACAATTTCAAAGTATTCATATGCAGAAAATAGAAGAATTTAAGGAGTTA
TGTGATCGACACTTGAAGAATCTACAGGCTATTAAGTGTTGTCGCCGAAAAGCTATTATTGAGG
AAGCCAGAAAGCTAATGGACTACTTGGAAAAGAGAGTTACTGAAGAAACTGTTCACGTAAACAA
GCAGGAAGCAAAGGATGGTGTTCAATCATCACTTCTATCCCTGCTAATCTCGTAACACCTGGAA
GAAAGAAGCTCAACCACCATGAAATGACTTCATGATATTTCTAAATCTATGGTGACATGACACT
GCTATTGTAGTGATTATCAATTCCTTGTTCACATCTCTGAGGGGTCAGAAAAACTTTACTGAGA
ATGTTTTGTTTGTGGAATTTATCGCACATGTAGTATGGGATCATCAGGGATATTATATATGAGG
TCTCGTGTACAGTTAAAGCTTGCGTCCTGTGATTTCCTGTATGGATACCCTGGGAAATCCTTAC
TTGGGAACGTTTGATTTAATAAACATGAAATAGTTTCAGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001293680 ⟹ NP_001280609

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,939 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,333 - 73,222,453 (+)	NCBI

Sequence:

show sequence

AACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGGTGAGGCAGTGT
CAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGGACGCTGTGGTA
AAGGACCCTGTGTTCATCAAACTTTCATGGATCGCTGGGTGCCCTGAGGTGCACCTGGAATCTA
CTTGGTGAGTACAGCTCTCAAACGGAAGTGCCGCCTACAGGATTCCTGTCTAGTGCAGGGAGAC
TATAGTCATGGCTTCCAAAATCAAGGGCAGACCTCCCAAGCAACCAAAGGTGACTCCTGCTCTG
CCATCTAATGATTCACAGCAGCTTCATGAAAATAACCCAGGAAACAATCTGGCCCTTGAAACTT
GTGGGGAAAGCAGTTCTTCCCATGGAACAGGTGGACCAAAGCCAGGGCCCAGTAAGAAAACTCT
AAATGAAAGGAAGAGAAAGTATGGGGTGAGTGTAAATAAAACTGTCCAAAACATTGAGTGGAAT
GTTGACCACTTCTTGAAAGTCCAGCATGAGCGAAGGCAGGAACTTTATAAGGACTATTCTCATC
AGTTTTTGACTTTGGTTATGATGTGGAATATAGATGTAGACCAAATCAAGAAACAGGCTGGAAA
ACTCTCTGATATACTTGATGAGCAACAGAAGCTTTTTCAACAATTTCAAAGTATTCATATGCAG
AAAATAGAAGAATTTAAGGAGTTATGTGATCGACACTTGAAGAATCTACAGGCTATTAAGTGTT
GTCGCCGAAAAGCTATTATTGAGGAAGCCAGAAAGCTAATGGACTACTTGGAAAAGAGAGTTAC
TGAAGAAACTGTTCACGTAAACAAGCAGGAAGCAAAGGATGGTGTTCAATCATCACTTCTATCC
CTGCTAATCTCGTAACACCTGGAAGAAAGAAGCTCAACCACCATGAAATGACTTCATGATATTT
CTAAATCTATGGTGACATGACACTGCTATTGTAGTGATTATCAATTCCTTGTTCACATCTCTGA
GGGGTCAGAAAAACTTTACTGAGAATGTTTTGTTTGTGGAATTTATCGCACATGTAGTATGGGA
TCATCAGGGATATTATATATGAGGTCTCGTGTACAGTTAAAGCTTGCGTCCTGTGATTTCCTGT
ATGGATACCCTGGGAAATCCTTACTTGGGAACGTTTGATTTAATAAACATGAAATAGTTTCAGA
AAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_021365 ⟹ NP_067340

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,939 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,333 - 73,222,453 (+)	NCBI
MGSCv37	X	70,459,704 - 70,467,792 (+)	RGD
Celera	X	63,998,769 - 64,005,063 (-)	RGD
cM Map	X		ENTREZGENE

Sequence:

show sequence

AACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGGTGAGGCAGTGT
CAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGGACGCTGTGGTA
AAGGACCCTGTGTTCATCAAAGTGAGGAGGCTAAGGGTTGATTCAAGGCCGTTGTAAAGGTTCT
AAAGGAACCCCCGGGTAATCCAAGTGAGGCTAGAGTTGATTCAAGGCTGTTGAGGGAGGAGCTT
TCATGGATCGCTGGGTGCCCTGAGGTGCACCTGGAATCTACTTGGTGAGTACAGCTCTCAAACG
GAAGTGCCGCCTACAGGATTCCTGTCTAGTGCAGGGAGACTATAGTCATGGCTTCCAAAATCAA
GGGCAGACCTCCCAAGCAACCAAAGGTGACTCCTGCTCTGCCATCTAATGATTCACAGCAGCTT
CATGAAAATAACCCAGGAAACAATCTGGCCCTTGAAACTTGTGGGGAAAGCAGTTCTTCCCATG
GAACAGGTGGACCAAAGCCAGGGCCCAGTAAGAAAACTCTAAATGAAAGGAAGAGAAAGTATGG
GGTGAGTGTAAATAAAACTGTCCAAAACATTGAGTGGAATGTTGACCACTTCTTGAAAGTCCAG
CATGAGCGAAGGCAGGAACTTTATAAGGACTATTCTCATCAGTTTTTGACTTTGGTTATGATGT
GGAATATAGATGTAGACCAAATCAAGAAACAGGCTGGAAAACTCTCTGATATACTTGATGAGCA
ACAGAAGCTTTTTCAACAATTTCAAAGTATTCATATGCAGAAAATAGAAGAATTTAAGGAGTTA
TGTGATCGACACTTGAAGAATCTACAGGCTATTAAGTGTTGTCGCCGAAAAGCTATTATTGAGG
AAGCCAGAAAGCTAATGGACTACTTGGAAAAGAGAGTTACTGAAGAAACTGTTCACGTAAACAA
GCAGGAAGCAAAGGATGGTGTTCAATCATCACTTCTATCCCTGCTAATCTCGTAACACCTGGAA
GAAAGAAGCTCAACCACCATGAAATGACTTCATGATATTTCTAAATCTATGGTGACATGACACT
GCTATTGTAGTGATTATCAATTCCTTGTTCACATCTCTGAGGGGTCAGAAAAACTTTACTGAGA
ATGTTTTGTTTGTGGAATTTATCGCACATGTAGTATGGGATCATCAGGGATATTATATATGAGG
TCTCGTGTACAGTTAAAGCTTGCGTCCTGTGATTTCCTGTATGGATACCCTGGGAAATCCTTAC
TTGGGAACGTTTGATTTAATAAACATGAAATAGTTTCAGAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006528061 ⟹ XP_006528124

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,928 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,321 - 73,222,453 (+)	NCBI

Sequence:

show sequence

AGGCAGGGCCTAACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGG
TGAGGCAGTGTCAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGG
ACGCTGTGCTTTCATGGATCGCTGGGTGCCCTGAGGTGCACCTGGAATCTACTTGGTGAGTACA
GCTCTCAAACGGAAGTGCCGCCTACAGTGCAGGGAGACTATAGTCATGGCTTCCAAAATCAAGG
GCAGACCTCCCAAGCAACCAAAGGTGACTCCTGCTCTGCCATCTAATGATTCACAGCAGCTTCA
TGAAAATAACCCAGGAAACAATCTGGCCCTTGAAACTTGTGGGGAAAGCAGTTCTTCCCATGGA
ACAGGTGGACCAAAGCCAGGGCCCAGTAAGAAAACTCTAAATGAAAGGAAGAGAAAGTATGGGG
TGAGTGTAAATAAAACTGTCCAAAACATTGAGTGGAATGTTGACCACTTCTTGAAAGTCCAGCA
TGAGCGAAGGCAGGAACTTTATAAGGACTATTCTCATCAGTTTTTGACTTTGGTTATGATGTGG
AATATAGATGTAGACCAAATCAAGAAACAGGCTGGAAAACTCTCTGATATACTTGATGAGCAAC
AGAAGCTTTTTCAACAATTTCAAAGTATTCATATGCAGAAAATAGAAGAATTTAAGGAGTTATG
TGATCGACACTTGAAGAATCTACAGGCTATTAAGTGTTGTCGCCGAAAAGCTATTATTGAGGAA
GCCAGAAAGCTAATGGACTACTTGGAAAAGAGAGTTACTGAAGAAACTGTTCACGTAAACAAGC
AGGAAGCAAAGGATGGTGTTCAATCATCACTTCTATCCCTGCTAATCTCGTAACACCTGGAAGA
AAGAAGCTCAACCACCATGAAATGACTTCATGATATTTCTAAATCTATGGTGACATGACACTGC
TATTGTAGTGATTATCAATTCCTTGTTCACATCTCTGAGGGGTCAGAAAAACTTTACTGAGAAT
GTTTTGTTTGTGGAATTTATCGCACATGTAGTATGGGATCATCAGGGATATTATATATGAGGTC
TCGTGTACAGTTAAAGCTTGCGTCCTGTGATTTCCTGTATGGATACCCTGGGAAATCCTTACTT
GGGAACGTTTGATTTAATAAACATGAAATAGTTTCAGA

hide sequence

RefSeq Acc Id:

XM_011247604 ⟹ XP_011245906

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,929 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,322 - 73,222,453 (+)	NCBI

Sequence:

show sequence

GGCAGGGCCTAACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGGT
GAGGCAGTGTCAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGGA
CGCTGTGGTAAAGGACCCTGTGTTCATCAAACTTTCATGGATCGCTGGGTGCCCTGAGGTGCAC
CTGGAATCTACTTGGTGAGTACAGCTCTCAAACGGAAGTGCCGCCTACAGTTCGTTCCTCCAGG
ACAAGTAGAAAGGGACACTCAGGCCCAACCCTGTGGAAACCTGATGCCTGTTCCTGTGGCTTTC
ATTAGCTTCTTGTATCTTTAATATGTCTTTGCACATACAATGTTCAGGATTCCTGTCTAGTGCA
GGGAGACTATAGTCATGGCTTCCAAAATCAAGGGCAGACCTCCCAAGCAACCAAAGGTGACTCC
TGCTCTGCCATCTAATGATTCACAGCAGCTTCATGAAAATAACCCAGGAAACAATCTGGCCCTT
GAAACTTGTGGGGAAAGCAGTTCTTCCCATGGAACAGGTGGACCAAAGCCAGGGCCCAGTAAGA
AAACTCTAAATGAAAGGAAGAGAAAGTATGGGGTGAGTGTAAATAAAACTGTCCAAAACATTGA
GTGGAATGTTGACCACTTCTTGAAAGTCCAGCATGAGCGAAGGCAGGAACTTTATAAGGACTAT
TCTCATCAGTTTTTGACTTTGGTTATGATGTGGAATATAGATGTAGACCAAATCAAGAAACAGG
CTGGAAAACTCTCTGATATACTTGATGAGCAACAGAAGCTTTTTCAACAATTTCAAAGTATTCA
TATGCAGAAAATAGAAGAATTTAAGGAGTTATGTGATCGACACTTGAAGAATCTACAGGCTATT
AAGTGTTGTCGCCGAAAAGCTATTATTGAGGAAGCCAGAAAGCTAATGGACTACTTGGAAAAGA
GAGTTACTGAAGAAACTGTTCACGTAAACAAGCAGGAAGCAAAGGATGGTGTTCAATCATCACT
TCTATCCCTGCTAATCTCGTAACACCTGGAAGAAAGAAGCTCAACCACCATGAAATGACTTCAT
GATATTTCTAAATCTATGGTGACATGACACTGCTATTGTAGTGATTATCAATTCCTTGTTCACA
TCTCTGAGGGGTCAGAAAAACTTTACTGAGAATGTTTTGTTTGTGGAATTTATCGCACATGTAG
TATGGGATCATCAGGGATATTATATATGAGGTCTCGTGTACAGTTAAAGCTTGCGTCCTGTGAT
TTCCTGTATGGATACCCTGGGAAATCCTTACTTGGGAACGTTTGATTTAATAAACATGAAATAG
TTTCAGA

hide sequence

RefSeq Acc Id:

XM_011247605 ⟹ XP_011245907

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,928 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,321 - 73,222,453 (+)	NCBI

Sequence:

show sequence

AGGCAGGGCCTAACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGG
TGAGGCAGTGTCAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGG
ACGCTGTGGTAAAGGACCCTGTGTTCATCAAACTTTCATGGATCGCTGGGTGCCCTGAGGTGCA
CCTGGAATCTACTTGTGCAGGGAGACTATAGTCATGGCTTCCAAAATCAAGGGCAGACCTCCCA
AGCAACCAAAGGTGACTCCTGCTCTGCCATCTAATGATTCACAGCAGCTTCATGAAAATAACCC
AGGAAACAATCTGGCCCTTGAAACTTGTGGGGAAAGCAGTTCTTCCCATGGAACAGGTGGACCA
AAGCCAGGGCCCAGTAAGAAAACTCTAAATGAAAGGAAGAGAAAGTATGGGGTGAGTGTAAATA
AAACTGTCCAAAACATTGAGTGGAATGTTGACCACTTCTTGAAAGTCCAGCATGAGCGAAGGCA
GGAACTTTATAAGGACTATTCTCATCAGTTTTTGACTTTGGTTATGATGTGGAATATAGATGTA
GACCAAATCAAGAAACAGGCTGGAAAACTCTCTGATATACTTGATGAGCAACAGAAGCTTTTTC
AACAATTTCAAAGTATTCATATGCAGAAAATAGAAGAATTTAAGGAGTTATGTGATCGACACTT
GAAGAATCTACAGGCTATTAAGTGTTGTCGCCGAAAAGCTATTATTGAGGAAGCCAGAAAGCTA
ATGGACTACTTGGAAAAGAGAGTTACTGAAGAAACTGTTCACGTAAACAAGCAGGAAGCAAAGG
ATGGTGTTCAATCATCACTTCTATCCCTGCTAATCTCGTAACACCTGGAAGAAAGAAGCTCAAC
CACCATGAAATGACTTCATGATATTTCTAAATCTATGGTGACATGACACTGCTATTGTAGTGAT
TATCAATTCCTTGTTCACATCTCTGAGGGGTCAGAAAAACTTTACTGAGAATGTTTTGTTTGTG
GAATTTATCGCACATGTAGTATGGGATCATCAGGGATATTATATATGAGGTCTCGTGTACAGTT
AAAGCTTGCGTCCTGTGATTTCCTGTATGGATACCCTGGGAAATCCTTACTTGGGAACGTTTGA
TTTAATAAACATGAAATAGTTTCAGA

hide sequence

RefSeq Acc Id:

XM_011247606 ⟹ XP_011245908

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	72,257,928 - 72,266,059 (+)	NCBI
GRCm38	X	73,214,321 - 73,222,453 (+)	NCBI

Sequence:

show sequence

AGGCAGGGCCTAACCAAGAAGGGGCTTTTTTCCTGGGAGGTAAAGGGTTCTGAGGAGATTGTGG
TGAGGCAGTGTCAGAGGAAGGTGACGCGGAAGGGAAGTACTAACCCGAACGAAGGAACGAAGGG
ACGCTGTGCTTTCATGGATCGCTGGGTGCCCTGAGGTGCACCTGGAATCTACTTGTGCAGGGAG
ACTATAGTCATGGCTTCCAAAATCAAGGGCAGACCTCCCAAGCAACCAAAGGTGACTCCTGCTC
TGCCATCTAATGATTCACAGCAGCTTCATGAAAATAACCCAGGAAACAATCTGGCCCTTGAAAC
TTGTGGGGAAAGCAGTTCTTCCCATGGAACAGGTGGACCAAAGCCAGGGCCCAGTAAGAAAACT
CTAAATGAAAGGAAGAGAAAGTATGGGGTGAGTGTAAATAAAACTGTCCAAAACATTGAGTGGA
ATGTTGACCACTTCTTGAAAGTCCAGCATGAGCGAAGGCAGGAACTTTATAAGGACTATTCTCA
TCAGTTTTTGACTTTGGTTATGATGTGGAATATAGATGTAGACCAAATCAAGAAACAGGCTGGA
AAACTCTCTGATATACTTGATGAGCAACAGAAGCTTTTTCAACAATTTCAAAGTATTCATATGC
AGAAAATAGAAGAATTTAAGGAGTTATGTGATCGACACTTGAAGAATCTACAGGCTATTAAGTG
TTGTCGCCGAAAAGCTATTATTGAGGAAGCCAGAAAGCTAATGGACTACTTGGAAAAGAGAGTT
ACTGAAGAAACTGTTCACGTAAACAAGCAGGAAGCAAAGGATGGTGTTCAATCATCACTTCTAT
CCCTGCTAATCTCGTAACACCTGGAAGAAAGAAGCTCAACCACCATGAAATGACTTCATGATAT
TTCTAAATCTATGGTGACATGACACTGCTATTGTAGTGATTATCAATTCCTTGTTCACATCTCT
GAGGGGTCAGAAAAACTTTACTGAGAATGTTTTGTTTGTGGAATTTATCGCACATGTAGTATGG
GATCATCAGGGATATTATATATGAGGTCTCGTGTACAGTTAAAGCTTGCGTCCTGTGATTTCCT
GTATGGATACCCTGGGAAATCCTTACTTGGGAACGTTTGATTTAATAAACATGAAATAGTTTCA
GA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001280605	(Get FASTA)	NCBI Sequence Viewer
	NP_001280606	(Get FASTA)	NCBI Sequence Viewer
	NP_001280607	(Get FASTA)	NCBI Sequence Viewer
	NP_001280608	(Get FASTA)	NCBI Sequence Viewer
	NP_001280609	(Get FASTA)	NCBI Sequence Viewer
	NP_067340	(Get FASTA)	NCBI Sequence Viewer
	XP_006528124	(Get FASTA)	NCBI Sequence Viewer
	XP_011245906	(Get FASTA)	NCBI Sequence Viewer
	XP_011245907	(Get FASTA)	NCBI Sequence Viewer
	XP_011245908	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH25576	(Get FASTA)	NCBI Sequence Viewer
	AAI38976	(Get FASTA)	NCBI Sequence Viewer
	AAI38980	(Get FASTA)	NCBI Sequence Viewer
	AAI45482	(Get FASTA)	NCBI Sequence Viewer
	AAI45483	(Get FASTA)	NCBI Sequence Viewer
	AAI45484	(Get FASTA)	NCBI Sequence Viewer
	CAB65938	(Get FASTA)	NCBI Sequence Viewer
	CAB88072	(Get FASTA)	NCBI Sequence Viewer
	CAB88073	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000064686
	ENSMUSP00000064686.4
	ENSMUSP00000066171
	ENSMUSP00000066171.5
	ENSMUSP00000080511
	ENSMUSP00000080511.4
	ENSMUSP00000110151.2
	ENSMUSP00000116105
	ENSMUSP00000116105.2

RefSeq Acc Id:

NP_067340 ⟸ NM_021365

- UniProtKB:

Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE
RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS
DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE
TVHVNKQEAKDGVQSSLLSLLIS

hide sequence

RefSeq Acc Id:	XP_006528124 ⟸ XM_006528061
- Peptide Label:	isoform X1
- UniProtKB:	Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE TVHVNKQEAKDGVQSSLLSLLIS hide sequence

RefSeq Acc Id:	XP_011245907 ⟸ XM_011247605
- Peptide Label:	isoform X1
- UniProtKB:	Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE TVHVNKQEAKDGVQSSLLSLLIS hide sequence

RefSeq Acc Id:	XP_011245908 ⟸ XM_011247606
- Peptide Label:	isoform X1
- UniProtKB:	Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE TVHVNKQEAKDGVQSSLLSLLIS hide sequence

RefSeq Acc Id:	XP_011245906 ⟸ XM_011247604
- Peptide Label:	isoform X1
- UniProtKB:	Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE TVHVNKQEAKDGVQSSLLSLLIS hide sequence

RefSeq Acc Id:

NP_001280609 ⟸ NM_001293680

- UniProtKB:

Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE
RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS
DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE
TVHVNKQEAKDGVQSSLLSLLIS

hide sequence

RefSeq Acc Id:

NP_001280605 ⟸ NM_001293676

- UniProtKB:

Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE
RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS
DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE
TVHVNKQEAKDGVQSSLLSLLIS

hide sequence

RefSeq Acc Id:

NP_001280607 ⟸ NM_001293678

- UniProtKB:

Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE
RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS
DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE
TVHVNKQEAKDGVQSSLLSLLIS

hide sequence

RefSeq Acc Id:

NP_001280608 ⟸ NM_001293679

- UniProtKB:

Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE
RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS
DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE
TVHVNKQEAKDGVQSSLLSLLIS

hide sequence

RefSeq Acc Id:

NP_001280606 ⟸ NM_001293677

- UniProtKB:

Q9JJQ7 (UniProtKB/TrEMBL), Q9JJQ8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNE
RKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLS
DILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEE
TVHVNKQEAKDGVQSSLLSLLIS

hide sequence

RefSeq Acc Id:

ENSMUSP00000080511 ⟸ ENSMUST00000081827

RefSeq Acc Id:

ENSMUSP00000110151 ⟸ ENSMUST00000114506

RefSeq Acc Id:

ENSMUSP00000064686 ⟸ ENSMUST00000069077

RefSeq Acc Id:

ENSMUSP00000066171 ⟸ ENSMUST00000069103

RefSeq Acc Id:

ENSMUSP00000116105 ⟸ ENSMUST00000156188

Protein Domains

XLR/SYCP3/FAM9

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9JJQ7-F1-model_v2	AlphaFold	Q9JJQ7	1-215	view protein structure

Promoters

RGD ID:

13680696

Promoter ID:

EPDNEW_M24497

Type:

multiple initiation site

Name:

Xlr4b_1

Description:

Mus musculus X-linked lymphocyte-regulated 4B , transcript variant3, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	X	73,214,337 - 73,214,397	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1350975	AgrOrtholog
Ensembl Genes	ENSMUSG00000067768	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000069077	ENTREZGENE
	ENSMUST00000069077.10	UniProtKB/TrEMBL
	ENSMUST00000069103	ENTREZGENE
	ENSMUST00000069103.11	UniProtKB/TrEMBL
	ENSMUST00000081827	ENTREZGENE
	ENSMUST00000081827.4	UniProtKB/TrEMBL
	ENSMUST00000114506.8	UniProtKB/TrEMBL
	ENSMUST00000156188	ENTREZGENE
	ENSMUST00000156188.8	UniProtKB/TrEMBL
InterPro	Cor1/Xlr/Xmr	UniProtKB/TrEMBL
KEGG Report	mmu:27083	UniProtKB/TrEMBL
MGD	MGI:1350975	ENTREZGENE
NCBI Gene	27083	ENTREZGENE
PANTHER	X-LINKED LYMPHOCYTE REGULATED GENE 4-RELATED	UniProtKB/TrEMBL
	XLR/SCP3/FAM9	UniProtKB/TrEMBL
Pfam	Cor1	UniProtKB/TrEMBL
PhenoGen	Xlr4b	PhenoGen
UniProt	B1B0R4_MOUSE	UniProtKB/TrEMBL
	B1B0R5_MOUSE	UniProtKB/TrEMBL
	Q9JJQ4_MOUSE	UniProtKB/TrEMBL
	Q9JJQ7	ENTREZGENE, UniProtKB/TrEMBL
	Q9JJQ8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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