Gm8267 (predicted gene 8267) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Gm8267 (predicted gene 8267) Mus musculus
Analyze
No known orthologs.
Symbol: Gm8267
Name: predicted gene 8267
RGD ID: 1614537
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: EG666744; hypothetical protein LOC666744; uncharacterized protein LOC666744
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391444,954,624 - 44,962,444 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1444,954,295 - 44,987,797 (-)EnsemblGRCm39 Ensembl
GRCm381444,717,167 - 44,724,987 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1444,716,838 - 44,750,340 (-)EnsemblGRCm38mm10GRCm38
MGSCv371445,336,842 - 45,344,662 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361443,628,054 - 43,646,838 (-)NCBIMGSCv36mm8
Celera1440,913,208 - 40,921,029 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.57NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gm8267Mousebiological_process involved_inND 2290270 MGIGO_REF:0000015

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gm8267Mousecellular_component is_active_inND 2290270 MGIGO_REF:0000015

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gm8267Mousemolecular_function enablesND 2290270 MGIGO_REF:0000015


#
Reference Title
Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions


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Variants in Gm8267
213 total Variants

Predicted Target Of
Summary Value
Count of predictions:309
Count of miRNA genes:169
Interacting mature miRNAs:178
Transcripts:ENSMUST00000165003, ENSMUST00000169062
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 27 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse

1 to 10 of 27 rows





RefSeq Transcripts NM_001162954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001436384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC164295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000165003   ⟹   ENSMUSP00000129187
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1444,954,295 - 44,962,444 (-)Ensembl
GRCm38.p6 Ensembl1444,716,838 - 44,724,987 (-)Ensembl
Ensembl Acc Id: ENSMUST00000169062   ⟹   ENSMUSP00000129402
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1444,954,624 - 44,962,444 (-)Ensembl
GRCm38.p6 Ensembl1444,717,167 - 44,724,987 (-)Ensembl
Ensembl Acc Id: ENSMUST00000226900   ⟹   ENSMUSP00000153838
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1444,954,630 - 44,987,797 (-)Ensembl
GRCm38.p6 Ensembl1444,717,173 - 44,750,340 (-)Ensembl
Ensembl Acc Id: ENSMUST00000228619
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1444,961,304 - 44,962,444 (-)Ensembl
GRCm38.p6 Ensembl1444,723,847 - 44,724,987 (-)Ensembl
RefSeq Acc Id: NM_001162954   ⟹   NP_001156426
RefSeq Status: PREDICTED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391444,954,624 - 44,962,444 (-)NCBI
GRCm381444,717,167 - 44,724,987 (-)ENTREZGENE
MGSCv371445,336,842 - 45,344,662 (-)RGD
Celera1440,913,208 - 40,921,029 (-)RGD
cM Map14 ENTREZGENE
Sequence:
Protein RefSeqs NP_001156426 (Get FASTA)   NCBI Sequence Viewer  
  NP_001423313 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000129187.2
  ENSMUSP00000129402
  ENSMUSP00000129402.2
  ENSMUSP00000153838.2
RefSeq Acc Id: NP_001156426   ⟸   NM_001162954
- UniProtKB: E9PW76 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000129187   ⟸   ENSMUST00000165003
Ensembl Acc Id: ENSMUSP00000129402   ⟸   ENSMUST00000169062
Ensembl Acc Id: ENSMUSP00000153838   ⟸   ENSMUST00000226900
Disks large homolog 5 N-terminal

Name Modeler Protein Id AA Range Protein Structure
AF-E9Q207-F1-model_v2 AlphaFold E9Q207 1-261 view protein structure



1 to 15 of 15 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000091923 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000165003.8 UniProtKB/TrEMBL
  ENSMUST00000169062 ENTREZGENE
  ENSMUST00000169062.2 UniProtKB/TrEMBL
  ENSMUST00000226900.2 UniProtKB/TrEMBL
InterPro DUF622 UniProtKB/TrEMBL
KEGG Report mmu:666744 UniProtKB/TrEMBL
MGD MGI:3648993 ENTREZGENE
NCBI Gene 666744 ENTREZGENE
PANTHER 2610042L04RIK PROTEIN-RELATED UniProtKB/TrEMBL
  SPEER/SPETEX UniProtKB/TrEMBL
Pfam DUF622 UniProtKB/TrEMBL
PhenoGen Gm8267 PhenoGen
UniProt E9PW76 ENTREZGENE, UniProtKB/TrEMBL
  E9Q207_MOUSE UniProtKB/TrEMBL
1 to 15 of 15 rows