Nras-ps2 (neuroblastoma ras oncogene, pseudogene 2)

Gene: Nras-ps2 (neuroblastoma ras oncogene, pseudogene 2) Mus musculus

Analyze

Symbol:

Nras-ps2

Name:

neuroblastoma ras oncogene, pseudogene 2

RGD ID:

1614442

MGI Page

MGI

Description:

Type:

pseudo (Ensembl: processed_pseudogene)

RefSeq Status:

INFERRED

Related Functional Gene:

Nras

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	7,258,382 - 7,260,366 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	7,259,966 - 7,260,143 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	7,188,158 - 7,190,142 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	7,189,742 - 7,189,919 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	7,178,239 - 7,180,223 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
Celera	1	7,168,330 - 7,170,314 (-)	NCBI		Celera
Cytogenetic Map	1	A1	NCBI
cM Map	1	2.08	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

Additional References at PubMed

PMID:2676841	PMID:2835730

Genomics

Variants

Variants in Nras-ps2
59 total Variants

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10412226	Alpq4_m	alcohol preference QTL 4 (mouse)			Not determined		1	1	22976684	Mouse
1301891	Alcp25_m	alcohol preference locus 25 (mouse)			Not determined		1	1	25203185	Mouse
1300834	Cia20_m	collagen induced arthritis 20 (mouse)			Not determined		1	1	25203185	Mouse
1301482	Morph1_m	morphine antinociception 1 (mouse)			Not determined		1	1	30367747	Mouse
1301275	Sle10_m	systematic lupus erythematosus susceptibility 10 (mouse)			Not determined		1	2882194	36882352	Mouse
1301370	Adip1_m	adiposity 1 (mouse)			Not determined		1	2882194	36882352	Mouse
13824984	Twq5_m	testis weight QTL 5 (mouse)					1	3069992	184732197	Mouse
15092044	Wtgrme1_m	week ten growth rate, maternal effect 1 (mouse)					1	3280142	37782236	Mouse
15092046	Wngrme1_m	week nine growth rate, maternal effect 1 (mouse)					1	3280142	37782236	Mouse
15092048	Wsigrme1_m	week six growth rate, maternal effect 1 (mouse)					1	3280142	37782236	Mouse
15092050	Wsegrme1_m	week seven growth rate, maternal effect 1 (mouse)					1	3280142	37782236	Mouse
15092051	Wegrme1_m	week eight growth rate, maternal effect 1 (mouse)					1	3280142	37782236	Mouse
15092055	Lgrme1_m	late growth rate, maternal effect 1 (mouse)					1	3280142	37782236	Mouse
11039528	Ccc3_m	colitis susceptibility in the Collaborative Cross 3 (mouse)					1	3680142	195051546	Mouse
1301471	Obq2_m	obesity QTL 2 (mouse)			Not determined		1	3941620	37941887	Mouse
10043970	Obq23_m	obesity QTL 23 (mouse)			Not determined		1	5012665	39012665	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_001420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC138106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X06908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000195269

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	7,259,966 - 7,260,143 (-)	Ensembl
GRCm38.p6 Ensembl	1	7,189,742 - 7,189,919 (-)	Ensembl

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000103709	Ensembl
MGD	MGI:97378	ENTREZGENE
NCBI Gene	18178	ENTREZGENE
PhenoGen	Nras-ps2	PhenoGen

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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