1700044C05Rik (RIKEN cDNA 1700044C05 gene) - Rat Genome Database

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Gene: 1700044C05Rik (RIKEN cDNA 1700044C05 gene) Mus musculus
Analyze
Symbol: 1700044C05Rik (Ensembl: Gm26791)
Name: RIKEN cDNA 1700044C05 gene (Ensembl:predicted gene, 26791)
RGD ID: 1611377
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: PREDICTED
Previously known as: hypothetical protein LOC73306
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914118,603,290 - 118,635,577 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14118,601,097 - 118,635,583 (+)EnsemblGRCm39 Ensembl
GRCm3814118,365,878 - 118,398,165 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14118,365,878 - 118,398,170 (+)EnsemblGRCm38mm10GRCm38
Celera14116,923,277 - 116,955,462 (+)NCBICelera
Cytogenetic Map14E4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
1700044C05RikMousebiological_process involved_inND 2290270 MGIGO_REF:0000015

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
1700044C05RikMousecellular_component is_active_inND 2290270 MGIGO_REF:0000015

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
1700044C05RikMousemolecular_function enablesND 2290270 MGIGO_REF:0000015

PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  



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Variants in 1700044C05Rik
1405 total Variants

The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
12903991Opfaq4_mopen field activity QTL 4 (mouse)14111211209118699845Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse
10755523Hgb2_mhemoglobin 2 (mouse)14105884654125139656Mouse







Ensembl Acc Id: ENSMUST00000186060
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14118,603,290 - 118,635,582 (+)Ensembl
GRCm38.p6 Ensembl14118,365,878 - 118,398,170 (+)Ensembl
RefSeq Acc Id: NR_045624
RefSeq Status: PREDICTED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914118,603,290 - 118,635,577 (+)NCBI
GRCm3814118,365,878 - 118,398,165 (+)ENTREZGENE
Celera14116,923,277 - 116,955,462 (+)ENTREZGENE
cM Map14 ENTREZGENE
Sequence:
RGD ID:8683202
Promoter ID:EPDNEW_M19632
Type:multiple initiation site
Name:1700044C05Rik_1
Description:Mus musculus RIKEN cDNA 1700044C05 gene , long non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814118,365,890 - 118,365,950EPDNEW
RGD ID:15094512
Promoter ID:EPDNEWNC_M2415
Type:initiation region
Name:1700044C05Rik_1
Description:RIKEN cDNA 1700044C05 gene [Source:MGISymbol;Acc:MGI:1920556]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814118,365,890 - 118,365,950EPDNEWNC


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000096997 Ensembl, ENTREZGENE
  ENSMUSG00000099911 Ensembl
Ensembl Transcript ENSMUST00000186060 ENTREZGENE
MGD MGI:1920556 ENTREZGENE
NCBI Gene 73306 ENTREZGENE
PhenoGen 1700044C05Rik PhenoGen
RNAcentral URS0000759FAD RNACentral
  URS0000761274 RNACentral