1700100L14Rik (RIKEN cDNA 1700100L14 gene) - Rat Genome Database

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Gene: 1700100L14Rik (RIKEN cDNA 1700100L14 gene) Mus musculus
Analyze
Symbol: 1700100L14Rik
Name: RIKEN cDNA 1700100L14 gene
RGD ID: 1610274
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC73584; uncharacterized protein LOC73584
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391370,721,360 - 70,724,223 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1370,721,360 - 70,724,229 (+)EnsemblGRCm39 Ensembl
GRCm381370,573,241 - 70,576,104 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1370,573,241 - 70,576,110 (+)EnsemblGRCm38mm10GRCm38
Celera1372,915,960 - 72,918,845 (+)NCBICelera
Cytogenetic Map13C1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in 1700100L14Rik
102 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132061551272385189Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
1300862Cfbw5_mcystic fibrosis body weight 5 (mouse)Not determined133872035872720517Mouse
1300985Bmd13_mbone mineral density 13 (mouse)Not determined133962924973629397Mouse
1302157Bwem2_mbody weight day 30 males 2 (mouse)Not determined133962924973629397Mouse
1301801Cpfd5_mcerebellum pattern fissures (mouse)Not determined133962924973629397Mouse
15039353Nmrs35_mNAFLD-associated magnetic resonance shift 35 (mouse)134058825374588253Mouse
1300668Pas10_mpulmonary adenoma susceptibility 10 (mouse)Not determined134148904275489158Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
26884396Humsd4_mhumerus midshaft diameter 4, 10 week (mouse)134785347673148119Mouse
4142372Moo2_mmodifier of Odc2 (mouse)Not determinedX5031841184318559Mouse
1301666Eae13_msusceptibility to experimental allergic encephalomyelitis 13 (mouse)Not determined135031841184318559Mouse
1300573Elsgp2_melevated serum gp70 2 (mouse)Not determined135061682884617027Mouse
14746975Manh74_mmandible shape 74 (mouse)135247726986477269Mouse
1302073Pgct1_mprimordial germ cell tumor locus 1 (mouse)Not determined135382078387820897Mouse
1357563Bmch6_mbone mechanical trait 6 (mouse)Not determined135538498089385140Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse
4140959W10q17_mweight 10 weeks QTL 17 (mouse)Not determined55720354112431103Mouse
4141992W6q16_mweight 6 weeks QTL 16 (mouse)Not determined55720354112431103Mouse
4142241Tailq3_mtail length QTL 3 (mouse)Not determined55720354112431103Mouse
1558850Sgp3_mserum gp70 production 3 (mouse)Not determined135647045676971314Mouse
10402414Sgp5_mserum gp70 production 5 (mouse)Not determined1356470456105422186Mouse
1357553Cia28_mcollagen induced arthritis 28 (mouse)Not determined135662924996239162Mouse
10412163Wra1_mwheel running activity 1 (mouse)Not determined135913260093132738Mouse
1300941Skl6_mskeletal size (tail length) 6 (mouse)Not determined136425082198250945Mouse
1301949Skull20_mskull morphology 20 (mouse)Not determined136425082198250945Mouse
1301445Listr2_mlisteriosis resistance 2 (mouse)Not determined1366744601100744746Mouse
1301593Heal8_mwound healing/regeneration 8 (mouse)Not determined1368053999102054119Mouse
14696726Kidrq3_mkidney weight, right QTL 3 (mouse)1368217066102217066Mouse
14747007Mancz11_mmandible centroid size 11 (mouse)1370111284104111284Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000187681
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1370,721,360 - 70,724,229 (+)Ensembl
GRCm38.p6 Ensembl1370,573,241 - 70,576,110 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189028
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1370,721,399 - 70,724,224 (+)Ensembl
GRCm38.p6 Ensembl1370,573,280 - 70,576,105 (+)Ensembl
RefSeq Acc Id: NR_045934
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391370,721,360 - 70,724,223 (+)NCBI
GRCm381370,573,241 - 70,576,104 (+)ENTREZGENE
Celera1372,915,960 - 72,918,845 (+)ENTREZGENE
cM Map13 ENTREZGENE
Sequence:
Promoters
RGD ID:8680776
Promoter ID:EPDNEW_M18419
Type:initiation region
Name:1700100L14Rik_1
Description:Mus musculus RIKEN cDNA 1700100L14 gene , long non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381370,573,234 - 70,573,294EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000101051 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000187681 ENTREZGENE
MGD MGI:1920834 ENTREZGENE
NCBI Gene 73584 ENTREZGENE
PhenoGen 1700100L14Rik PhenoGen
RNAcentral URS000075DED7 RNACentral