1700047M11Rik (RIKEN cDNA 1700047M11 gene) - Rat Genome Database

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Gene: 1700047M11Rik (RIKEN cDNA 1700047M11 gene) Mus musculus
Analyze
Symbol: 1700047M11Rik
Name: RIKEN cDNA 1700047M11 gene
RGD ID: 1608846
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391182,128,399 - 182,130,854 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1182,115,435 - 182,130,890 (+)EnsemblGRCm39 Ensembl
GRCm381182,300,834 - 182,303,289 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1182,287,990 - 182,303,325 (+)EnsemblGRCm38mm10GRCm38
MGSCv371184,230,965 - 184,233,420 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361184,230,965 - 184,233,420 (+)NCBIMGSCv36mm8
Celera1189,343,211 - 189,345,663 (+)NCBICelera
Cytogenetic Map1H5NCBI
cM Map184.93NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
1700047M11RikMousebiological_process involved_inND 2290270 MGIGO_REF:0000015

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
1700047M11RikMousecellular_component is_active_inND 2290270 MGIGO_REF:0000015

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
1700047M11RikMousemolecular_function enablesND 2290270 MGIGO_REF:0000015

PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073   PMID:24200680   PMID:24316575   PMID:27899360  



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Variants in 1700047M11Rik
124 total Variants

1 to 10 of 83 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157456299191456436Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155526796189526897Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1167954584195154279Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152132744186132744Mouse
1301652Cpfd2_mcerebellum pattern fissures (mouse)Not determined1172303451195154279Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160097157194097157Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
4142389Scfr1_mstem cell frequency regulator 1 (mouse)Not determined171632048189303617Mouse

1 to 10 of 83 rows






Ensembl Acc Id: ENSMUST00000185216
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,287 - 182,130,890 (+)Ensembl
GRCm38.p6 Ensembl1182,300,834 - 182,303,287 (+)Ensembl
Ensembl Acc Id: ENSMUST00000189594
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,506 - 182,130,890 (+)Ensembl
GRCm38.p6 Ensembl1182,287,990 - 182,303,325 (+)Ensembl
Ensembl Acc Id: ENSMUST00000241209
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,506 - 182,130,861 (+)Ensembl
Ensembl Acc Id: ENSMUST00000244661
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,495 - 182,130,872 (+)Ensembl
Ensembl Acc Id: ENSMUST00000246234
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,495 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000246608
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,609 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301789
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,435 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301790
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,472 - 182,130,858 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301791
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,506 - 182,130,890 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301792
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,480 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301793
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,488 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301794
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,483 - 182,130,846 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301795
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,530 - 182,130,890 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301796
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,504 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301797
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,506 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301798
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,506 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301799
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,506 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301800
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,506 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301801
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,525 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301802
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,544 - 182,130,872 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301803
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,542 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301804
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,506 - 182,130,811 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301805
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,509 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301806
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,555 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301807
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,555 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301808
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,558 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301809
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,555 - 182,130,843 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301810
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,606 - 182,130,886 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301811
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,583 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301812
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,609 - 182,130,876 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301813
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,598 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301814
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,555 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301815
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,558 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301816
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,607 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,609 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301818
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,609 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301819
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,609 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301820
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,610 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301821
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,615 - 182,130,858 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301822
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,615 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301823
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,615 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301824
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,615 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301825
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,619 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301826
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,583 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301827
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,593 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,606 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301829
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,607 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301830
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,609 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301831
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,659 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301832
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,615 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301833
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,664 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,660 - 182,130,846 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301835
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,661 - 182,130,846 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301836
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,679 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301837
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,690 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301838
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,659 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301839
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,660 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301840
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,661 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301841
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,664 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301842
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,665 - 182,130,811 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,115,679 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,126,364 - 182,130,872 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301845
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,481 - 182,130,862 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301846
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,531 - 182,130,862 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,528 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301848
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,551 - 182,130,858 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301849
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,554 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301850
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,757 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301851
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,793 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301852
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,128,790 - 182,130,813 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301853
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,129,497 - 182,130,890 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301854
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,129,487 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,129,497 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301856
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,129,507 - 182,130,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301857
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,129,508 - 182,130,819 (+)Ensembl
Ensembl Acc Id: ENSMUST00000301858
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1182,129,504 - 182,130,813 (+)Ensembl
RefSeq Acc Id: NR_015458
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391182,128,399 - 182,130,854 (+)NCBI
GRCm381182,300,834 - 182,303,289 (+)ENTREZGENE
MGSCv371184,230,965 - 184,233,420 (+)RGD
Celera1189,343,211 - 189,345,663 (+)RGD
cM Map1 ENTREZGENE
Sequence:


1 to 12 of 12 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000100147 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000185216 ENTREZGENE
MGD MGI:1914580 ENTREZGENE
NCBI Gene 67330 ENTREZGENE
PhenoGen 1700047M11Rik PhenoGen
RNAcentral URS000075D95C RNACentral
  URS00007823DD RNACentral
  URS0000811802 RNACentral
  URS00025E8BAC RNACentral
  URS00025EA529 RNACentral
  URS00025F127C RNACentral
  URS00025F56DF RNACentral
1 to 12 of 12 rows