4930424E08Rik (RIKEN cDNA 4930424E08 gene) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: 4930424E08Rik (RIKEN cDNA 4930424E08 gene) Mus musculus
Analyze
Symbol: 4930424E08Rik (Ensembl: Gm49008)
Name: RIKEN cDNA 4930424E08 gene (Ensembl:predicted gene, 49008)
RGD ID: 1608717
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: hypothetical protein LOC73864; uncharacterized protein LOC73864
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914120,874,434 - 120,875,630 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14120,870,275 - 120,923,989 (+)EnsemblGRCm39 Ensembl
GRCm3814120,637,022 - 120,638,218 (+)NCBIGRCm38GRCm38mm10GRCm38
Celera14119,188,860 - 119,190,056 (+)NCBICelera
Cytogenetic Map14E4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
4930424E08RikMousebiological_process involved_inND 2290270 MGIGO_REF:0000015

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
4930424E08RikMousecellular_component is_active_inND 2290270 MGIGO_REF:0000015

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
4930424E08RikMousemolecular_function enablesND 2290270 MGIGO_REF:0000015

PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  



.

.
Variants in 4930424E08Rik
55 total Variants

The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
14700789Mencq8_mmeniscus calcification QTL 8 (mouse)14120299412121109412Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse
10755523Hgb2_mhemoglobin 2 (mouse)14105884654125139656Mouse
RefSeq Transcripts XR_383786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC164304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK015194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000226920
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14120,870,374 - 120,898,262 (+)Ensembl
Ensembl Acc Id: ENSMUST00000321895
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14120,870,275 - 120,923,989 (+)Ensembl
Ensembl Acc Id: ENSMUST00000321896
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14120,870,322 - 120,875,635 (+)Ensembl
Ensembl Acc Id: ENSMUST00000321897
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14120,874,385 - 120,875,635 (+)Ensembl
Ensembl Acc Id: ENSMUST00000321898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14120,874,385 - 120,875,635 (+)Ensembl
RefSeq Acc Id: XR_383786
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914120,874,434 - 120,875,630 (+)NCBI
GRCm3814120,637,022 - 120,638,218 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000115648 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000321897 ENTREZGENE
MGD MGI:1921114 ENTREZGENE
NCBI Gene 4930424E08Rik ENTREZGENE
PhenoGen 4930424E08Rik PhenoGen