4930547E14Rik (RIKEN cDNA 4930547E14 gene) - Rat Genome Database

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Gene: 4930547E14Rik (RIKEN cDNA 4930547E14 gene) Mus musculus
Analyze
Symbol: 4930547E14Rik
Name: RIKEN cDNA 4930547E14 gene
RGD ID: 1608677
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: PREDICTED
Previously known as: hypothetical protein LOC75145
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391659,457,308 - 59,493,356 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1659,457,301 - 59,493,366 (+)EnsemblGRCm39 Ensembl
GRCm381659,636,945 - 59,672,993 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1659,636,945 - 59,672,999 (+)EnsemblGRCm38mm10GRCm38
Celera1659,988,289 - 60,024,713 (+)NCBICelera
Cytogenetic Map16C1.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
4930547E14RikMousebiological_process involved_inND 2290270 MGIGO_REF:0000015

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
4930547E14RikMousecellular_component is_active_inND 2290270 MGIGO_REF:0000015

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
4930547E14RikMousemolecular_function enablesND 2290270 MGIGO_REF:0000015

PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  



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Variants in 4930547E14Rik
1049 total Variants

1 to 10 of 23 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162879281362792952Mouse
1301138Pcd4ts3_mp-glycoprotein positive CD4 T cell subset 3 (mouse)Not determined164059392374594076Mouse
1301394Eae11_msusceptibility to experimental allergic encephalomyelitis 11 (mouse)Not determined165356189187562035Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
4141212Imraq3_mimmune response to AAV2 QTL 3 (mouse)Not determined164438335078383506Mouse
1558836Dice1b_mdetermination of interleukin 4 commitment 1b (mouse)Not determined164551100072274485Mouse
1301719Remslp3_mrapid eye movement sleep 3 (mouse)Not determined164438335078383506Mouse
1357778Diobq_mdiet-induced obesity QTL (mouse)Not determined164219781782331174Mouse

1 to 10 of 23 rows
Epha6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381659,653,510 - 59,653,901UniSTSGRCm38
MGSCv371659,653,336 - 59,653,727UniSTSGRCm37
Celera1660,004,742 - 60,005,133UniSTS
Cytogenetic Map16C1.3UniSTS
cM Map16 UniSTS







Ensembl Acc Id: ENSMUST00000232158
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,457,306 - 59,493,366 (+)Ensembl
GRCm38.p6 Ensembl1659,636,945 - 59,672,993 (+)Ensembl
Ensembl Acc Id: ENSMUST00000232302
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,518 - 59,493,366 (+)Ensembl
GRCm38.p6 Ensembl1659,639,209 - 59,672,999 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,457,301 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364712
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,457,305 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364713
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,457,306 - 59,493,364 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364714
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,535 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364715
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,537 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364716
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,549 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364717
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,555 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364718
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,556 - 59,493,362 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364719
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,568 - 59,493,363 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364720
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,605 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364721
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,769 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364722
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,771 - 59,493,366 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364723
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,825 - 59,493,364 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364724
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,828 - 59,493,361 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364725
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,828 - 59,493,355 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364726
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,828 - 59,482,846 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364727
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,550 - 59,478,856 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364728
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,831 - 59,478,872 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364729
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,807 - 59,461,641 (+)Ensembl
Ensembl Acc Id: ENSMUST00000364730
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1659,459,572 - 59,460,847 (+)Ensembl
RefSeq Acc Id: NR_040564
RefSeq Status: PREDICTED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391659,457,308 - 59,493,356 (+)NCBI
GRCm381659,636,945 - 59,672,993 (+)ENTREZGENE
Celera1659,988,289 - 60,024,713 (+)ENTREZGENE
cM Map16 ENTREZGENE
Sequence:
RGD ID:15094698
Promoter ID:EPDNEWNC_M2614
Type:multiple initiation site
Name:4930547E14Rik_1
Description:RIKEN cDNA 4930547E14 gene [Source:MGISymbol;Acc:MGI:1922395]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381659,639,199 - 59,639,259EPDNEWNC


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000116894 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000232158 ENTREZGENE
MGD MGI:1922395 ENTREZGENE
NCBI Gene 75145 ENTREZGENE
PhenoGen 4930547E14Rik PhenoGen
RNAcentral URS0000759A53 RNACentral
  URS0000D6F6A2 RNACentral