KRT8P19 (keratin 8 pseudogene 19) - Rat Genome Database

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Gene: KRT8P19 (keratin 8 pseudogene 19) Homo sapiens
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Symbol: KRT8P19
Name: keratin 8 pseudogene 19
RGD ID: 1606615
HGNC Page HGNC:33371
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: KRT8  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381261,879,244 - 61,880,972 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1261,879,318 - 61,880,772 (+)EnsemblGRCh38hg38GRCh38
GRCh371262,273,025 - 62,274,753 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361260,559,366 - 60,560,820 (+)NCBINCBI36Build 36hg18NCBI36
Celera1261,942,184 - 61,943,912 (+)NCBICelera
Cytogenetic Map12q14.1NCBI
HuRef1259,323,940 - 59,325,667 (+)NCBIHuRef
CHM1_11262,240,874 - 62,242,602 (+)NCBICHM1_1
T2T-CHM13v2.01261,858,126 - 61,859,854 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

Predicted Target Of
Summary Value
Count of predictions:361
Count of miRNA genes:325
Interacting mature miRNAs:354
Transcripts:ENST00000551916
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

RH119739  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371262,270,295 - 62,270,567UniSTSGRCh37
Build 361260,556,562 - 60,556,834RGDNCBI36
Celera1261,939,454 - 61,939,726RGD
Cytogenetic Map12q14.1UniSTS
HuRef1259,321,432 - 59,321,704UniSTS
TNG Radiation Hybrid Map1229515.0UniSTS
WI-3818  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371262,268,234 - 62,268,433UniSTSGRCh37
Build 361260,554,501 - 60,554,700RGDNCBI36
Celera1261,937,393 - 61,937,592RGD
Cytogenetic Map12q14.1UniSTS
HuRef1259,319,371 - 59,319,570UniSTS
Whitehead-RH Map12368.8UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
sensory system
99 215 171 190 682 150 167 1 30 134 10 202 517 519 557 59 274 133 21


RefSeq Transcripts NG_009706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC020647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000551916
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1261,879,318 - 61,880,772 (+)Ensembl


Database
Acc Id
Source(s)
COSMIC KRT8P19 COSMIC
Ensembl Genes ENSG00000257528 Ensembl, ENTREZGENE
GTEx ENSG00000257528 GTEx
HGNC ID HGNC:33371 ENTREZGENE
Human Proteome Map KRT8P19 Human Proteome Map
NCBI Gene 644998 ENTREZGENE