ZNF321P (zinc finger protein 321, pseudogene) - Rat Genome Database

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Gene: ZNF321P (zinc finger protein 321, pseudogene) Homo sapiens
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Symbol: ZNF321P
Name: zinc finger protein 321, pseudogene
RGD ID: 1605491
HGNC Page HGNC:13827
Description: INTERACTS WITH arsane; arsenic atom; carbamazepine
Type: pseudo (Ensembl: transcribed_processed_pseudogene)
RefSeq Status: VALIDATED
Previously known as: DKFZp781C2298; FLJ39509; KRAB domain-containing protein ZNF321; MGC35402; zinc finger protein 321; ZNF321
Related Functional Gene: ZNF845  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381952,927,135 - 52,942,594 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1952,928,903 - 52,929,397 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl1952,927,135 - 52,942,601 (-)EnsemblGRCh38hg38GRCh38
GRCh371953,430,388 - 53,445,847 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361958,122,200 - 58,137,659 (-)NCBINCBI36Build 36hg18NCBI36
Celera1950,477,950 - 50,493,409 (-)NCBICelera
Cytogenetic Map19q13.41NCBI
HuRef1949,756,286 - 49,772,030 (-)NCBIHuRef
CHM1_11953,432,179 - 53,447,652 (-)NCBICHM1_1
T2T-CHM13v2.01956,009,652 - 56,025,126 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:14702039   PMID:15489334   PMID:17974005   PMID:33961781  


Genomics

Variants

.
Variants in ZNF321P
11 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:115
Count of miRNA genes:95
Interacting mature miRNAs:98
Transcripts:ENST00000391777
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1559110SCL22_HSerum cholesterol level QTL 22 (human)3.590.000241Lipid levelLDL cholesterol193190759457907594Human
1331657COPD9_HChronic obstructive pulmonary disease QTL 9 (human)1.94Chronic airflow obstructionpost-bronchodilator FEV1193102176057021760Human

Markers in Region
GDB:631813  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map11p12UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map5q11.2-q13.1UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map3p21.33UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map2p23.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map19qUniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map19p13.3UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2386 2785 2250 4898 1518 2070 6 448 1817 289 2242 6784 6311 53 3686 1 683 1649 1521 174 1

Sequence


Ensembl Acc Id: ENST00000313956
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1952,927,135 - 52,942,601 (-)Ensembl
Ensembl Acc Id: ENST00000550843
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1952,928,903 - 52,929,397 (-)Ensembl
Ensembl Acc Id: ENST00000818491
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1952,941,768 - 52,942,601 (-)Ensembl
RefSeq Acc Id: NR_037805
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381952,927,135 - 52,942,594 (-)NCBI
GRCh371953,430,388 - 53,445,847 (-)ENTREZGENE
HuRef1949,756,286 - 49,772,030 (-)ENTREZGENE
CHM1_11953,432,179 - 53,447,652 (-)NCBI
T2T-CHM13v2.01956,009,652 - 56,025,126 (-)NCBI
Sequence:

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8N8H1-F1-model_v2 AlphaFold Q8N8H1 1-164 view protein structure

Promoters
RGD ID:6796315
Promoter ID:HG_KWN:30795
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_203307
Position:
Human AssemblyChrPosition (strand)Source
Build 361958,137,311 - 58,137,811 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
COSMIC ZNF321P COSMIC
Ensembl Genes ENSG00000213801 Ensembl
  ENSG00000293246 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000313956 ENTREZGENE
GTEx ENSG00000213801 GTEx
  ENSG00000293246 GTEx
HGNC ID HGNC:13827 ENTREZGENE
Human Proteome Map ZNF321P Human Proteome Map
NCBI Gene ZNF321P ENTREZGENE
PharmGKB PA37816 PharmGKB
UniProt Q8N8H1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 ZNF321P  zinc finger protein 321, pseudogene  ZNF321  zinc finger protein 321  Symbol and/or name change 5135510 APPROVED