KRT8P9 (keratin 8 pseudogene 9) - Rat Genome Database

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Gene: KRT8P9 (keratin 8 pseudogene 9) Homo sapiens
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Symbol: KRT8P9
Name: keratin 8 pseudogene 9
RGD ID: 1605194
HGNC Page HGNC:33363
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: KRT8  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381570,858,637 - 70,860,362 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1570,858,714 - 70,860,162 (+)EnsemblGRCh38hg38GRCh38
GRCh371571,150,976 - 71,152,701 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361568,938,036 - 68,939,555 (+)NCBINCBI36Build 36hg18NCBI36
Celera1548,041,875 - 48,043,600 (+)NCBICelera
Cytogenetic Map15q23NCBI
HuRef1547,986,527 - 47,988,252 (+)NCBIHuRef
CHM1_11571,269,240 - 71,270,966 (+)NCBICHM1_1
T2T-CHM13v2.01568,681,601 - 68,683,327 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

Predicted Target Of
Summary Value
Count of predictions:383
Count of miRNA genes:337
Interacting mature miRNAs:372
Transcripts:ENST00000558927
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

RH11335  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371571,150,347 - 71,150,472UniSTSGRCh37
Build 361568,937,401 - 68,937,526RGDNCBI36
Celera1548,041,246 - 48,041,371RGD
Cytogenetic Map15q23UniSTS
HuRef1547,985,898 - 47,986,023UniSTS
D8S1691  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371571,150,348 - 71,150,430UniSTSGRCh37
Build 361568,937,402 - 68,937,484RGDNCBI36
Celera1548,041,247 - 48,041,329RGD
Cytogenetic Map15q23UniSTS
HuRef1547,985,899 - 47,985,981UniSTS
D15S893  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371571,150,285 - 71,150,485UniSTSGRCh37
Build 361568,937,339 - 68,937,539RGDNCBI36
Celera1548,041,184 - 48,041,384RGD
Cytogenetic Map15q23UniSTS
HuRef1547,985,836 - 47,986,036UniSTS
GeneMap99-GB4 RH Map15249.12UniSTS
Whitehead-RH Map15243.4UniSTS
Whitehead-YAC Contig Map15 UniSTS
NCBI RH Map15453.3UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
424 1032 828 779 1147 670 981 198 195 121 550 1897 1716 21 1050 273 783 757 83



Ensembl Acc Id: ENST00000558927
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1570,858,714 - 70,860,162 (+)Ensembl
RefSeq Acc Id: XR_017231
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
Build 361568,938,036 - 68,939,555 (+)NCBI Archive


Database
Acc Id
Source(s)
COSMIC KRT8P9 COSMIC
Ensembl Genes ENSG00000259470 Ensembl, ENTREZGENE
GTEx ENSG00000259470 GTEx
HGNC ID HGNC:33363 ENTREZGENE
Human Proteome Map KRT8P9 Human Proteome Map
NCBI Gene 390601 ENTREZGENE