LMBR1L (limb development membrane protein 1 like) - Rat Genome Database

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Gene: LMBR1L (limb development membrane protein 1 like) Homo sapiens
Analyze
Symbol: LMBR1L
Name: limb development membrane protein 1 like
RGD ID: 1603995
HGNC Page HGNC:18268
Description: Enables transmembrane signaling receptor activity. Involved in receptor-mediated endocytosis and signal transduction. Located in endoplasmic reticulum membrane and plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FLJ10494; FLJ36251; KIAA1174; limb development membrane protein 1 like-protein; limb development membrane protein 1-like; limb region 1 homolog-like; limb region 1 protein homolog-like; limb region 1-like protein -like; LIMR; lipocalin-1 interacting membrane receptor; lipocalin-1-interacting membrane receptor; lipocalin-interacting membrane receptor
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381249,097,139 - 49,110,847 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1249,097,136 - 49,110,900 (-)EnsemblGRCh38hg38GRCh38
GRCh371249,490,922 - 49,504,630 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361247,777,189 - 47,790,947 (-)NCBINCBI36Build 36hg18NCBI36
Celera1248,285,709 - 48,299,467 (-)NCBICelera
Cytogenetic Map12q13.12NCBI
HuRef1246,521,993 - 46,535,753 (-)NCBIHuRef
CHM1_11249,456,235 - 49,470,132 (-)NCBICHM1_1
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10574461   PMID:11287427   PMID:12477932   PMID:12591932   PMID:12975309   PMID:14702039   PMID:15489334   PMID:16344560   PMID:16423471   PMID:17991420   PMID:19136951   PMID:20446115  
PMID:21516116   PMID:21791187   PMID:21873635   PMID:23964685   PMID:26638075   PMID:26871637   PMID:27432908   PMID:31073040   PMID:32513696   PMID:33961781   PMID:35146515   PMID:35156780  


Genomics

Comparative Map Data
LMBR1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381249,097,139 - 49,110,847 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1249,097,136 - 49,110,900 (-)EnsemblGRCh38hg38GRCh38
GRCh371249,490,922 - 49,504,630 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361247,777,189 - 47,790,947 (-)NCBINCBI36Build 36hg18NCBI36
Celera1248,285,709 - 48,299,467 (-)NCBICelera
Cytogenetic Map12q13.12NCBI
HuRef1246,521,993 - 46,535,753 (-)NCBIHuRef
CHM1_11249,456,235 - 49,470,132 (-)NCBICHM1_1
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBIT2T-CHM13v2.0
Lmbr1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391598,801,798 - 98,815,944 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1598,801,798 - 98,816,112 (-)EnsemblGRCm39 Ensembl
GRCm381598,903,918 - 98,918,098 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1598,903,917 - 98,918,231 (-)EnsemblGRCm38mm10GRCm38
MGSCv371598,734,352 - 98,748,529 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361598,731,955 - 98,746,132 (-)NCBIMGSCv36mm8
Celera15101,053,500 - 101,067,677 (-)NCBICelera
Cytogenetic Map15F1NCBI
cM Map1555.1NCBI
Lmbr1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87131,940,081 - 131,958,832 (-)NCBIGRCr8
mRatBN7.27130,061,136 - 130,078,101 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7130,061,136 - 130,076,381 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7131,866,544 - 131,881,784 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07134,092,106 - 134,107,346 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07134,004,617 - 134,019,857 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07140,585,512 - 140,600,797 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7140,585,832 - 140,600,818 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X115,090,815 - 115,107,826 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47137,683,441 - 137,692,537 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17137,759,902 - 137,768,974 (-)NCBI
Celera7126,552,541 - 126,561,639 (-)NCBICelera
Cytogenetic Map7q36NCBI
Lmbr1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555007,921,233 - 7,934,538 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555007,922,422 - 7,934,538 (-)NCBIChiLan1.0ChiLan1.0
LMBR1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21045,073,683 - 45,088,075 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11245,070,444 - 45,084,836 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01239,639,957 - 39,653,736 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11240,519,746 - 40,533,435 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1240,519,746 - 40,533,435 (+)Ensemblpanpan1.1panPan2
LMBR1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1275,475,632 - 5,488,456 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl275,475,658 - 5,487,978 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2740,769,055 - 40,781,876 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0275,526,748 - 5,539,570 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl275,526,933 - 5,539,567 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1275,490,998 - 5,503,814 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0275,480,920 - 5,493,521 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02741,161,667 - 41,174,498 (-)NCBIUU_Cfam_GSD_1.0
Lmbr1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494566,254,281 - 66,272,032 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365126,892,801 - 6,910,576 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365126,892,798 - 6,910,576 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LMBR1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl515,121,554 - 15,135,252 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1515,121,550 - 15,137,625 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2515,480,564 - 15,494,714 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LMBR1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11145,338,090 - 45,355,551 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1145,337,977 - 45,355,812 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037200,790,166 - 200,803,727 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lmbr1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248163,078,152 - 3,094,252 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248163,078,299 - 3,094,010 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in LMBR1L
30 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 copy number gain See cases [RCV000258805] Chr12:1..133851895 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic|likely pathogenic
GRCh37/hg19 12p11.21-q13.12(chr12:31886971-50360461)x3 copy number gain See cases [RCV000207454] Chr12:31886971..50360461 [GRCh37]
Chr12:12p11.21-q13.12
pathogenic
GRCh37/hg19 12q11-13.12(chr12:37857750-49791459)x3 copy number gain See cases [RCV000448835] Chr12:37857750..49791459 [GRCh37]
Chr12:12q11-13.12
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 copy number gain See cases [RCV000510482] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) copy number gain See cases [RCV000511643] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_018113.4(LMBR1L):c.15C>A (p.Asp5Glu) single nucleotide variant not specified [RCV004301821] Chr12:49110541 [GRCh38]
Chr12:49504324 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.667G>A (p.Val223Ile) single nucleotide variant not specified [RCV004331802] Chr12:49102916 [GRCh38]
Chr12:49496699 [GRCh37]
Chr12:12q13.12
uncertain significance
GRCh37/hg19 12q13.12(chr12:49191810-49630201)x3 copy number gain not provided [RCV000683434] Chr12:49191810..49630201 [GRCh37]
Chr12:12q13.12
uncertain significance
NC_000012.11:g.26370251_54361538inv inversion not specified [RCV000714265] Chr12:26370251..54361538 [GRCh37]
Chr12:12p12.1-q13.13
uncertain significance
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 copy number gain not provided [RCV000750246] Chr12:191619..133777645 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 copy number gain not provided [RCV000750253] Chr12:621220..133779118 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_018113.4(LMBR1L):c.947T>C (p.Ile316Thr) single nucleotide variant not specified [RCV004296233] Chr12:49101533 [GRCh38]
Chr12:49495316 [GRCh37]
Chr12:12q13.12
uncertain significance
GRCh37/hg19 12q13.11-13.12(chr12:49024019-50299974)x3 copy number gain not provided [RCV001259140] Chr12:49024019..50299974 [GRCh37]
Chr12:12q13.11-13.12
uncertain significance
GRCh37/hg19 12q11-13.12(chr12:37873948-49578619)x3 copy number gain See cases [RCV001353185] Chr12:37873948..49578619 [GRCh37]
Chr12:12q11-13.12
likely pathogenic
NM_018113.4(LMBR1L):c.863G>A (p.Arg288Gln) single nucleotide variant DSD incomplete virilization [RCV001849542] Chr12:49102187 [GRCh38]
Chr12:49495970 [GRCh37]
Chr12:12q13.12
likely pathogenic
NM_018113.4(LMBR1L):c.862C>T (p.Arg288Trp) single nucleotide variant DSD incomplete virilization [RCV001849543] Chr12:49102188 [GRCh38]
Chr12:49495971 [GRCh37]
Chr12:12q13.12
likely pathogenic
NM_018113.4(LMBR1L):c.115A>G (p.Ile39Val) single nucleotide variant DSD incomplete virilization [RCV001849544] Chr12:49107003 [GRCh38]
Chr12:49500786 [GRCh37]
Chr12:12q13.12
uncertain significance
GRCh37/hg19 12q11-13.12(chr12:37857750-49791459) copy number gain not specified [RCV002052988] Chr12:37857750..49791459 [GRCh37]
Chr12:12q11-13.12
pathogenic
NM_018113.4(LMBR1L):c.1336C>T (p.Leu446Phe) single nucleotide variant not specified [RCV004082481] Chr12:49098010 [GRCh38]
Chr12:49491793 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1169C>T (p.Thr390Met) single nucleotide variant not specified [RCV004205551] Chr12:49100560 [GRCh38]
Chr12:49494343 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1432G>A (p.Gly478Ser) single nucleotide variant not specified [RCV004233369] Chr12:49097710 [GRCh38]
Chr12:49491493 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1156G>A (p.Asp386Asn) single nucleotide variant not specified [RCV004187633] Chr12:49100573 [GRCh38]
Chr12:49494356 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.190G>A (p.Ala64Thr) single nucleotide variant not specified [RCV004097009] Chr12:49105925 [GRCh38]
Chr12:49499708 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1103T>C (p.Val368Ala) single nucleotide variant not specified [RCV004095551] Chr12:49100626 [GRCh38]
Chr12:49494409 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.946A>G (p.Ile316Val) single nucleotide variant not specified [RCV004076380] Chr12:49101534 [GRCh38]
Chr12:49495317 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.434A>G (p.Lys145Arg) single nucleotide variant not specified [RCV004136551] Chr12:49104449 [GRCh38]
Chr12:49498232 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.242T>G (p.Leu81Arg) single nucleotide variant not specified [RCV004123510] Chr12:49104835 [GRCh38]
Chr12:49498618 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.64G>C (p.Glu22Gln) single nucleotide variant not specified [RCV004077778] Chr12:49110492 [GRCh38]
Chr12:49504275 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.719A>G (p.Gln240Arg) single nucleotide variant not specified [RCV004273440] Chr12:49102518 [GRCh38]
Chr12:49496301 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.64G>A (p.Glu22Lys) single nucleotide variant not specified [RCV004286941] Chr12:49110492 [GRCh38]
Chr12:49504275 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.155C>T (p.Thr52Ile) single nucleotide variant not specified [RCV004253216] Chr12:49106963 [GRCh38]
Chr12:49500746 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.359C>T (p.Ser120Phe) single nucleotide variant not specified [RCV004276773] Chr12:49104524 [GRCh38]
Chr12:49498307 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1150T>A (p.Trp384Arg) single nucleotide variant not specified [RCV004351320] Chr12:49100579 [GRCh38]
Chr12:49494362 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.998G>A (p.Arg333Gln) single nucleotide variant not specified [RCV004363495] Chr12:49101482 [GRCh38]
Chr12:49495265 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1378C>T (p.Arg460Trp) single nucleotide variant not specified [RCV004342646] Chr12:49097968 [GRCh38]
Chr12:49491751 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1414C>G (p.Leu472Val) single nucleotide variant not specified [RCV004365441] Chr12:49097728 [GRCh38]
Chr12:49491511 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1209C>G (p.Ser403Arg) single nucleotide variant not specified [RCV004407578] Chr12:49100419 [GRCh38]
Chr12:49494202 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1229C>T (p.Ser410Phe) single nucleotide variant not specified [RCV004407579] Chr12:49100399 [GRCh38]
Chr12:49494182 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.1437C>A (p.Phe479Leu) single nucleotide variant not specified [RCV004407580] Chr12:49097705 [GRCh38]
Chr12:49491488 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.925C>G (p.Leu309Val) single nucleotide variant not specified [RCV004407583] Chr12:49102125 [GRCh38]
Chr12:49495908 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.476T>C (p.Met159Thr) single nucleotide variant not specified [RCV004407581] Chr12:49103773 [GRCh38]
Chr12:49497556 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.757C>T (p.Arg253Cys) single nucleotide variant not specified [RCV004407582] Chr12:49102480 [GRCh38]
Chr12:49496263 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.578A>G (p.Tyr193Cys) single nucleotide variant not specified [RCV004637195] Chr12:49103144 [GRCh38]
Chr12:49496927 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.241C>T (p.Leu81Phe) single nucleotide variant not specified [RCV004637196] Chr12:49104836 [GRCh38]
Chr12:49498619 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.208T>C (p.Phe70Leu) single nucleotide variant not specified [RCV004634028] Chr12:49104869 [GRCh38]
Chr12:49498652 [GRCh37]
Chr12:12q13.12
uncertain significance
NM_018113.4(LMBR1L):c.389T>C (p.Phe130Ser) single nucleotide variant not specified [RCV004634029] Chr12:49104494 [GRCh38]
Chr12:49498277 [GRCh37]
Chr12:12q13.12
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:10256
Count of miRNA genes:1231
Interacting mature miRNAs:1628
Transcripts:ENST00000267102, ENST00000395141, ENST00000417750, ENST00000457164, ENST00000547382, ENST00000547670, ENST00000547675, ENST00000547698, ENST00000547813, ENST00000548983, ENST00000549296, ENST00000549429, ENST00000549587, ENST00000549730, ENST00000550137, ENST00000550815, ENST00000550867, ENST00000551115, ENST00000551143, ENST00000551169, ENST00000551272, ENST00000551535, ENST00000551782, ENST00000551854, ENST00000552141, ENST00000552153, ENST00000552449, ENST00000552577, ENST00000552879, ENST00000553040, ENST00000553204
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH93826  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371249,490,995 - 49,491,134UniSTSGRCh37
Build 361247,777,262 - 47,777,401RGDNCBI36
Celera1248,285,782 - 48,285,921RGD
Cytogenetic Map12q13.12UniSTS
HuRef1246,522,066 - 46,522,205UniSTS
GeneMap99-GB4 RH Map12218.85UniSTS
LIMR__7410  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371249,490,805 - 49,491,477UniSTSGRCh37
Build 361247,777,072 - 47,777,744RGDNCBI36
Celera1248,285,592 - 48,286,264RGD
HuRef1246,521,876 - 46,522,548UniSTS
MARC_14539-14540:1008957287:5  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371249,497,498 - 49,498,300UniSTSGRCh37
Build 361247,783,765 - 47,784,567RGDNCBI36
Celera1248,292,285 - 48,293,087RGD
HuRef1246,528,571 - 46,529,373UniSTS
RH103359  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12q13.12UniSTS
GeneMap99-GB4 RH Map12218.92UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4973 1726 2351 6 624 1950 465 2269 7305 6471 53 3734 1 852 1744 1617 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001300750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001300751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002957350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008488640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_245944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB033000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC011603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF260728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF351620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK001356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK001651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK093570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL137599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL556633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY358572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA012883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MW841072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MW841073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000267102   ⟹   ENSP00000267102
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,139 - 49,110,847 (-)Ensembl
Ensembl Acc Id: ENST00000417750   ⟹   ENSP00000394677
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,136 - 49,110,681 (-)Ensembl
Ensembl Acc Id: ENST00000457164   ⟹   ENSP00000413785
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,102,353 - 49,110,850 (-)Ensembl
Ensembl Acc Id: ENST00000547382   ⟹   ENSP00000447329
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,142 - 49,110,850 (-)Ensembl
Ensembl Acc Id: ENST00000547670   ⟹   ENSP00000446718
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,700 - 49,110,877 (-)Ensembl
Ensembl Acc Id: ENST00000547675   ⟹   ENSP00000447240
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,102,476 - 49,110,675 (-)Ensembl
Ensembl Acc Id: ENST00000547698   ⟹   ENSP00000448821
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,145 - 49,101,549 (-)Ensembl
Ensembl Acc Id: ENST00000547813
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,327 - 49,101,658 (-)Ensembl
Ensembl Acc Id: ENST00000548983
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,106,691 - 49,110,847 (-)Ensembl
Ensembl Acc Id: ENST00000549296   ⟹   ENSP00000450032
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,104,499 - 49,110,850 (-)Ensembl
Ensembl Acc Id: ENST00000549429
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,100,759 - 49,101,501 (-)Ensembl
Ensembl Acc Id: ENST00000549587
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,104,494 - 49,105,232 (-)Ensembl
Ensembl Acc Id: ENST00000549730
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,103,103 - 49,106,080 (-)Ensembl
Ensembl Acc Id: ENST00000550137   ⟹   ENSP00000449103
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,104,470 - 49,110,845 (-)Ensembl
Ensembl Acc Id: ENST00000550815   ⟹   ENSP00000448973
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,104,751 - 49,110,677 (-)Ensembl
Ensembl Acc Id: ENST00000550867
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,158 - 49,110,667 (-)Ensembl
Ensembl Acc Id: ENST00000551115
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,106,423 - 49,110,884 (-)Ensembl
Ensembl Acc Id: ENST00000551143
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,098,002 - 49,102,343 (-)Ensembl
Ensembl Acc Id: ENST00000551169   ⟹   ENSP00000448128
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,103,081 - 49,107,011 (-)Ensembl
Ensembl Acc Id: ENST00000551272
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,674 - 49,100,732 (-)Ensembl
Ensembl Acc Id: ENST00000551535
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,106,589 - 49,110,900 (-)Ensembl
Ensembl Acc Id: ENST00000551782   ⟹   ENSP00000449633
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,104,503 - 49,110,886 (-)Ensembl
Ensembl Acc Id: ENST00000551854   ⟹   ENSP00000446641
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,104,474 - 49,110,205 (-)Ensembl
Ensembl Acc Id: ENST00000552141
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,101,920 - 49,103,778 (-)Ensembl
Ensembl Acc Id: ENST00000552153
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,103,687 - 49,110,871 (-)Ensembl
Ensembl Acc Id: ENST00000552449   ⟹   ENSP00000450362
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,100,600 - 49,102,176 (-)Ensembl
Ensembl Acc Id: ENST00000552577
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,137 - 49,104,379 (-)Ensembl
Ensembl Acc Id: ENST00000552879
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,101,103 - 49,103,120 (-)Ensembl
Ensembl Acc Id: ENST00000553040   ⟹   ENSP00000448147
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,097,157 - 49,102,196 (-)Ensembl
Ensembl Acc Id: ENST00000553204
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1249,103,701 - 49,110,693 (-)Ensembl
RefSeq Acc Id: NM_001300750   ⟹   NP_001287679
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
CHM1_11249,456,235 - 49,470,135 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001300751   ⟹   NP_001287680
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
CHM1_11249,456,235 - 49,470,135 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352161   ⟹   NP_001339090
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352162   ⟹   NP_001339091
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352163   ⟹   NP_001339092
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352164   ⟹   NP_001339093
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352165   ⟹   NP_001339094
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352166   ⟹   NP_001339095
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352167   ⟹   NP_001339096
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352168   ⟹   NP_001339097
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: NM_018113   ⟹   NP_060583
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
GRCh371249,490,334 - 49,504,683 (-)NCBI
Build 361247,777,189 - 47,790,947 (-)NCBI Archive
Celera1248,285,709 - 48,299,467 (-)RGD
HuRef1246,521,993 - 46,535,753 (-)RGD
CHM1_11249,456,235 - 49,470,135 (-)NCBI
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024449053   ⟹   XP_024304821
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047429139   ⟹   XP_047285095
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,107,044 (-)NCBI
RefSeq Acc Id: XM_047429140   ⟹   XP_047285096
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,110,847 (-)NCBI
RefSeq Acc Id: XM_047429141   ⟹   XP_047285097
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,101,010 - 49,110,847 (-)NCBI
RefSeq Acc Id: XM_047429142   ⟹   XP_047285098
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,109,786 (-)NCBI
RefSeq Acc Id: XM_047429143   ⟹   XP_047285099
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,097,139 - 49,104,546 (-)NCBI
RefSeq Acc Id: XM_054372530   ⟹   XP_054228505
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01249,059,322 - 49,069,227 (-)NCBI
RefSeq Acc Id: XM_054372531   ⟹   XP_054228506
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
RefSeq Acc Id: XM_054372532   ⟹   XP_054228507
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01249,059,322 - 49,073,030 (-)NCBI
RefSeq Acc Id: XM_054372533   ⟹   XP_054228508
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01249,063,193 - 49,073,030 (-)NCBI
RefSeq Acc Id: XM_054372534   ⟹   XP_054228509
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01249,059,322 - 49,071,969 (-)NCBI
RefSeq Acc Id: XM_054372535   ⟹   XP_054228510
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01249,059,322 - 49,066,729 (-)NCBI
RefSeq Acc Id: XR_008488640
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01249,062,571 - 49,073,030 (-)NCBI
RefSeq Acc Id: XR_245944
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,100,388 - 49,110,847 (-)NCBI
GRCh371249,490,334 - 49,504,683 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001287679 (Get FASTA)   NCBI Sequence Viewer  
  NP_001287680 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339090 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339091 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339092 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339093 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339094 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339095 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339096 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339097 (Get FASTA)   NCBI Sequence Viewer  
  NP_060583 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304821 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285095 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285096 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285097 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285098 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285099 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228505 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228506 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228507 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228508 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228509 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228510 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH08337 (Get FASTA)   NCBI Sequence Viewer  
  AAH15015 (Get FASTA)   NCBI Sequence Viewer  
  AAH31550 (Get FASTA)   NCBI Sequence Viewer  
  AAK60600 (Get FASTA)   NCBI Sequence Viewer  
  AAK63067 (Get FASTA)   NCBI Sequence Viewer  
  AAQ88935 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34169 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34170 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34171 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34172 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34173 (Get FASTA)   NCBI Sequence Viewer  
  BAA86488 (Get FASTA)   NCBI Sequence Viewer  
  BAA91646 (Get FASTA)   NCBI Sequence Viewer  
  BAA91811 (Get FASTA)   NCBI Sequence Viewer  
  BAG60328 (Get FASTA)   NCBI Sequence Viewer  
  BAG60981 (Get FASTA)   NCBI Sequence Viewer  
  CAB70835 (Get FASTA)   NCBI Sequence Viewer  
  EAW58040 (Get FASTA)   NCBI Sequence Viewer  
  EAW58041 (Get FASTA)   NCBI Sequence Viewer  
  EAW58042 (Get FASTA)   NCBI Sequence Viewer  
  EAW58043 (Get FASTA)   NCBI Sequence Viewer  
  EAW58044 (Get FASTA)   NCBI Sequence Viewer  
  EAW58045 (Get FASTA)   NCBI Sequence Viewer  
  EAW58046 (Get FASTA)   NCBI Sequence Viewer  
  EAW58047 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000267102
  ENSP00000267102.8
  ENSP00000394677.1
  ENSP00000413785.2
  ENSP00000446641.1
  ENSP00000446718.1
  ENSP00000447240.1
  ENSP00000447329
  ENSP00000447329.1
  ENSP00000448128.1
  ENSP00000448147.1
  ENSP00000448821.1
  ENSP00000448973.1
  ENSP00000449103.1
  ENSP00000449633.1
  ENSP00000450032.1
  ENSP00000450362.1
GenBank Protein Q6UX01 (Get FASTA)   NCBI Sequence Viewer  
  QVG59798 (Get FASTA)   NCBI Sequence Viewer  
  QVG59799 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_060583   ⟸   NM_018113
- Peptide Label: isoform 1
- UniProtKB: Q9NVU9 (UniProtKB/Swiss-Prot),   Q9NVE1 (UniProtKB/Swiss-Prot),   Q9NT09 (UniProtKB/Swiss-Prot),   Q96HN8 (UniProtKB/Swiss-Prot),   Q96BY8 (UniProtKB/Swiss-Prot),   Q969J4 (UniProtKB/Swiss-Prot),   Q9ULP6 (UniProtKB/Swiss-Prot),   Q6UX01 (UniProtKB/Swiss-Prot),   A0A024R0Y9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001287680   ⟸   NM_001300751
- Peptide Label: isoform 3
- UniProtKB: A0A0S2Z6E3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001287679   ⟸   NM_001300750
- Peptide Label: isoform 2
- Sequence:
RefSeq Acc Id: XP_024304821   ⟸   XM_024449053
- Peptide Label: isoform X3
- UniProtKB: A0A0S2Z5S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001339094   ⟸   NM_001352165
- Peptide Label: isoform 8
- Sequence:
RefSeq Acc Id: NP_001339091   ⟸   NM_001352162
- Peptide Label: isoform 5
- Sequence:
RefSeq Acc Id: NP_001339096   ⟸   NM_001352167
- Peptide Label: isoform 9
- Sequence:
RefSeq Acc Id: NP_001339093   ⟸   NM_001352164
- Peptide Label: isoform 7
- Sequence:
RefSeq Acc Id: NP_001339092   ⟸   NM_001352163
- Peptide Label: isoform 6
- Sequence:
RefSeq Acc Id: NP_001339095   ⟸   NM_001352166
- Peptide Label: isoform 8
- Sequence:
RefSeq Acc Id: NP_001339097   ⟸   NM_001352168
- Peptide Label: isoform 9
- Sequence:
RefSeq Acc Id: NP_001339090   ⟸   NM_001352161
- Peptide Label: isoform 4
- Sequence:
Ensembl Acc Id: ENSP00000267102   ⟸   ENST00000267102
Ensembl Acc Id: ENSP00000447329   ⟸   ENST00000547382
Ensembl Acc Id: ENSP00000448821   ⟸   ENST00000547698
Ensembl Acc Id: ENSP00000447240   ⟸   ENST00000547675
Ensembl Acc Id: ENSP00000446718   ⟸   ENST00000547670
Ensembl Acc Id: ENSP00000450032   ⟸   ENST00000549296
Ensembl Acc Id: ENSP00000394677   ⟸   ENST00000417750
Ensembl Acc Id: ENSP00000413785   ⟸   ENST00000457164
Ensembl Acc Id: ENSP00000448973   ⟸   ENST00000550815
Ensembl Acc Id: ENSP00000449103   ⟸   ENST00000550137
Ensembl Acc Id: ENSP00000448128   ⟸   ENST00000551169
Ensembl Acc Id: ENSP00000446641   ⟸   ENST00000551854
Ensembl Acc Id: ENSP00000449633   ⟸   ENST00000551782
Ensembl Acc Id: ENSP00000450362   ⟸   ENST00000552449
Ensembl Acc Id: ENSP00000448147   ⟸   ENST00000553040
RefSeq Acc Id: XP_047285096   ⟸   XM_047429140
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047285098   ⟸   XM_047429142
- Peptide Label: isoform X5
RefSeq Acc Id: XP_047285095   ⟸   XM_047429139
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047285099   ⟸   XM_047429143
- Peptide Label: isoform X6
RefSeq Acc Id: XP_047285097   ⟸   XM_047429141
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054228507   ⟸   XM_054372532
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054228506   ⟸   XM_054372531
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054228509   ⟸   XM_054372534
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054228505   ⟸   XM_054372530
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054228510   ⟸   XM_054372535
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054228508   ⟸   XM_054372533
- Peptide Label: isoform X4

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6UX01-F1-model_v2 AlphaFold Q6UX01 1-489 view protein structure

Promoters
RGD ID:6790208
Promoter ID:HG_KWN:15545
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000318696,   UC001RTG.2,   UC001RTI.2,   UC009ZLD.1,   UC009ZLE.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361247,790,534 - 47,791,034 (-)MPROMDB
RGD ID:6850744
Promoter ID:EP73166
Type:initiation region
Name:HS_LIMR
Description:Lipocalin-interacting membrane receptor.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:NEDO full length human cDNA sequencing project.; Oligo-capping
Position:
Human AssemblyChrPosition (strand)Source
Build 361247,790,725 - 47,790,785EPD
RGD ID:7223805
Promoter ID:EPDNEW_H17647
Type:initiation region
Name:LMBR1L_2
Description:limb development membrane protein 1 like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H17648  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,110,675 - 49,110,735EPDNEW
RGD ID:7223803
Promoter ID:EPDNEW_H17648
Type:initiation region
Name:LMBR1L_1
Description:limb development membrane protein 1 like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H17647  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381249,110,847 - 49,110,907EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:18268 AgrOrtholog
COSMIC LMBR1L COSMIC
Ensembl Genes ENSG00000139636 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000267102 ENTREZGENE
  ENST00000267102.13 UniProtKB/Swiss-Prot
  ENST00000417750.5 UniProtKB/TrEMBL
  ENST00000457164.6 UniProtKB/TrEMBL
  ENST00000547382 ENTREZGENE
  ENST00000547382.5 UniProtKB/Swiss-Prot
  ENST00000547670.5 UniProtKB/TrEMBL
  ENST00000547675.5 UniProtKB/TrEMBL
  ENST00000547698.5 UniProtKB/TrEMBL
  ENST00000549296.1 UniProtKB/TrEMBL
  ENST00000550137.5 UniProtKB/TrEMBL
  ENST00000550815.1 UniProtKB/TrEMBL
  ENST00000551169.5 UniProtKB/TrEMBL
  ENST00000551782.5 UniProtKB/TrEMBL
  ENST00000551854.5 UniProtKB/TrEMBL
  ENST00000552449.1 UniProtKB/TrEMBL
  ENST00000552577 ENTREZGENE
  ENST00000553040.5 UniProtKB/TrEMBL
GTEx ENSG00000139636 GTEx
HGNC ID HGNC:18268 ENTREZGENE
Human Proteome Map LMBR1L Human Proteome Map
InterPro LIMR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LMBR1-like_membr_prot UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:55716 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 55716 ENTREZGENE
OMIM 610007 OMIM
PANTHER PROTEIN LMBR1L UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12625 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam LMBR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142671545 PharmGKB
PRINTS LIPOCALINIMR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A024R0Y9 ENTREZGENE, UniProtKB/TrEMBL
  A0A0S2Z5F8_HUMAN UniProtKB/TrEMBL
  A0A0S2Z5M5_HUMAN UniProtKB/TrEMBL
  A0A0S2Z5S6 ENTREZGENE, UniProtKB/TrEMBL
  A0A0S2Z6E3 ENTREZGENE, UniProtKB/TrEMBL
  E7ESX7_HUMAN UniProtKB/TrEMBL
  F8VPB1_HUMAN UniProtKB/TrEMBL
  F8VVE2_HUMAN UniProtKB/TrEMBL
  F8VYZ9_HUMAN UniProtKB/TrEMBL
  F8VZU8_HUMAN UniProtKB/TrEMBL
  F8W054_HUMAN UniProtKB/TrEMBL
  F8W0N6_HUMAN UniProtKB/TrEMBL
  F8WE63_HUMAN UniProtKB/TrEMBL
  H0YHY8_HUMAN UniProtKB/TrEMBL
  H0YHZ2_HUMAN UniProtKB/TrEMBL
  H0YI83_HUMAN UniProtKB/TrEMBL
  H0YIX2_HUMAN UniProtKB/TrEMBL
  LMBRL_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q969J4 ENTREZGENE
  Q96BY8 ENTREZGENE
  Q96HN8 ENTREZGENE
  Q9NT09 ENTREZGENE
  Q9NVE1 ENTREZGENE
  Q9NVU9 ENTREZGENE
  Q9ULP6 ENTREZGENE
UniProt Secondary Q969J4 UniProtKB/Swiss-Prot
  Q96BY8 UniProtKB/Swiss-Prot
  Q96HN8 UniProtKB/Swiss-Prot
  Q9NT09 UniProtKB/Swiss-Prot
  Q9NVE1 UniProtKB/Swiss-Prot
  Q9NVU9 UniProtKB/Swiss-Prot
  Q9ULP6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-14 LMBR1L  limb development membrane protein 1 like    limb development membrane protein 1-like  Symbol and/or name change 5135510 APPROVED
2013-08-13 LMBR1L  limb development membrane protein 1-like    limb region 1 homolog (mouse)-like  Symbol and/or name change 5135510 APPROVED