Mospd1 (motile sperm domain containing 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Mospd1 (motile sperm domain containing 1) Mus musculus
Analyze
Symbol: Mospd1
Name: motile sperm domain containing 1
RGD ID: 1557230
MGI Page MGI
Description: Involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Located in nucleus and perinuclear region of cytoplasm. Is expressed in several structures, including brain; cranial ganglion; limb mesenchyme; tongue muscle; and vertebral axis musculature. Orthologous to human MOSPD1 (motile sperm domain containing 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1810018L05Rik; MGC103065; motile sperm domain-containing protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm2147  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X52,433,471 - 52,459,567 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX52,433,475 - 52,459,379 (-)EnsemblGRCm39 Ensembl
GRCm38X53,344,594 - 53,370,658 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX53,344,598 - 53,370,502 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X50,698,198 - 50,723,669 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X49,589,648 - 49,615,119 (-)NCBIMGSCv36mm8
CeleraX40,774,568 - 40,800,077 (-)NCBICelera
Cytogenetic MapXA5NCBI
cM MapX29.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17015433   PMID:21267068  
PMID:21677750   PMID:21792907   PMID:21873635   PMID:23011808   PMID:30973865   PMID:38355793  


Genomics

Comparative Map Data
Mospd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X52,433,471 - 52,459,567 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX52,433,475 - 52,459,379 (-)EnsemblGRCm39 Ensembl
GRCm38X53,344,594 - 53,370,658 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX53,344,598 - 53,370,502 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X50,698,198 - 50,723,669 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X49,589,648 - 49,615,119 (-)NCBIMGSCv36mm8
CeleraX40,774,568 - 40,800,077 (-)NCBICelera
Cytogenetic MapXA5NCBI
cM MapX29.51NCBI
MOSPD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X134,887,632 - 134,915,257 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX134,887,632 - 134,915,257 (-)EnsemblGRCh38hg38GRCh38
GRCh37X134,021,662 - 134,049,287 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X133,849,328 - 133,876,963 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X133,747,181 - 133,774,817NCBI
CeleraX134,408,422 - 134,436,071 (-)NCBICelera
Cytogenetic MapXq26.3NCBI
HuRefX123,419,072 - 123,446,778 (-)NCBIHuRef
CHM1_1X133,933,037 - 133,960,671 (-)NCBICHM1_1
T2T-CHM13v2.0X133,212,706 - 133,240,365 (-)NCBIT2T-CHM13v2.0
Mospd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X138,019,719 - 138,047,475 (-)NCBIGRCr8
mRatBN7.2X133,100,200 - 133,127,960 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX133,100,422 - 133,127,908 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl169,801,058 - 69,801,794 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1482,286,939 - 82,289,374 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX135,260,246 - 135,287,904 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X138,843,103 - 138,870,761 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X136,408,792 - 136,436,446 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X157,745,939 - 157,774,505 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX157,759,624 - 157,773,108 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X152,368,617 - 152,397,192 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X140,301,920 - 140,329,537 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X140,375,356 - 140,402,970 (-)NCBI
Cytogenetic MapXq36NCBI
Mospd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955473103,356 - 129,274 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955473103,541 - 127,854 (+)NCBIChiLan1.0ChiLan1.0
MOSPD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X134,327,149 - 134,357,701 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X134,330,747 - 134,361,317 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X124,038,397 - 124,066,128 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X134,333,858 - 134,361,628 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX134,333,858 - 134,361,628 (-)Ensemblpanpan1.1panPan2
MOSPD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X105,508,711 - 105,532,737 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX105,510,077 - 105,532,636 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX91,619,407 - 91,643,426 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X107,371,271 - 107,395,295 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX107,371,125 - 107,395,235 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X104,782,002 - 104,806,025 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X106,641,834 - 106,665,849 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X106,439,601 - 106,463,625 (-)NCBIUU_Cfam_GSD_1.0
Mospd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X103,658,975 - 103,683,905 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936691273,454 - 298,533 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936691273,490 - 297,290 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MOSPD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX110,693,552 - 110,720,762 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X110,693,538 - 110,786,323 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X126,558,503 - 126,650,869 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MOSPD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X110,067,412 - 110,095,183 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606547,667,450 - 47,694,988 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mospd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479714,583,820 - 14,597,139 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479714,582,334 - 14,606,936 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mospd1
662 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1875
Count of miRNA genes:524
Interacting mature miRNAs:631
Transcripts:ENSMUST00000023836, ENSMUST00000096447, ENSMUST00000152743
Prediction methods:Microtar, Miranda, Pita, Pita,Microtar, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
27226750Femd9_mfemur midshaft diameter 9, 10 week (mouse)X3333746355845360Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
27226780Femd12_mfemur midshaft diameter 12, 16 week (mouse)X3466365356845360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
4142286Pubt1_mpubertal timing 1 (mouse)Not determined5241220061880496Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5077237570434751Mouse
4141126Lvic5_mliver iron content 5 (mouse)Not determined5241220063027567Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001290514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001358456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_027409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_110964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011251017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK007533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC100442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF467665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG068741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG077592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX679674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ046213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV651027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000023836   ⟹   ENSMUSP00000023836
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX52,433,898 - 52,459,379 (-)Ensembl
GRCm38.p6 EnsemblX53,345,021 - 53,370,502 (-)Ensembl
Ensembl Acc Id: ENSMUST00000096447   ⟹   ENSMUSP00000094182
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX52,433,885 - 52,459,379 (-)Ensembl
GRCm38.p6 EnsemblX53,345,008 - 53,370,502 (-)Ensembl
Ensembl Acc Id: ENSMUST00000152743   ⟹   ENSMUSP00000129567
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX52,433,475 - 52,459,379 (-)Ensembl
GRCm38.p6 EnsemblX53,344,598 - 53,370,502 (-)Ensembl
RefSeq Acc Id: NM_001290514   ⟹   NP_001277443
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,436 (-)NCBI
GRCm38X53,344,594 - 53,370,559 (-)NCBI
CeleraX40,774,141 - 40,800,144 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001358456   ⟹   NP_001345385
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,436 (-)NCBI
GRCm38X53,344,594 - 53,370,559 (-)NCBI
Sequence:
RefSeq Acc Id: NM_027409   ⟹   NP_081685
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,436 (-)NCBI
GRCm38X53,344,594 - 53,370,559 (-)NCBI
MGSCv37X50,698,198 - 50,723,669 (-)RGD
CeleraX40,774,141 - 40,800,144 (-)NCBI
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: NR_110964
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,436 (-)NCBI
GRCm38X53,344,594 - 53,370,559 (-)NCBI
CeleraX40,774,141 - 40,800,144 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006541538   ⟹   XP_006541601
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,432 (-)NCBI
GRCm38X53,344,594 - 53,370,560 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006541540   ⟹   XP_006541603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,428 (-)NCBI
GRCm38X53,344,594 - 53,370,555 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006541541   ⟹   XP_006541604
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,567 (-)NCBI
GRCm38X53,344,594 - 53,370,658 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011251017   ⟹   XP_011249319
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,432 (-)NCBI
GRCm38X53,344,594 - 53,370,560 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017318617   ⟹   XP_017174106
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,428 (-)NCBI
GRCm38X53,344,594 - 53,370,555 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030251496   ⟹   XP_030107356
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,430 (-)NCBI
GRCm38X53,344,594 - 53,370,558 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162092   ⟹   XP_036017985
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,430 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004940365
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X52,433,471 - 52,459,567 (-)NCBI
Sequence:
RefSeq Acc Id: NP_081685   ⟸   NM_027409
- Peptide Label: isoform 1
- UniProtKB: Q3UT40 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006541601   ⟸   XM_006541538
- Peptide Label: isoform X1
- UniProtKB: Q3UT40 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006541604   ⟸   XM_006541541
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006541603   ⟸   XM_006541540
- Peptide Label: isoform X2
- UniProtKB: Q497P5 (UniProtKB/Swiss-Prot),   Q9D8Y9 (UniProtKB/Swiss-Prot),   Q8VEL0 (UniProtKB/Swiss-Prot),   Q3UT40 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011249319   ⟸   XM_011251017
- Peptide Label: isoform X1
- UniProtKB: Q3UT40 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001277443   ⟸   NM_001290514
- Peptide Label: isoform 2
- UniProtKB: Q497P5 (UniProtKB/Swiss-Prot),   Q9D8Y9 (UniProtKB/Swiss-Prot),   Q8VEL0 (UniProtKB/Swiss-Prot),   Q3UT40 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017174106   ⟸   XM_017318617
- Peptide Label: isoform X2
- UniProtKB: Q497P5 (UniProtKB/Swiss-Prot),   Q9D8Y9 (UniProtKB/Swiss-Prot),   Q8VEL0 (UniProtKB/Swiss-Prot),   Q3UT40 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001345385   ⟸   NM_001358456
- Peptide Label: isoform 3
- UniProtKB: Q3UT40 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030107356   ⟸   XM_030251496
- Peptide Label: isoform X3
Ensembl Acc Id: ENSMUSP00000129567   ⟸   ENSMUST00000152743
Ensembl Acc Id: ENSMUSP00000023836   ⟸   ENSMUST00000023836
Ensembl Acc Id: ENSMUSP00000094182   ⟸   ENSMUST00000096447
RefSeq Acc Id: XP_036017985   ⟸   XM_036162092
- Peptide Label: isoform X3
Protein Domains
MSP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VEL0-F1-model_v2 AlphaFold Q8VEL0 1-213 view protein structure

Promoters
RGD ID:6845992
Promoter ID:MM_KWN:60312
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000023836,   ENSMUST00000096447,   OTTMUST00000042307
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X50,723,496 - 50,724,012 (-)MPROMDB
RGD ID:13680490
Promoter ID:EPDNEW_M24394
Type:initiation region
Name:Mospd1_1
Description:Mus musculus motile sperm domain containing 1 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X53,370,492 - 53,370,552EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1917630 AgrOrtholog
Ensembl Genes ENSMUSG00000023074 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000023836 ENTREZGENE
  ENSMUST00000023836.4 UniProtKB/Swiss-Prot
  ENSMUST00000096447 ENTREZGENE
  ENSMUST00000096447.9 UniProtKB/Swiss-Prot
  ENSMUST00000152743.8 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MOSPD1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MSP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PapD-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:70380 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1917630 ENTREZGENE
NCBI Gene 70380 ENTREZGENE
PANTHER MOTILE SPERM DOMAIN-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR34441 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Motile_Sperm UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mospd1 PhenoGen
PROSITE MSP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49354 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt MSPD1_MOUSE UniProtKB/Swiss-Prot
  Q3UT40 ENTREZGENE, UniProtKB/TrEMBL
  Q497P5 ENTREZGENE
  Q8VEL0 ENTREZGENE
  Q9D8Y9 ENTREZGENE
UniProt Secondary Q497P5 UniProtKB/Swiss-Prot
  Q9D8Y9 UniProtKB/Swiss-Prot