LOC127405217 (H3K4me1 hESC enhancer GRCh37_chr6:4788958-4789502) - Rat Genome Database

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Gene: LOC127405217 (H3K4me1 hESC enhancer GRCh37_chr6:4788958-4789502) Homo sapiens
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Symbol: LOC127405217
Name: H3K4me1 hESC enhancer GRCh37_chr6:4788958-4789502
RGD ID: 155658226
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in naive human embryonic stem cells. This enhancer is marked by the H3K4me1 histone modification. [provided by RefSeq, Oct 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3864,788,724 - 4,789,268 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3764,788,958 - 4,789,502 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.064,657,671 - 4,658,215 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:30033119  



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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
2289435BMD4_HBone mineral density QTL 4 (human)3.150.0001Bone mineral density6120803913Human
2292824PRSTS5_HProstate tumor susceptibility QTL 5 (human)Prostate tumor susceptibility6119232373Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
1643495BW291_HBody Weight QTL 291 (human)2.13Body weightBMI6119321359Human
RefSeq Transcripts NG_107188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL022725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles



Database
Acc Id
Source(s)
COSMIC LOC127405217 COSMIC
GTEx LOC127405217 GTEx
Human Proteome Map LOC127405217 Human Proteome Map
NCBI Gene LOC127405217 ENTREZGENE