LOC127267889 (H3K4me1 hESC enhancer GRCh37_chr1:19682997-19683497) - Rat Genome Database

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Gene: LOC127267889 (H3K4me1 hESC enhancer GRCh37_chr1:19682997-19683497) Homo sapiens
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Symbol: LOC127267889
Name: H3K4me1 hESC enhancer GRCh37_chr1:19682997-19683497
RGD ID: 155637596
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in primed human embryonic stem cells. This enhancer is marked by the H3K4me1 histone modification. [provided by RefSeq, Oct 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38119,356,503 - 19,357,003 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37119,682,997 - 19,683,497 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.0119,180,040 - 19,180,540 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:30033119  



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Variants in LOC127267889
2 total Variants

The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human
RefSeq Transcripts NG_089750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL035413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles



Database
Acc Id
Source(s)
COSMIC LOC127267889 COSMIC
GTEx LOC127267889 GTEx
Human Proteome Map LOC127267889 Human Proteome Map
NCBI Gene LOC127267889 ENTREZGENE