LOC127267169 (OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:6299873-6300619) - Rat Genome Database

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Gene: LOC127267169 (OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:6299873-6300619) Homo sapiens
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Symbol: LOC127267169
Name: OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:6299873-6300619
RGD ID: 155634891
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in naive and primed human embryonic stem cells. This enhancer associates with the OCT4 transcription factor and is marked by the H3K27ac and H3K4me1 histone modifications. [provided by RefSeq, Oct 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3816,239,813 - 6,240,559 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3716,299,873 - 6,300,619 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.015,765,457 - 5,766,203 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:30033119  



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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
RefSeq Transcripts NG_089044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL031847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles



Database
Acc Id
Source(s)
COSMIC LOC127267169 COSMIC
GTEx LOC127267169 GTEx
Human Proteome Map LOC127267169 Human Proteome Map
NCBI Gene LOC127267169 ENTREZGENE