Or4k15c (olfactory receptor family 4 subfamily K member 15C) - Rat Genome Database

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Gene: Or4k15c (olfactory receptor family 4 subfamily K member 15C) Mus musculus
Analyze
No known orthologs.
Symbol: Or4k15c
Name: olfactory receptor family 4 subfamily K member 15C
RGD ID: 1553323
MGI Page MGI
Description: Predicted to enable olfactory receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane. Orthologous to human OR4K15 (olfactory receptor family 4 subfamily K member 15).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GA_x6K02T2PMLR-5775299-5774334; MOR246; MOR246-4; olfactory receptor 726; olfactory receptor MOR246-4; Olfr726
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391450,321,171 - 50,322,136 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1450,321,027 - 50,328,410 (-)EnsemblGRCm39 Ensembl
GRCm381450,083,714 - 50,084,679 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1450,083,570 - 50,090,953 (-)EnsemblGRCm38mm10GRCm38
MGSCv371450,703,389 - 50,704,354 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361449,005,665 - 49,006,630 (-)NCBIMGSCv36mm8
Celera1446,315,166 - 46,316,131 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1425.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (ISA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:14611657   PMID:21873635   PMID:32295537  


Genomics

Variants

.
Variants in Or4k15c
32 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:52
Count of miRNA genes:52
Interacting mature miRNAs:52
Transcripts:ENSMUST00000072370
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141484Hcbip1_mhexachlorobenzene induced porphyria 1 (mouse)Not determined4733525059962593Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse

Markers in Region
UniSTS:491608  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381450,083,648 - 50,084,703UniSTSGRCm38
MGSCv371450,703,323 - 50,704,378UniSTSGRCm37
Celera1446,315,100 - 46,316,155UniSTS
Cytogenetic Map14C3-D1UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000072370   ⟹   ENSMUSP00000072207
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,321,171 - 50,322,136 (-)Ensembl
GRCm38.p6 Ensembl1450,083,714 - 50,084,679 (-)Ensembl
Ensembl Acc Id: ENSMUST00000206834   ⟹   ENSMUSP00000145832
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,321,027 - 50,328,410 (-)Ensembl
GRCm38.p6 Ensembl1450,083,570 - 50,090,953 (-)Ensembl
Ensembl Acc Id: ENSMUST00000213345   ⟹   ENSMUSP00000148885
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,321,027 - 50,328,410 (-)Ensembl
GRCm38.p6 Ensembl1450,083,570 - 50,090,953 (-)Ensembl
Ensembl Acc Id: ENSMUST00000215105   ⟹   ENSMUSP00000150599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,321,027 - 50,328,388 (-)Ensembl
GRCm38.p6 Ensembl1450,083,570 - 50,090,931 (-)Ensembl
Ensembl Acc Id: ENSMUST00000215278   ⟹   ENSMUSP00000150634
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,321,027 - 50,328,407 (-)Ensembl
GRCm38.p6 Ensembl1450,083,570 - 50,090,950 (-)Ensembl
Ensembl Acc Id: ENSMUST00000217025   ⟹   ENSMUSP00000150116
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,321,027 - 50,328,410 (-)Ensembl
GRCm38.p6 Ensembl1450,083,570 - 50,090,953 (-)Ensembl
Ensembl Acc Id: ENSMUST00000217319   ⟹   ENSMUSP00000150594
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,321,027 - 50,328,388 (-)Ensembl
GRCm38.p6 Ensembl1450,083,570 - 50,090,931 (-)Ensembl
Ensembl Acc Id: ENSMUST00000217422   ⟹   ENSMUSP00000149373
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1450,321,027 - 50,328,395 (-)Ensembl
GRCm38.p6 Ensembl1450,083,570 - 50,090,938 (-)Ensembl
RefSeq Acc Id: NM_146316   ⟹   NP_666428
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391450,321,171 - 50,322,136 (-)NCBI
GRCm381450,083,714 - 50,084,679 (-)ENTREZGENE
MGSCv371450,703,389 - 50,704,354 (-)RGD
Celera1446,315,166 - 46,316,131 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_666428   ⟸   NM_146316
- UniProtKB: A0A0U1RP52 (UniProtKB/TrEMBL),   Q8VEX0 (UniProtKB/TrEMBL),   E9Q8X3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000149373   ⟸   ENSMUST00000217422
Ensembl Acc Id: ENSMUSP00000150594   ⟸   ENSMUST00000217319
Ensembl Acc Id: ENSMUSP00000150116   ⟸   ENSMUST00000217025
Ensembl Acc Id: ENSMUSP00000145832   ⟸   ENSMUST00000206834
Ensembl Acc Id: ENSMUSP00000072207   ⟸   ENSMUST00000072370
Ensembl Acc Id: ENSMUSP00000148885   ⟸   ENSMUST00000213345
Ensembl Acc Id: ENSMUSP00000150634   ⟸   ENSMUST00000215278
Ensembl Acc Id: ENSMUSP00000150599   ⟸   ENSMUST00000215105
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9Q8X3-F1-model_v2 AlphaFold E9Q8X3 1-321 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3030560 AgrOrtholog
Ensembl Genes ENSMUSG00000060523 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000072370 ENTREZGENE
  ENSMUST00000072370.3 UniProtKB/TrEMBL
  ENSMUST00000206834.3 UniProtKB/TrEMBL
  ENSMUST00000213345.2 UniProtKB/TrEMBL
  ENSMUST00000215105.2 UniProtKB/TrEMBL
  ENSMUST00000215278.3 UniProtKB/TrEMBL
  ENSMUST00000217025.2 UniProtKB/TrEMBL
  ENSMUST00000217319.2 UniProtKB/TrEMBL
  ENSMUST00000217422.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfactory_Receptors UniProtKB/TrEMBL
KEGG Report mmu:258313 UniProtKB/TrEMBL
MGD MGI:3030560 ENTREZGENE
NCBI Gene 258313 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or4k15c PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A0U1RP52 ENTREZGENE
  E9Q8X3 ENTREZGENE, UniProtKB/TrEMBL
  Q8VEX0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A0U1RP52 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or4k15c  olfactory receptor family 4 subfamily K member 15C  Olfr726  olfactory receptor 726  Symbol and/or name change 5135510 APPROVED