H2AJ (H2A.J histone) - Rat Genome Database

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Gene: H2AJ (H2A.J histone) Ictidomys tridecemlineatus
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Symbol: H2AJ
Name: H2A.J histone
RGD ID: 155263912
Description: ENCODES a protein that exhibits DNA binding (inferred); protein heterodimerization activity (inferred); structural constituent of chromatin (inferred); FOUND IN chromosome (inferred); nucleosome (inferred); nucleus (inferred)
Type: protein-coding
Latest Assembly: SpeTri2.0 Ensembl - Squirrel SpeTri2.0 Assembly Ensembl
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0 EnsemblNW_0049365872,690,675 - 2,699,733 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IEA)
nucleosome  (IEA)
nucleus  (IEA)

Molecular Function

References

Genomics


Expression


Sequence

Nucleotide Sequences

RefSeq Acc Id: ENSSTOT00000023533   ⟹   ENSSTOP00000015190
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365872,694,524 - 2,699,733 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000042356   ⟹   ENSSTOP00000028747
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365872,690,675 - 2,699,733 (-)Ensembl
Protein Sequences
Ensembl Protein ENSSTOP00000028747.1
RefSeq Acc Id: ENSSTOP00000015190   ⟸   ENSSTOT00000023533
RefSeq Acc Id: ENSSTOP00000028747   ⟸   ENSSTOT00000042356
Protein Domains
Histone H2A C-terminal   Histone H2A/H2B/H3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000026866 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000042356.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.20.10 UniProtKB/TrEMBL
InterPro Histone-fold UniProtKB/TrEMBL
  Histone_H2A UniProtKB/TrEMBL
  Histone_H2A/H2B/H3 UniProtKB/TrEMBL
  Histone_H2A_C UniProtKB/TrEMBL
  Histone_H2A_CS UniProtKB/TrEMBL
PANTHER HISTONE H2A.J UniProtKB/TrEMBL
  PTHR23430 UniProtKB/TrEMBL
Pfam Histone UniProtKB/TrEMBL
  Histone_H2A_C UniProtKB/TrEMBL
PRINTS HISTONEH2A UniProtKB/TrEMBL
PROSITE HISTONE_H2A UniProtKB/TrEMBL
SMART H2A UniProtKB/TrEMBL
Superfamily-SCOP SSF47113 UniProtKB/TrEMBL
UniProt A0A287D5E2_ICTTR UniProtKB/TrEMBL