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Gene: Tob2 (transducer of ERBB2, 2) Mus musculus

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Symbol:

Tob2

Name:

transducer of ERBB2, 2

RGD ID:

1550938

MGI Page

MGI

Description:

Enables nuclear vitamin D receptor binding activity. Acts upstream of or within negative regulation of osteoclast differentiation; positive regulation of ossification; and regulation of gene expression. Predicted to be located in cytosol. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including Meckel's cartilage; cerebral cortex; genitourinary system; lens; and orbito-sphenoid. Orthologous to human TOB2 (transducer of ERBB2, 2).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2900090N22Rik; 4930545K18Rik; AV071822; mKIAA1663; transducer of erbB-2 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TOB2 (transducer of ERBB2, 2)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Tob2 (transducer of ERBB2, 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tob2 (transducer of ERBB2, 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TOB2 (transducer of ERBB2, 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TOB2 (transducer of ERBB2, 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tob2 (transducer of ERBB2, 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TOB2 (transducer of ERBB2, 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TOB2 (transducer of ERBB2, 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tob2 (transducer of ERBB2, 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TOB2 (transducer of ERBB2, 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Tob2 (transducer of ERBB2, 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Tob	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	fog-3	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tob2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	81,732,471 - 81,744,742 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	81,732,473 - 81,742,997 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	81,848,270 - 81,858,326 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	81,848,272 - 81,858,796 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	81,678,700 - 81,688,756 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	81,676,169 - 81,679,400 (-)	NCBI		MGSCv36	mm8
Celera	15	83,967,342 - 83,977,403 (-)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	38.26	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenylosuccinase lyase deficiency (ISO)

common variable immunodeficiency 4 (ISO)

Rubinstein-Taybi syndrome (ISO)

vitiligo (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (ISO)

2,6-dinitrotoluene (ISO)

2-hydroxypropanoic acid (ISO)

2-palmitoylglycerol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (EXP)

6-propyl-2-thiouracil (ISO)

acrylamide (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (EXP)

calciol (EXP)

carbon nanotube (EXP)

chlorpyrifos (EXP,ISO)

ciguatoxin CTX1B (EXP)

clobetasol (EXP)

cocaine (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dicrotophos (ISO)

diethyl phthalate (EXP)

diisobutyl phthalate (EXP)

diisononyl phthalate (EXP)

doxorubicin (ISO)

elemental selenium (ISO)

epoxiconazole (EXP)

fenthion (EXP)

FR900359 (ISO)

furan (ISO)

geldanamycin (ISO)

gentamycin (ISO)

hydrogen cyanide (EXP)

indometacin (ISO)

inulin (EXP)

irinotecan (ISO)

iron dichloride (ISO)

isotretinoin (ISO)

leflunomide (ISO)

levofloxacin (ISO)

methamphetamine (EXP)

methylmercury chloride (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (EXP)

phenformin (ISO)

phenobarbital (EXP)

pirinixic acid (EXP)

potassium cyanide (EXP)

progesterone (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

selenium atom (ISO)

sodium arsenite (EXP,ISO)

tetrachloromethane (EXP)

thimerosal (ISO)

thioacetamide (ISO)

thiram (ISO)

titanium dioxide (EXP)

trichloroethene (ISO)

triphenyl phosphate (ISO)

troglitazone (EXP)

trovafloxacin (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (ISO)

vitamin E (ISO)

vorinostat (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of osteoclast differentiation (IMP)

osteoclast differentiation (IMP)

positive regulation of ossification (IMP)

regulation of gene expression (IBA,IMP)

Cellular Component

cytoplasm (IBA)

cytosol (IEA,ISO)

nucleus (IBA)

Molecular Function

nuclear vitamin D receptor binding (IPI)

protein binding (ISO)

transcription corepressor activity (IBA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal osteoclast differentiation (IAGP)

abnormal osteoclast physiology (IAGP)

abnormal trabecular bone morphology (IAGP)

decreased bone mass (IAGP)

increased bone resorption (IAGP)

increased osteoclast cell number (IAGP)

osteoporosis (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Cloning and characterization of the mouse tob2 gene.	Ajima R, etal., Gene 2000 Aug 8;253(2):215-20.
2.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3.	In search of a function for the TIS21/PC3/BTG1/TOB family.	Matsuda S, etal., FEBS Lett 2001 May 25;497(2-3):67-72.
4.	Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
5.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7671812	PMID:8889548	PMID:10349636	PMID:10788617	PMID:11042159	PMID:11076861	PMID:12477932	PMID:14610273	PMID:15489334	PMID:16141072	PMID:16141073	PMID:16602821
PMID:16890162	PMID:17015433	PMID:18358842	PMID:18799693	PMID:21267068	PMID:21873635	PMID:23071089	PMID:23564456	PMID:25951976	PMID:26568417	PMID:27824289	PMID:27873073
PMID:32611726	PMID:34321999	PMID:38165569	PMID:39478207

Genomics

Comparative Map Data

Tob2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	81,732,471 - 81,744,742 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	81,732,473 - 81,742,997 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	81,848,270 - 81,858,326 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	81,848,272 - 81,858,796 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	81,678,700 - 81,688,756 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	81,676,169 - 81,679,400 (-)	NCBI		MGSCv36	mm8
Celera	15	83,967,342 - 83,977,403 (-)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	38.26	NCBI

TOB2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	41,433,494 - 41,446,801 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	41,433,492 - 41,446,801 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	41,829,498 - 41,842,805 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	40,159,438 - 40,172,973 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	40,153,991 - 40,167,527	NCBI
Celera	22	25,635,881 - 25,649,416 (-)	NCBI		Celera
Cytogenetic Map	22	q13.2	NCBI
HuRef	22	24,795,461 - 24,808,986 (-)	NCBI		HuRef
CHM1_1	22	41,789,383 - 41,802,909 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	41,912,328 - 41,926,961 (-)	NCBI		T2T-CHM13v2.0

Tob2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	115,242,843 - 115,251,563 (-)	NCBI		GRCr8
mRatBN7.2	7	113,362,703 - 113,371,423 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	113,361,148 - 113,372,688 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	115,125,170 - 115,133,852 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	117,348,666 - 117,357,348 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	117,318,106 - 117,326,788 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	123,079,520 - 123,088,240 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	123,079,537 - 123,088,279 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	123,054,915 - 123,063,635 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	120,200,815 - 120,209,535 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	120,235,060 - 120,243,765 (-)	NCBI
Celera	7	109,681,380 - 109,690,101 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Tob2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	26,999,955 - 27,010,156 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	26,999,955 - 27,010,091 (-)	NCBI	ChiLan1.0	ChiLan1.0

TOB2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	51,266,010 - 51,282,651 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	53,965,292 - 53,980,583 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	22,329,783 - 22,344,795 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	40,418,845 - 40,432,735 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

TOB2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	23,817,778 - 23,830,330 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	23,826,437 - 23,827,447 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	23,750,252 - 23,762,864 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	24,562,440 - 24,574,603 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	24,563,274 - 24,574,596 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	24,279,209 - 24,291,370 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	24,600,087 - 24,612,303 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	24,774,549 - 24,786,712 (+)	NCBI		UU_Cfam_GSD_1.0

Tob2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	7,458,068 - 7,467,435 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936492	467,221 - 477,838 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TOB2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	7,086,651 - 7,098,637 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	7,086,397 - 7,098,643 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TOB2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	23,975,676 - 23,985,701 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	23,975,979 - 23,977,013 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	101,432,491 - 101,446,470 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tob2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	7,129,550 - 7,140,668 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	7,129,464 - 7,190,718 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tob2
488 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1522
Count of miRNA genes:	666
Interacting mature miRNAs:	842
Transcripts:	ENSMUST00000039199, ENSMUST00000050467
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884442	Sklq6_m	skull length QTL 6, 5 week (mouse)					15	6129481	100797881	Mouse
38501067	Tip3_m	tuberculosis immunophenotype 3, IFN-g level (mouse)					15	53563396	89584203	Mouse
1300627	Sluc26_m	susceptibility to lung cancer 26 (mouse)			Not determined		15	70345653	104073951	Mouse
1357526	Hyplip2_m	hyperlipidemia 2 (mouse)			Not determined		15	12402203	102896555	Mouse
27226777	Tibl8_m	tibia length 8, 5 week (mouse)					15	6929481	84584201	Mouse
4142198	Hbtq_m	habituation QTL (mouse)			Not determined		15	51160708	85160833	Mouse
15092079	Igly6_m	IgG glycosylation 6, GP6 (mouse)					15	74100540	82674156	Mouse
1357407	Pfat4_m	predicted fat percentage 4 (mouse)	8.6		Body fat amount	predicted fat percentage	15	57117005	91117153	Mouse
14928306	Manh79_m	mandible shape 79 (mouse)					15	78847557	104073951	Mouse
1357894	Epfpq3_m	epididymal fat percentage QTL 3 (mouse)			Not determined		15	78601103	102901704	Mouse
26884425	Cvht2_m	cranial vault height 2, 5 week (mouse)					15	28800146	102008435	Mouse
1302080	Szs13_m	seizure susceptibility 13 (mouse)			Not determined		15	51685832	85694449	Mouse
1300800	Ses3_m	salmonella enteritidis susceptibility 3 (mouse)			Not determined		15	57117005	91117153	Mouse
4142060	W3q6_m	weight 3 weeks QTL 6 (mouse)			Not determined			78601103	102901704	Mouse
13504731	Cath5_m	carotid atherosclerosis 5 (mouse)					15	54789129	88789129	Mouse
15092080	Igly7_m	IgG glycosylation 7, GP10 (mouse)					15	77794919	82674156	Mouse
12791003	Aath8_m	aortic arch atherosclerosis 8 (mouse)					15	73430144	104073951	Mouse
10045637	Heal27_m	wound healing/regeneration 29 (mouse)			Not determined		15	51418361	85418511	Mouse
27095936	Ulnl4_m	ulna length 4, 5 week (mouse)					15	56763396	87684201	Mouse
1558985	Eae32_m	experimental allergic encephalomyelitis susceptibility 32 (mouse)			Not determined		15	32578416	103425899	Mouse
4141921	Pstc3_m	periosteal circumference 3 (mouse)			Not determined		15	67270698	101270847	Mouse
1301708	Cocrb14_m	cocaine related behavior 14 (mouse)			Not determined		15	51806515	85806651	Mouse
12880411	V125Dq11_m	vitamin D active form serum level QTL 11 (mouse)					15	78897881	104073951	Mouse
12880420	V25Dq8_m	vitamin D inactive form serum level QTL 8 (mouse)					15	61584200	95584200	Mouse
1301171	Brm2_m	brachyury modifier 2 (mouse)			Not determined		15	65525376	99525499	Mouse
1300851	Heal4_m	wound healing/regeneration 4 (mouse)			Not determined		15	77527592	104073951	Mouse
14747011	Mancz13_m	mandible centroid size 13 (mouse)					15	72382669	104073951	Mouse
10402490	Dipa5_m	drug induced psychomotor activation 5 (mouse)			Not determined		15	79163411	104073951	Mouse
1300726	Pitm4_m	prion incubation time 4 (mouse)			Not determined		15	70349271	104073951	Mouse
1301429	Pcir3_m	periosteal circumference 3 (mouse)			Not determined		15	48465362	82465496	Mouse
1302197	Bhr2_m	bronchial hyperresponsiveness 2 (mouse)			Not determined		15	64306334	103425899	Mouse
26884402	Cvht9_m	cranial vault height 9, 16 week (mouse)					15	42163396	95497881	Mouse
1302074	Bmd4_m	bone mineral density 4 (mouse)			Not determined		15	56186708	103425899	Mouse
1301119	Drb7_m	dopamine receptor binding 7 (mouse)			Not determined		15	65336578	99341028	Mouse
4141135	Cia35_m	collagen induced arthritis 35 (mouse)			Not determined		15	64811826	98811946	Mouse
27226734	Tibmd5_m	tibia midshaft diameter 5, 10 week (mouse)					15	6129481	86684201	Mouse
4141902	Cia37_m	collagen induced arthritis 37 (mouse)			Not determined		15	80884933	104073951	Mouse
1301601	Faq9_m	fluctuating asymmetry QTL 9 (mouse)			Not determined		15	63163903	97163995	Mouse
1301472	Pain1_m	pain 1 (mouse)			Not determined		15	75320846	90813185	Mouse
26884399	Humsd1_m	humerus midshaft diameter 1, 5 week (mouse)					15	48363396	101708435	Mouse
27226729	Tibmd2_m	tibia midshaft diameter 2, 5 week (mouse)					15	38000244	86684201	Mouse
4141897	Imrfq2_m	immune response to Factor IX QTL 2 (mouse)			Not determined			79908940	104073951	Mouse
26884397	Humsd5_m	humerus midshaft diameter 5, 10 week (mouse)					15	48363396	98397881	Mouse
1301284	Cosz3_m	cocaine seizure 3 (mouse)			Not determined		15	80313634	104073951	Mouse
1300648	Dbsty4_m	diabesity 4 (mouse)			Not determined		15	70349271	104073951	Mouse
10412067	Pain2_m	pain 2 (mouse)			Not determined		15	51645339	85645626	Mouse
1300974	Pgia9_m	proteoglycan induced arthritis 9 (mouse)			Not determined		15	80884933	104073951	Mouse

Markers in Region

AV071822

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	15	81,848,479 - 81,848,606	UniSTS	GRCm38
MGSCv37	15	81,678,909 - 81,679,036	UniSTS	GRCm37
Celera	15	83,967,551 - 83,967,678	UniSTS
Cytogenetic Map	15	E2	UniSTS
Whitehead/MRC_RH	15	719.33	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_020507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036159530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036159531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB041225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC102103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC158970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF177026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK037631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK044623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK049766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK078476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK080817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK122537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK143542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AV220845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC011163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC021869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC094031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK618657	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DV644744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000050467 ⟹ ENSMUSP00000061390

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	15	81,732,473 - 81,742,686 (-)	Ensembl
GRCm38.p6 Ensembl	15	81,848,272 - 81,858,485 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000229500

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	15	81,739,935 - 81,742,524 (-)	Ensembl
GRCm38.p6 Ensembl	15	81,855,734 - 81,858,323 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000230448

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	15	81,741,878 - 81,742,997 (-)	Ensembl
GRCm38.p6 Ensembl	15	81,857,677 - 81,858,796 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000231000 ⟹ ENSMUSP00000155503

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	15	81,735,834 - 81,742,723 (-)	Ensembl
GRCm38.p6 Ensembl	15	81,851,633 - 81,858,522 (-)	Ensembl

RefSeq Acc Id:

NM_020507 ⟹ NP_065253

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	15	81,732,471 - 81,742,527 (-)	NCBI
GRCm38	15	81,848,270 - 81,858,326 (-)	ENTREZGENE
MGSCv37	15	81,678,700 - 81,688,756 (-)	RGD
Celera	15	83,967,342 - 83,977,403 (-)	RGD
cM Map	15		ENTREZGENE

Sequence:

show sequence

AGCAGATTCATGCGCAGGGTTGCTGAGGGTGAAACTTTTCATTGACTTTGCTCACTTCGGGCCC
AGGCGCGGGAAGGTGCAGGTCGTTGAGACTGAGTGTCGTGGGAACCGAGAGGCCAGAAGGACAG
GACCTGCCAGACGAGTACATCCAGGGCTGGCCTCCATCCACCGCGTGACGGGTGCCATCCTCGG
GTCCGCCATCCCCGCGCCGTCGCCGCCGAGCTCGACCTCCAAAAACAGCGGAAAGAATCACATG
AGCTCGGTCCTCGTCCCTCTCTACCCTCAAACGACGTAAAAGGACACCGTGGCCCTCAGCCTCG
CGGTGCCCGGGAAGCTGGGAGAGAGACCTCCGTCCCGCGGCCTGCAGAGCGGACCCTTCGTGGA
GACCCGAGAGCCTCTGGATCCCAGGATCCCTCGCCTGTTCCTGCCGCCGCTCTGCTCTTGGGCT
GTGCACGTGTCCCGTGTGTGCGTGCGAGATCTCGGCCTAGAAGAGGGCCATGCAGCTGGAGATC
AAAGTGGCCCTCAACTTCATCATCTCCTACTTATACAACAAGCTGCCCCGCCGCAGGGCAGACC
TGTTTGGGGAGGAGCTAGAGCGGCTTCTGAGAAAGAAATATGAGGGCCACTGGTACCCGGAGAA
GCCGTTGAAGGGTTCTGGCTTCCGCTGTGTCCACATTGGGGAAGTGGTAGACCCTGTGGTGGAG
CTGGCTGCCAAGCGGAGCGGCCTAGCTGTGGAGGATGTGCGTGCCAACGTGCCCGAAGAGCTGA
GTGTCTGGATTGACCCTTTCGAGGTATCCTACCAGATTGGCGAGAAGGGAGTCGTGAAGGTCCT
GTACCTGGGTGACAGTGAGGCGAGTGGTACCCCAGAGCTGGACAAAGAGATCAAGAGCAGCTTC
AACCCTGACGCCCAGGTGTTTGTGCCCATCGGCAGCCAGGACAGCTCTCTGTCCAGCTCTCCCT
CGCCGTCCTTTGGCCAGTCACCCAGCCCCACCTTCATCCCCCGGTCTGCCCAGCCCATCACCTT
TACTACTGCCTCTTTTGCTGCCACCAAATTTGGTTCCACTAAGATGAAGAAGGGTGGTGGGGCA
TCTGGCGGTGTGAGTGTGGGTGGCAGCGGGGCGGGTGGCCAGCAGCCGCCGCCACAGCAGCCTC
GCATGGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTATCTATGCATTC
ACTGAACCTCATCCCAGCCAATCCGGCCCCCCAGTCCCAGCTCTCCCCCAATGCCAAGGAGTTT
GTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCA
CCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCCA
GGTGTTCGGAGGCGGTGCTAACAGCCTGTTCTTGGAGAAATCGCCCTTTGTGGAAGGCCTCAGC
TACAACCTGAATACCATGCAGTATCCCAACCAGCCCTTCCAGCCTGTCGTGCTGGCCAACTGAC
CGTCTTCCCATCTGCCAGGCCAGGAGCACACACGACCACAGGCAAGTGAAAAGAAAGGCCAAAC
GCAAGAGGGAAAGAAAACTGTACAGAAAGATTCCAGTCTTCTCATTCTCCCAGCTAGGAAAAGG
ATTCGCCCAGGCACAGAGTAGGAGGGGCTCCCAAAGCAACAAGTGTTGGACTCAGCCCCTGACT
ATTCTGCCTGCCTCTGATTTCATTTGGTTGGTTTGGATTTTGTAATTATTTTTTTTACATGTAG
TTTTCTATATGACAACTTTAATTAGTGGTTTCCTGTGCTAAGAGTGGTCCAGATGTGAATTGCT
GCTCCCCACTCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGAG
CTGAAACAGGGAGAGGCTGACACCCCCCCACCCTCCACCCCCGTGTCCACAACCCCCAACCTAG
CTGTCTTCTCAGGGCCTGCCACCCAAATAAGTCTGGCCCTAGCCTCAACTCTCTCTCAGGCTGG
GCCACAGGAAGCTGCTGACTGGCCACTTGACACCCTCCCCCTAAAGCTAATGTCTGTGACTATA
GGGAGGTTAGCACTTTTTCTAATTGGAATTCTTCTCTGTCCTGTGGCCCCATCCCTCACCCGCT
CTTGGCCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCTGAGGTT
AGGGCAGAGTTTAGAGGGTGGGCTAAGTGTATGTTTTCATGTATGCATTCATGCCTGTGAGTGT
GTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGTAGATGGGTCC
TGGGTTCTATCACCTGCTTATTTATGTACGAGGTTGGGGGGTGGACCCAGGGTGGGTTGATTGT
CTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACGAGGCTAAGCCCGAGAAACCCCGGGGGACA
GCACTGCATAAGAAACTGGTTTCCCAGACTGCAGAGGGAGCTGCACTTTTGTTTTGACCAAAAA
CAAAAAACAAAACAAAACAAAAACAAAACAAAAATAACTCTGAAGGGCGGGAGGATACCCAAGC
CTGATGCCTGAGAGGAGTCCCTAGACTTCAGCAACTCCGCTGCGTGGCCTGAGCCCAGCGGGAG
GGATGGGGAGAGAATTTTTTGGAGTCCGTGCCTGTGGTGGGCAGTCCTGAGCCTTCAGCTGAAG
CAGTGCTTTTTGGCTGCCCTCACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTCCTGTGC
ACAGGAGAAGCTCCTGCACCAGAAAGCACCAAAGCCCCTGGCACCCCATCTTACTCCACTCTCC
CCAGGGACTCCCAGGTGGGAACTGCTGTGGCAGTGAGCTCAGCCCGGACAGACACTGCCAACCC
TGTCTCCTGGCATTGGGCTCCGGCTCTACCTCCCCAAGCAGGGCGAGGCCCCGCCTTCTCAGCC
TAGCACCACCTGTCCCCGAGTCTTCTCCAGCTTGCCCATCATTCTCGGCGCCCACACAGGTGAC
AGTCCCAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTTACCCGCCTGCCCAGCCCCT
CCTCCCACAGGAACACAGGTACCACCTGCACCCACGACAGCTTCTTTTCTCACACATGGGGAGA
CTGGAGCCGAGCCCCTTGTGTCTTTTGAAATAGGAAGAAAAATGAGTGTTCAGGAACATGACTC
CTGGACTGGGCTCTTGGGCCCAGTTCAGTGTCTCATCGCAAATCTAGGCATTTTTGCTTCTATT
TTATTTAATTTTTTTTTTTAAGGAAAAAAAAAAAAAACAAAACAAGAAAACTGCACTAATTTAC
CTGGTTTCGTAGAAGAACTTTTTTTTATTTTTTACATTTTTTGGTGTCCGTTTGTATTGAATAA
TTTGCTACATTTGTAAAATGTAAGAGGTATATATATAATATATGTATATTTCTAATGTAAGAAA
CGTAATTTTTTTCTTTTCAAGATTTTTTCTTAAAAAGAGGAGAGAAACCAATATTTTTTCAGGA
AAAACAAACTTTAAAAAATAGGAACATAAAACCACCTCCACCCCTCGCCCCATCCTCTCTATCC
CTCTCACCCAGGAGCAAAACAGAAGGTGGATAAGATTGTCAAGAATGTCAGCTGTCAGTCACGC
TGTCTCTGTCTTGATGCTGTAGTCTCTAGAGCTCCCCCTAGAGATGGGAGCAGGCACTGAAGCA
GCCATAGAGAGGAGCCCGGGAGCGGGGCGACCTTTTTTTCTCTAGCGAAGGAAGAATGCAATCA
AGACGTTTTGTATTCAGAACATTGTGCAATATTTTGGAATGAGACATTGGTGTGTTTAGAGATT
TAGTTTCAAAACAAAGATTGATCAAATCTGTACAGTTTATATTGTTCCAGATTTTTTTAAGTTT
GTATTAAAAGCATGATATATAATAGC

hide sequence

RefSeq Acc Id:

XM_036159530 ⟹ XP_036015423

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	15	81,732,472 - 81,744,742 (-)	NCBI

Sequence:

show sequence

TCCAGCTCATCCTAACCTTTTTCATCATTCTGTCTTGGAATATTTCTCATTGGGAAATGCTCAC
CAACTAGTGTTTATAGGCTGCAATTTGGCTAATTTTTCATGATGAAAAATATAAACTGTTTTGC
AAATTCAGGTATTTTTTCAGAGAGGGAGACTGACCTATTTGAAGCAGGATTCACACACAATATT
GATTAATCACAAGATTTCCATGTTTTTAGAAATGAATAATCGTGTTTGTCAACGTAAGAATATT
TGTTGCATTAAATCGAAAACACACAGTGGGTGGCAGAACCGGGATATAAACCCACCTATTTCTA
TGGCCGCCTCTAATGATAGACTACAAATACCAGCTTCCCTTGCGATACCAAAGGGTACAAACGT
TTGCTTACCAGAAGCTGTATCTAAAACCCAATCAGACGTCTCTCTCTGCTTGACGGCCAATGGG
AGGGCTGTTGCTAACATATCTGTTTTATTTTTAGCTTTCATCCTTGTGGGCGGTCTCATGGCAT
TAGATGGAACACTGGGGGTGGGGGGGTGGGGGCAGGGCTGCTAAAAGGGAAGGGTGAAGTGAAG
AGGGGCATGTATGACGCTTGCTGACGCACAAGTAGTCCCAGGAGAAGCCCCCGGGCTGTCCAGC
TCGGATTGTGGGGGATGGGACACACGCGCTTAGGTTTCCTCCTGCCATCCTGGCACCGCGGAGT
TTGCCCTCCCGCCCGGCATTTCTCTCCTCCTGTCTAGGAAAGCGTATTTAAATCTCTATACCTC
CGTTGATCTCTGCTCTTGCCTACGTGATCAAGGAAAATAAAACGCACACAGTTCGTAACTGGAA
ACTTTCCGATCTCACCGCCCCACGTGGGTTCGGAGACTGCCGTTGCACCGGAACCTTCAGGAAC
GTGAATAAAGAATAGGGGTTGGCCAGGCGTGGTGGTGCACGCCTTTAATCCCAGCACTCGGGAG
ACAGAGGCAGGCTGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTCTGTCCCTACCCTCC
CCGGGGTTGGTCTACACCGGTTTAAAAAAAAAAGAAAAAAACGTACATGGCGAGCTCAGACTGC
TTTGGAGTCTTAAGAGAAGAAATCCGGCGCTAAGGCGCTCAGAAGGATTCCGAGGGTGAGCAGC
CCCGCTGAGGACGTGGCAGGGAGGGGTCTAGAGGAGACAAGGTGAGAAGATCGCTATTACACTT
CCCGCAGAACCTGGAATCCCAACCTACGACTGGGCTGCGAGGGGTTAAAGATGCCAAGGGAGGA
AAAGTAGTCCCGGCCCCGCCCCGGCTGGGCGGAGGGACGCATCACGCAGGGGTGGGGAAAGCAG
ATTCATGCGCAGGGTTGCTGAGGGTGAAACTTTTCATTGACTTTGCTCACTTCGGGCCCAGGCG
CGGGAAGGTGCAGGTCGTTGAGACTGAGTGTCGTGGGAACCGAGAGGCCAGAAGGACAGGACCT
GCCAGACGAGTACATCCAGGGCTGGCCTCCATCCACCGCGTGACGGGTGCCATCCTCGGGTCCG
CCATCCCCGCGCCGTCGCCGCCGAGCTCGACCTCCAAAAACAGCGGAAAGAATCACATGAGCTC
GGTCCTCGTCCCTCTCTACCCTCAAACGACGTAAAAGGACACCGTGGCCCTCAGCCTCGCGGTG
CCCGGGAAGCTGGGAGAGAGACCTCCGTCCCGCGGCCTGCAGAGCGGACCCTTCGTGGAGACCC
GAGAGCCTCTGGATCCCAGGATCCCTCGCCTGTTCCTGCCGCCGCTCTGCTCTTGGGCTGTGCA
CGTGTCCCGTGTGTGCGTGCGAGATCTCGGCCTAGAAGAGGGCCATGCAGCTGGAGATCAAAGT
GGCCCTCAACTTCATCATCTCCTACTTATACAACAAGCTGCCCCGCCGCAGGGCAGACCTGTTT
GGGGAGGAGCTAGAGCGGCTTCTGAGAAAGAAATATGAGGGCCACTGGTACCCGGAGAAGCCGT
TGAAGGGTTCTGGCTTCCGCTGTGTCCACATTGGGGAAGTGGTAGACCCTGTGGTGGAGCTGGC
TGCCAAGCGGAGCGGCCTAGCTGTGGAGGATGTGCGTGCCAACGTGCCCGAAGAGCTGAGTGTC
TGGATTGACCCTTTCGAGGTATCCTACCAGATTGGCGAGAAGGGAGTCGTGAAGGTCCTGTACC
TGGGTGACAGTGAGGCGAGTGGTACCCCAGAGCTGGACAAAGAGATCAAGAGCAGCTTCAACCC
TGACGCCCAGGTGTTTGTGCCCATCGGCAGCCAGGACAGCTCTCTGTCCAGCTCTCCCTCGCCG
TCCTTTGGCCAGTCACCCAGCCCCACCTTCATCCCCCGGTCTGCCCAGCCCATCACCTTTACTA
CTGCCTCTTTTGCTGCCACCAAATTTGGTTCCACTAAGATGAAGAAGGGTGGTGGGGCATCTGG
CGGTGTGAGTGTGGGTGGCAGCGGGGCGGGTGGCCAGCAGCCGCCGCCACAGCAGCCTCGCATG
GCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTATCTATGCATTCACTGA
ACCTCATCCCAGCCAATCCGGCCCCCCAGTCCCAGCTCTCCCCCAATGCCAAGGAGTTTGTGTA
CAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCACCAGCACCACG
GCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGTGTCCCAGGTGT
TCGGAGGCGGTGCTAACAGCCTGTTCTTGGAGAAATCGCCCTTTGTGGAAGGCCTCAGCTACAA
CCTGAATACCATGCAGTATCCCAACCAGCCCTTCCAGCCTGTCGTGCTGGCCAACTGACCGTCT
TCCCATCTGCCAGGCCAGGAGCACACACGACCACAGGCAAGTGAAAAGAAAGGCCAAACGCAAG
AGGGAAAGAAAACTGTACAGAAAGATTCCAGTCTTCTCATTCTCCCAGCTAGGAAAAGGATTCG
CCCAGGCACAGAGTAGGAGGGGCTCCCAAAGCAACAAGTGTTGGACTCAGCCCCTGACTATTCT
GCCTGCCTCTGATTTCATTTGGTTGGTTTGGATTTTGTAATTATTTTTTTTACATGTAGTTTTC
TATATGACAACTTTAATTAGTGGTTTCCTGTGCTAAGAGTGGTCCAGATGTGAATTGCTGCTCC
CCACTCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAGGAAGAGCTGAA
ACAGGGAGAGGCTGACACCCCCCCACCCTCCACCCCCGTGTCCACAACCCCCAACCTAGCTGTC
TTCTCAGGGCCTGCCACCCAAATAAGTCTGGCCCTAGCCTCAACTCTCTCTCAGGCTGGGCCAC
AGGAAGCTGCTGACTGGCCACTTGACACCCTCCCCCTAAAGCTAATGTCTGTGACTATAGGGAG
GTTAGCACTTTTTCTAATTGGAATTCTTCTCTGTCCTGTGGCCCCATCCCTCACCCGCTCTTGG
CCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCTGAGGTTAGGGC
AGAGTTTAGAGGGTGGGCTAAGTGTATGTTTTCATGTATGCATTCATGCCTGTGAGTGTGTGGC
TTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGTAGATGGGTCCTGGGT
TCTATCACCTGCTTATTTATGTACGAGGTTGGGGGGTGGACCCAGGGTGGGTTGATTGTCTCTT
TGTAAGGAAGTATGTGTCGGGGGTGACACGAGGCTAAGCCCGAGAAACCCCGGGGGACAGCACT
GCATAAGAAACTGGTTTCCCAGACTGCAGAGGGAGCTGCACTTTTGTTTTGACCAAAAACAAAA
AACAAAACAAAACAAAAACAAAACAAAAATAACTCTGAAGGGCGGGAGGATACCCAAGCCTGAT
GCCTGAGAGGAGTCCCTAGACTTCAGCAACTCCGCTGCGTGGCCTGAGCCCAGCGGGAGGGATG
GGGAGAGAATTTTTTGGAGTCCGTGCCTGTGGTGGGCAGTCCTGAGCCTTCAGCTGAAGCAGTG
CTTTTTGGCTGCCCTCACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTCCTGTGCACAGG
AGAAGCTCCTGCACCAGAAAGCACCAAAGCCCCTGGCACCCCATCTTACTCCACTCTCCCCAGG
GACTCCCAGGTGGGAACTGCTGTGGCAGTGAGCTCAGCCCGGACAGACACTGCCAACCCTGTCT
CCTGGCATTGGGCTCCGGCTCTACCTCCCCAAGCAGGGCGAGGCCCCGCCTTCTCAGCCTAGCA
CCACCTGTCCCCGAGTCTTCTCCAGCTTGCCCATCATTCTCGGCGCCCACACAGGTGACAGTCC
CAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTTACCCGCCTGCCCAGCCCCTCCTCC
CACAGGAACACAGGTACCACCTGCACCCACGACAGCTTCTTTTCTCACACATGGGGAGACTGGA
GCCGAGCCCCTTGTGTCTTTTGAAATAGGAAGAAAAATGAGTGTTCAGGAACATGACTCCTGGA
CTGGGCTCTTGGGCCCAGTTCAGTGTCTCATCGCAAATCTAGGCATTTTTGCTTCTATTTTATT
TAATTTTTTTTTTTAAGGAAAAAAAAAAAAAACAAAACAAGAAAACTGCACTAATTTACCTGGT
TTCGTAGAAGAACTTTTTTTTATTTTTTACATTTTTTGGTGTCCGTTTGTATTGAATAATTTGC
TACATTTGTAAAATGTAAGAGGTATATATATAATATATGTATATTTCTAATGTAAGAAACGTAA
TTTTTTTCTTTTCAAGATTTTTTCTTAAAAAGAGGAGAGAAACCAATATTTTTTCAGGAAAAAC
AAACTTTAAAAAATAGGAACATAAAACCACCTCCACCCCTCGCCCCATCCTCTCTATCCCTCTC
ACCCAGGAGCAAAACAGAAGGTGGATAAGATTGTCAAGAATGTCAGCTGTCAGTCACGCTGTCT
CTGTCTTGATGCTGTAGTCTCTAGAGCTCCCCCTAGAGATGGGAGCAGGCACTGAAGCAGCCAT
AGAGAGGAGCCCGGGAGCGGGGCGACCTTTTTTTCTCTAGCGAAGGAAGAATGCAATCAAGACG
TTTTGTATTCAGAACATTGTGCAATATTTTGGAATGAGACATTGGTGTGTTTAGAGATTTAGTT
TCAAAACAAAGATTGATCAAATCTGTACAGTTTATATTGTTCCAGATTTTTTTAAGTTTGTATT
AAAAGCATGATATATAATAG

hide sequence

RefSeq Acc Id:

XM_036159531 ⟹ XP_036015424

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	15	81,732,472 - 81,743,422 (-)	NCBI

Sequence:

show sequence

CTGTCGGGCTTAATGAACACCCTGCTCACCTTGCCAGGGCTGGCGCTTCTTCTGCGACTATTGC
TAGAAGGAGCGCGGCTCTCATGCTCTCCTGTGCGTGGGTAACCTGCTCCAGAGAGCTCGAGGAC
CTCAGCAGAGGGGCGGCGGTCGCGCGTGGCCAGCCCTATTATGGTGTTTGGGACCCAACTTTCC
GGGCTGGGAGTGCATGACTAACCGGTGCTCCGCTCTTTTTTCTAACCCTCGATCTTCTTGCACC
CTTCCCTTCCCTTCGATCTTCCACGTCCCCACCAGGAGGGCGACACTGGTAAACTCAGGTCTGT
CCCTACCCTCCCCGGGGTTGGTCTACACCGGTTTAAAAAAAAAAGAAAAAAACGTACATGGCGA
GCTCAGACTGCTTTGGAGTCTTAAGAGAAGAAATCCGGCGCTAAGGCGCTCAGAAGGATTCCGA
GGGTGAGCAGCCCCGCTGAGGACGTGGCAGGGAGGGGTCTAGAGGAGACAAGGTGAGAAGATCG
CTATTACACTTCCCGCAGAACCTGGAATCCCAACCTACGACTGGGCTGCGAGGGGTTAAAGATG
CCAAGGGAGGAAAAGTAGTCCCGGCCCCGCCCCGGCTGGGCGGAGGGACGCATCACGCAGGGGT
GGGGAAAGCAGATTCATGCGCAGGGTTGCTGAGGGTGAAACTTTTCATTGACTTTGCTCACTTC
GGGCCCAGGCGCGGGAAGGTGCAGGTCGTTGAGACTGAGTGTCGTGGGAACCGAGAGGCCAGAA
GGACAGGACCTGCCAGACGAGTACATCCAGGGCTGGCCTCCATCCACCGCGTGACGGGTGCCAT
CCTCGGGTCCGCCATCCCCGCGCCGTCGCCGCCGAGCTCGACCTCCAAAAACAGCGGAAAGAAT
CACATGAGCTCGGTCCTCGTCCCTCTCTACCCTCAAACGACGTAAAAGGACACCGTGGCCCTCA
GCCTCGCGGTGCCCGGGAAGCTGGGAGAGAGACCTCCGTCCCGCGGCCTGCAGAGCGGACCCTT
CGTGGAGACCCGAGAGCCTCTGGATCCCAGGATCCCTCGCCTGTTCCTGCCGCCGCTCTGCTCT
TGGGCTGTGCACGTGTCCCGTGTGTGCGTGCGAGATCTCGGCCTAGAAGAGGGCCATGCAGCTG
GAGATCAAAGTGGCCCTCAACTTCATCATCTCCTACTTATACAACAAGCTGCCCCGCCGCAGGG
CAGACCTGTTTGGGGAGGAGCTAGAGCGGCTTCTGAGAAAGAAATATGAGGGCCACTGGTACCC
GGAGAAGCCGTTGAAGGGTTCTGGCTTCCGCTGTGTCCACATTGGGGAAGTGGTAGACCCTGTG
GTGGAGCTGGCTGCCAAGCGGAGCGGCCTAGCTGTGGAGGATGTGCGTGCCAACGTGCCCGAAG
AGCTGAGTGTCTGGATTGACCCTTTCGAGGTATCCTACCAGATTGGCGAGAAGGGAGTCGTGAA
GGTCCTGTACCTGGGTGACAGTGAGGCGAGTGGTACCCCAGAGCTGGACAAAGAGATCAAGAGC
AGCTTCAACCCTGACGCCCAGGTGTTTGTGCCCATCGGCAGCCAGGACAGCTCTCTGTCCAGCT
CTCCCTCGCCGTCCTTTGGCCAGTCACCCAGCCCCACCTTCATCCCCCGGTCTGCCCAGCCCAT
CACCTTTACTACTGCCTCTTTTGCTGCCACCAAATTTGGTTCCACTAAGATGAAGAAGGGTGGT
GGGGCATCTGGCGGTGTGAGTGTGGGTGGCAGCGGGGCGGGTGGCCAGCAGCCGCCGCCACAGC
AGCCTCGCATGGCCCGCTCACCCACAAAGAACCTGCTGAAGCACAAGAGCCTCTCTCTATCTAT
GCATTCACTGAACCTCATCCCAGCCAATCCGGCCCCCCAGTCCCAGCTCTCCCCCAATGCCAAG
GAGTTTGTGTACAACGGTGGTGGCTCACCCAGCCTCTTCTTCGATGGGGTGGAAGGCCCGAGCA
CCAGCACCACGGCCCCCTTCGGCAGCGGTGGAGCCAGCACTTGCAACAGCAGCAGCTTTGATGT
GTCCCAGGTGTTCGGAGGCGGTGCTAACAGCCTGTTCTTGGAGAAATCGCCCTTTGTGGAAGGC
CTCAGCTACAACCTGAATACCATGCAGTATCCCAACCAGCCCTTCCAGCCTGTCGTGCTGGCCA
ACTGACCGTCTTCCCATCTGCCAGGCCAGGAGCACACACGACCACAGGCAAGTGAAAAGAAAGG
CCAAACGCAAGAGGGAAAGAAAACTGTACAGAAAGATTCCAGTCTTCTCATTCTCCCAGCTAGG
AAAAGGATTCGCCCAGGCACAGAGTAGGAGGGGCTCCCAAAGCAACAAGTGTTGGACTCAGCCC
CTGACTATTCTGCCTGCCTCTGATTTCATTTGGTTGGTTTGGATTTTGTAATTATTTTTTTTAC
ATGTAGTTTTCTATATGACAACTTTAATTAGTGGTTTCCTGTGCTAAGAGTGGTCCAGATGTGA
ATTGCTGCTCCCCACTCCCTCCCTCCGCCCCTTTGGGATCAGTGTGTTGAGGCTCACCGGGAAG
GAAGAGCTGAAACAGGGAGAGGCTGACACCCCCCCACCCTCCACCCCCGTGTCCACAACCCCCA
ACCTAGCTGTCTTCTCAGGGCCTGCCACCCAAATAAGTCTGGCCCTAGCCTCAACTCTCTCTCA
GGCTGGGCCACAGGAAGCTGCTGACTGGCCACTTGACACCCTCCCCCTAAAGCTAATGTCTGTG
ACTATAGGGAGGTTAGCACTTTTTCTAATTGGAATTCTTCTCTGTCCTGTGGCCCCATCCCTCA
CCCGCTCTTGGCCTGGACCAGATACATGCAGCCTCTTTCTCCAGCACAGCCTTTCCCTGAGCCT
GAGGTTAGGGCAGAGTTTAGAGGGTGGGCTAAGTGTATGTTTTCATGTATGCATTCATGCCTGT
GAGTGTGTGGCTTGCTGTCGTGTCCTCTGGGATCCCAAGCCACGCGGGTCTTCCCTCTGTAGAT
GGGTCCTGGGTTCTATCACCTGCTTATTTATGTACGAGGTTGGGGGGTGGACCCAGGGTGGGTT
GATTGTCTCTTTGTAAGGAAGTATGTGTCGGGGGTGACACGAGGCTAAGCCCGAGAAACCCCGG
GGGACAGCACTGCATAAGAAACTGGTTTCCCAGACTGCAGAGGGAGCTGCACTTTTGTTTTGAC
CAAAAACAAAAAACAAAACAAAACAAAAACAAAACAAAAATAACTCTGAAGGGCGGGAGGATAC
CCAAGCCTGATGCCTGAGAGGAGTCCCTAGACTTCAGCAACTCCGCTGCGTGGCCTGAGCCCAG
CGGGAGGGATGGGGAGAGAATTTTTTGGAGTCCGTGCCTGTGGTGGGCAGTCCTGAGCCTTCAG
CTGAAGCAGTGCTTTTTGGCTGCCCTCACCTCGCACTACTTGACCTTGAGGCTCTGAGTATCTC
CTGTGCACAGGAGAAGCTCCTGCACCAGAAAGCACCAAAGCCCCTGGCACCCCATCTTACTCCA
CTCTCCCCAGGGACTCCCAGGTGGGAACTGCTGTGGCAGTGAGCTCAGCCCGGACAGACACTGC
CAACCCTGTCTCCTGGCATTGGGCTCCGGCTCTACCTCCCCAAGCAGGGCGAGGCCCCGCCTTC
TCAGCCTAGCACCACCTGTCCCCGAGTCTTCTCCAGCTTGCCCATCATTCTCGGCGCCCACACA
GGTGACAGTCCCAAGTAGATAACCTCCATGGGACAAGTTGGGTGTTGCCTTACCCGCCTGCCCA
GCCCCTCCTCCCACAGGAACACAGGTACCACCTGCACCCACGACAGCTTCTTTTCTCACACATG
GGGAGACTGGAGCCGAGCCCCTTGTGTCTTTTGAAATAGGAAGAAAAATGAGTGTTCAGGAACA
TGACTCCTGGACTGGGCTCTTGGGCCCAGTTCAGTGTCTCATCGCAAATCTAGGCATTTTTGCT
TCTATTTTATTTAATTTTTTTTTTTAAGGAAAAAAAAAAAAAACAAAACAAGAAAACTGCACTA
ATTTACCTGGTTTCGTAGAAGAACTTTTTTTTATTTTTTACATTTTTTGGTGTCCGTTTGTATT
GAATAATTTGCTACATTTGTAAAATGTAAGAGGTATATATATAATATATGTATATTTCTAATGT
AAGAAACGTAATTTTTTTCTTTTCAAGATTTTTTCTTAAAAAGAGGAGAGAAACCAATATTTTT
TCAGGAAAAACAAACTTTAAAAAATAGGAACATAAAACCACCTCCACCCCTCGCCCCATCCTCT
CTATCCCTCTCACCCAGGAGCAAAACAGAAGGTGGATAAGATTGTCAAGAATGTCAGCTGTCAG
TCACGCTGTCTCTGTCTTGATGCTGTAGTCTCTAGAGCTCCCCCTAGAGATGGGAGCAGGCACT
GAAGCAGCCATAGAGAGGAGCCCGGGAGCGGGGCGACCTTTTTTTCTCTAGCGAAGGAAGAATG
CAATCAAGACGTTTTGTATTCAGAACATTGTGCAATATTTTGGAATGAGACATTGGTGTGTTTA
GAGATTTAGTTTCAAAACAAAGATTGATCAAATCTGTACAGTTTATATTGTTCCAGATTTTTTT
AAGTTTGTATTAAAAGCATGATATATAATAG

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Protein Sequences


Protein RefSeqs	NP_065253	(Get FASTA)	NCBI Sequence Viewer
	XP_036015423	(Get FASTA)	NCBI Sequence Viewer
	XP_036015424	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH11163	(Get FASTA)	NCBI Sequence Viewer
	AAH94031	(Get FASTA)	NCBI Sequence Viewer
	BAA94606	(Get FASTA)	NCBI Sequence Viewer
	BAB29009	(Get FASTA)	NCBI Sequence Viewer
	BAC37295	(Get FASTA)	NCBI Sequence Viewer
	BAC38032	(Get FASTA)	NCBI Sequence Viewer
	BAC65819	(Get FASTA)	NCBI Sequence Viewer
	BAE25428	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000061390
	ENSMUSP00000061390.8
	ENSMUSP00000155503.2
GenBank Protein	Q9JM55	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_065253 ⟸ NM_020507

- UniProtKB:

Q9JM55 (UniProtKB/Swiss-Prot), Q543X9 (UniProtKB/TrEMBL), Q80TA8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQLEIKVALNFIISYLYNKLPRRRADLFGEELERLLRKKYEGHWYPEKPLKGSGFRCVHIGEVV
DPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGVVKVLYLGDSEASGTPELDKE
IKSSFNPDAQVFVPIGSQDSSLSSSPSPSFGQSPSPTFIPRSAQPITFTTASFAATKFGSTKMK
KGGGASGGVSVGGSGAGGQQPPPQQPRMARSPTKNLLKHKSLSLSMHSLNLIPANPAPQSQLSP
NAKEFVYNGGGSPSLFFDGVEGPSTSTTAPFGSGGASTCNSSSFDVSQVFGGGANSLFLEKSPF
VEGLSYNLNTMQYPNQPFQPVVLAN

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Ensembl Acc Id:

ENSMUSP00000155503 ⟸ ENSMUST00000231000

Ensembl Acc Id:

ENSMUSP00000061390 ⟸ ENSMUST00000050467

RefSeq Acc Id:	XP_036015423 ⟸ XM_036159530
- Peptide Label:	isoform X1
- UniProtKB:	Q9JM55 (UniProtKB/Swiss-Prot), Q543X9 (UniProtKB/TrEMBL), Q80TA8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_036015424 ⟸ XM_036159531
- Peptide Label:	isoform X1
- UniProtKB:	Q9JM55 (UniProtKB/Swiss-Prot), Q543X9 (UniProtKB/TrEMBL), Q80TA8 (UniProtKB/TrEMBL)

Protein Domains

Anti-proliferative protein

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9JM55-F1-model_v2	AlphaFold	Q9JM55	1-345	view protein structure

Promoters

RGD ID:

6847275

Promoter ID:

MM_ACW:18808

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day4, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Liver, Lung

Transcripts:

TOB2.ASEP07-UNSPLICED

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	15	81,679,481 - 81,681,722 (-)	MPROMDB

RGD ID:

6825740

Promoter ID:

MM_KWN:19171

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000039199, NM_020507, UC007WXN.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	15	81,686,486 - 81,690,207 (-)	MPROMDB

RGD ID:

8684530

Promoter ID:

EPDNEW_M20260

Type:

initiation region

Name:

Tob2_1

Description:

Mus musculus transducer of ERBB2, 2 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	15	81,858,273 - 81,858,333	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1888525	AgrOrtholog
Ensembl Genes	ENSMUSG00000048546	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000050467	ENTREZGENE
	ENSMUST00000050467.9	UniProtKB/Swiss-Prot
	ENSMUST00000231000.2	UniProtKB/TrEMBL
Gene3D-CATH	3.90.640.90	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Anti_prolifrtn	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ataxin-2_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	BTG-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tob1/2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:57259	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:1888525	ENTREZGENE
NCBI Gene	57259	ENTREZGENE
PANTHER	PTHR17537	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR17537:SF3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	BTG	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PAM2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	TOB2	RGD
PhenoGen	Tob2	PhenoGen
PRINTS	ANTIPRLFBTG1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	BTG_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	BTG_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	btg1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF160696	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A2R8W6W6_MOUSE	UniProtKB/TrEMBL
	Q543X9	ENTREZGENE, UniProtKB/TrEMBL
	Q80TA8	ENTREZGENE, UniProtKB/TrEMBL
	Q8BP12_MOUSE	UniProtKB/TrEMBL
	Q9D6D6_MOUSE	UniProtKB/TrEMBL
	Q9JM55	ENTREZGENE, UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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