Or7e173 (olfactory receptor family 7 subfamily E member 173) - Rat Genome Database

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Gene: Or7e173 (olfactory receptor family 7 subfamily E member 173) Mus musculus
Analyze
Symbol: Or7e173
Name: olfactory receptor family 7 subfamily E member 173
RGD ID: 1550074
MGI Page MGI
Description: Predicted to enable olfactory receptor activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human OR7E24 (olfactory receptor family 7 subfamily E member 24).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GA_x6K02T2PVTD-13768406-13767468; MOR145; MOR145-5; olfactory receptor 866; olfactory receptor MOR145-5; Olfr866
RGD Orthologs
Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39919,938,255 - 19,939,331 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl919,938,255 - 19,939,331 (-)EnsemblGRCm39 Ensembl
GRCm38920,026,959 - 20,028,035 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl920,026,959 - 20,028,035 (-)EnsemblGRCm38mm10GRCm38
MGSCv37919,831,403 - 19,832,479 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36919,777,400 - 19,778,338 (-)NCBIMGSCv36mm8
Celera917,308,311 - 17,309,387 (-)NCBICelera
Cytogenetic Map9A3NCBI
cM Map97.44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:12477932   PMID:14611657   PMID:21267068   PMID:21873635   PMID:32295537  


Genomics

Comparative Map Data
Or7e173
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39919,938,255 - 19,939,331 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl919,938,255 - 19,939,331 (-)EnsemblGRCm39 Ensembl
GRCm38920,026,959 - 20,028,035 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl920,026,959 - 20,028,035 (-)EnsemblGRCm38mm10GRCm38
MGSCv37919,831,403 - 19,832,479 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36919,777,400 - 19,778,338 (-)NCBIMGSCv36mm8
Celera917,308,311 - 17,309,387 (-)NCBICelera
Cytogenetic Map9A3NCBI
cM Map97.44NCBI
Or7e173
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8826,398,290 - 26,399,228 (-)NCBIGRCr8
mRatBN7.2818,122,043 - 18,122,981 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl817,984,346 - 17,991,376 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx822,145,652 - 22,146,590 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0820,443,496 - 20,444,434 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0818,351,800 - 18,352,738 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0820,397,606 - 20,398,544 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl820,397,606 - 20,398,544 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0820,471,168 - 20,472,106 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4818,584,177 - 18,585,115 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1818,584,176 - 18,585,115 (-)NCBI
Celera819,534,621 - 19,535,559 (-)NCBICelera
Cytogenetic Map8q13NCBI

Variants

.
Variants in Or7e173
17 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:62
Count of miRNA genes:62
Interacting mature miRNAs:62
Transcripts:ENSMUST00000062248
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142326Tgq19_mtriglyceride QTL 19 (mouse)Not determined121060750Mouse
1300899Chol6_mcholesterol 6 (mouse)Not determined9129902913Mouse
13434920Dcollq1_mdifferential colonization level QTL 1 (mouse)9130341840Mouse
35673312Ari7_mantibody response to influenza 7, day 45, IgG3 (mouse)9780000122211296Mouse
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756237306370Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9991076843910768Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse

Markers in Region
UniSTS:492679  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38920,026,959 - 20,028,035UniSTSGRCm38
MGSCv37919,831,403 - 19,832,479UniSTSGRCm37
Celera917,308,311 - 17,309,387UniSTS
Cytogenetic Map9A2-A5UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000062248   ⟹   ENSMUSP00000054864
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl919,938,255 - 19,939,331 (-)Ensembl
GRCm38.p6 Ensembl920,026,959 - 20,028,035 (-)Ensembl
RefSeq Acc Id: NM_146558   ⟹   NP_666769
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39919,938,255 - 19,939,331 (-)NCBI
GRCm38920,026,959 - 20,028,035 (-)ENTREZGENE
MGSCv37919,831,403 - 19,832,479 (-)RGD
Celera917,308,311 - 17,309,387 (-)RGD
cM Map9 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_666769 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI19370 (Get FASTA)   NCBI Sequence Viewer  
  AAI37763 (Get FASTA)   NCBI Sequence Viewer  
  AAL61202 (Get FASTA)   NCBI Sequence Viewer  
  AAP71341 (Get FASTA)   NCBI Sequence Viewer  
  EDL25083 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000054864
  ENSMUSP00000054864.3
Reference Protein Sequences
RefSeq Acc Id: NP_666769   ⟸   NM_146558
- UniProtKB: Q8VFI7 (UniProtKB/TrEMBL),   Q7TRF4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000054864   ⟸   ENSMUST00000062248
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VFI7-F1-model_v2 AlphaFold Q8VFI7 1-312 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3030700 AgrOrtholog
Ensembl Genes ENSMUSG00000050803 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000062248 ENTREZGENE
  ENSMUST00000062248.3 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report mmu:258551 UniProtKB/TrEMBL
MGD MGI:3030700 ENTREZGENE
NCBI Gene 258551 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 866 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or7e173 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt Q7TRF4 ENTREZGENE, UniProtKB/TrEMBL
  Q8VFI7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or7e173  olfactory receptor family 7 subfamily E member 173  Olfr866  olfactory receptor 866  Symbol and/or name change 5135510 APPROVED