LOC126805591 (BRD4-independent group 4 enhancer GRCh37_chr1:5045612-5046811) - Rat Genome Database

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Gene: LOC126805591 (BRD4-independent group 4 enhancer GRCh37_chr1:5045612-5046811) Homo sapiens
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Symbol: LOC126805591
Name: BRD4-independent group 4 enhancer GRCh37_chr1:5045612-5046811
RGD ID: 153351587
Description: This genomic region was validated as an active enhancer by the STARR-seq (self-transcribing active regulatory region sequencing) massively parallel reporter assay in HCT116 colorectal carcinoma cells. This sequence was defined as a group 4 enhancer that depends on the BRD2, P300/CBP, MED14 and CDK7 cofactors, but it has limited or no dependence on the BRD4 bromodomain protein. [provided by RefSeq, Sep 2022]
Type: biological-region
RefSeq Status: REVIEWED
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3814,985,552 - 4,986,751 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3715,045,612 - 5,046,811 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.014,501,310 - 4,502,509 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:35650434  



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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
RefSeq Transcripts NG_081915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BX005132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles



Database
Acc Id
Source(s)
COSMIC LOC126805591 COSMIC
GTEx LOC126805591 GTEx
Human Proteome Map LOC126805591 Human Proteome Map
NCBI Gene LOC126805591 ENTREZGENE