LOC124903815 (uncharacterized LOC124903815) - Rat Genome Database

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Gene: LOC124903815 (uncharacterized LOC124903815) Homo sapiens
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Symbol: LOC124903815
Name: uncharacterized LOC124903815
RGD ID: 151669128
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381273,223 - 284,291 (+)NCBIGRCh38GRCh38hg38GRCh38
Cytogenetic Map1p36.33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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1 to 10 of 16 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 1p36.21-36.12(chr1:15385267-20980349)x1 copy number loss See cases [RCV000051146] Chr1:15385267..20980349 [GRCh38]
Chr1:15711763..21306842 [GRCh37]
Chr1:15584350..21179429 [NCBI36]
Chr1:1p36.21-36.12		 pathogenic
NM_020765.3(UBR4):c.70G>C (p.Asp24His) single nucleotide variant not specified [RCV004603398] Chr1:19210179 [GRCh38]
Chr1:19536673 [GRCh37]
Chr1:1p36.13		 uncertain significance
NM_020765.3(UBR4):c.47C>T (p.Pro16Leu) single nucleotide variant not specified [RCV004206551] Chr1:19210202 [GRCh38]
Chr1:19536696 [GRCh37]
Chr1:1p36.13		 uncertain significance
NM_020765.3(UBR4):c.76A>G (p.Thr26Ala) single nucleotide variant not specified [RCV004212128] Chr1:19210173 [GRCh38]
Chr1:19536667 [GRCh37]
Chr1:1p36.13		 uncertain significance
GRCh38/hg38 1p36.21-36.13(chr1:15681812-19662339)x1 copy number loss See cases [RCV000138070] Chr1:15681812..19662339 [GRCh38]
Chr1:16008307..19988832 [GRCh37]
Chr1:15880894..19861419 [NCBI36]
Chr1:1p36.21-36.13		 pathogenic
GRCh38/hg38 1p36.13(chr1:19169253-19797307)x3 copy number gain See cases [RCV000141322] Chr1:19169253..19797307 [GRCh38]
Chr1:19495747..20123800 [GRCh37]
Chr1:19368334..19996387 [NCBI36]
Chr1:1p36.13		 likely benign
NM_020765.3(UBR4):c.56C>G (p.Pro19Arg) single nucleotide variant not specified [RCV004282583] Chr1:19210193 [GRCh38]
Chr1:19536687 [GRCh37]
Chr1:1p36.13		 uncertain significance
GRCh38/hg38 1p36.13(chr1:19093306-20063342)x1 copy number loss See cases [RCV000053793] Chr1:19093306..20063342 [GRCh38]
Chr1:19419800..20389835 [GRCh37]
Chr1:19292387..20262422 [NCBI36]
Chr1:1p36.13		 pathogenic
GRCh38/hg38 1p36.13-36.12(chr1:18347821-22512894)x1 copy number loss See cases [RCV000053789] Chr1:18347821..22512894 [GRCh38]
Chr1:18674315..22839387 [GRCh37]
Chr1:18546902..22711974 [NCBI36]
Chr1:1p36.13-36.12		 pathogenic
GRCh38/hg38 1p36.33-35.1(chr1:99125-34026935)x3 copy number gain Trisomy 12p [RCV003447845] Chr1:99125..34026935 [GRCh38]
Chr1:1p36.33-35.1		 pathogenic
1 to 10 of 16 rows

The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
RefSeq Transcripts XR_007065335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007065336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AP006222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_007065335
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381273,223 - 284,291 (+)NCBI
RefSeq Acc Id: XR_007065336
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381273,223 - 284,291 (+)NCBI


Database
Acc Id
Source(s)
COSMIC LOC124903815 COSMIC
GTEx LOC124903815 GTEx
Human Proteome Map LOC124903815 Human Proteome Map
NCBI Gene LOC124903815 ENTREZGENE