MTND4P33 (MT-ND4 pseudogene 33) - Rat Genome Database

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Gene: MTND4P33 (MT-ND4 pseudogene 33) Homo sapiens
Analyze
Symbol: MTND4P33
Name: MT-ND4 pseudogene 33
RGD ID: 15036998
HGNC Page HGNC:51947
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381484,172,841 - 84,173,606 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1484,172,841 - 84,173,606 (+)EnsemblGRCh38hg38GRCh38
GRCh371484,639,185 - 84,639,950 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map14q31.2NCBI
T2T-CHM13v2.01478,386,086 - 78,386,851 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:117
Count of miRNA genes:113
Interacting mature miRNAs:115
Transcripts:ENST00000556706
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system adipose tissue appendage
High
Medium
Low 1 1 1 2
Below cutoff 6 6 3 1 5 1 27 7 16 3 21 2 12 18

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000556706
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1484,172,841 - 84,173,606 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MTND4P33 COSMIC
Ensembl Genes ENSG00000258762 Ensembl, ENTREZGENE
GTEx ENSG00000258762 GTEx
HGNC ID HGNC:51947 ENTREZGENE
Human Proteome Map MTND4P33 Human Proteome Map
NCBI Gene MTND4P33 ENTREZGENE