ENSRNOG00000070004 (null) - Rat Genome Database

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Gene: ENSRNOG00000070004 (null) Rattus norvegicus
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Symbol: ENSRNOG00000070004
Name:
RGD ID: 150342978
Description: Predicted to enable 5S rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal large subunit assembly. Predicted to be part of cytosolic large ribosomal subunit.
Type: protein_coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 EnsemblX47,263,245 - 47,264,783 (+)EnsemblmRatBN7.2 Ensembl
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ENSRNOG00000070004Ratribosomal large subunit assembly involved_inIBAPANTHER:PTN000601661 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
ENSRNOG00000070004Rattranslation involved_inIEAInterPro:IPR0054851600115GO_REF:0000002InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ENSRNOG00000070004Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
ENSRNOG00000070004Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
ENSRNOG00000070004Ratcytosolic large ribosomal subunit part_ofIBAMGI:102854 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
ENSRNOG00000070004Ratcytosolic ribosome located_inIEAARBA:ARBA000265771600115GO_REF:0000117UniProtGO_REF:0000117
ENSRNOG00000070004Ratribonucleoprotein complex part_ofIEAUniProtKB-KW:KW-06871600115GO_REF:0000043UniProtGO_REF:0000043
ENSRNOG00000070004Ratribosome located_inIEAInterPro:IPR0054851600115GO_REF:0000002InterProGO_REF:0000002
ENSRNOG00000070004Ratribosome located_inIEAUniProtKB-KW:KW-06891600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ENSRNOG00000070004Rat5S rRNA binding enablesIEAInterPro:IPR0054851600115GO_REF:0000002InterProGO_REF:0000002
ENSRNOG00000070004Rat5S rRNA binding enablesIBAPANTHER:PTN000601661 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
ENSRNOG00000070004RatrRNA binding enablesIEAUniProtKB-KW:KW-06991600115GO_REF:0000043UniProtGO_REF:0000043
ENSRNOG00000070004Ratstructural constituent of ribosome enablesIBAFB:FBgn0064225 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
ENSRNOG00000070004Ratstructural constituent of ribosome enablesIEAInterPro:IPR0054851600115GO_REF:0000002InterProGO_REF:0000002



.

Ensembl Acc Id: ENSRNOT00000105456   ⟹   ENSRNOP00000092885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX47,263,245 - 47,264,783 (+)Ensembl
Ensembl Protein ENSRNOP00000092885.1
Ensembl Acc Id: ENSRNOP00000092885   ⟸   ENSRNOT00000105456
Large ribosomal subunit protein uL18 C-terminal


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 14 of 14 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSRNOG00000070004 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000105456.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.100 UniProtKB/TrEMBL
InterPro Rbsml_L5_euk/L18_arc UniProtKB/TrEMBL
  Rbsml_L5e_C UniProtKB/TrEMBL
PANTHER LARGE RIBOSOMAL SUBUNIT PROTEIN UL18 UniProtKB/TrEMBL
  PTHR23410 UniProtKB/TrEMBL
Pfam Ribosomal_L18_c UniProtKB/TrEMBL
  Ribosomal_L5e UniProtKB/TrEMBL
PhenoGen ENSRNOG00000070004 PhenoGen
PRINTS RIBOSOMALL5 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000070004 RatGTEx
Superfamily-SCOP Translational machinery components UniProtKB/TrEMBL
UniProt A0A8I6GKE4_RAT UniProtKB/TrEMBL
1 to 14 of 14 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-08-31 ENSRNOG00000070004        Symbol and Name status set to provisional 45752 PROVISIONAL