ENSRNOG00000067501 (null) - Rat Genome Database
Welcome
Sign In
Message Center
1 Messages
Go to Message Center
Watched Genes
Watched Ontology Terms
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
Subscribe to Updates
Select categories you would like to watch. Updates to this gene will be sent to Sign In
Analyze List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailable
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants)
unavailable
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
Summary
Annotation
Gene Ontology
References
Genomics
Expression
RNA-SEQ Expression
Sequence
Nucleotide Sequences
Reference Sequences
Protein Sequences
Reference Protein Sequences
Protein Domains
Transcriptome
Additional Information
External Database Links
Nomenclature History
Gene: ENSRNOG00000067501 (null) Rattus norvegicus
Subscribe to Updates
Analyze
General
Array IDs
Symbol:
ENSRNOG00000067501
Name:
RGD ID:
150341160
Description:
Predicted to enable calcium ion binding activity. Predicted to be involved in establishment of localization in cell. Predicted to be located in distal axon and myelin sheath.
Type:
protein_coding
Latest Assembly:
mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
mRatBN7.2 Ensembl
1
19,710,573 - 19,711,002 (+)
Ensembl
mRatBN7.2 Ensembl
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
Gene Ontology Annotations
Click to see Annotation Summary View
Biological Process
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Only show annotations with direct experimental evidence (0 objects hidden)
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ENSRNOG00000067501
Rat
establishment of localization in cell
involved_in
IEA
ARBA:ARBA00028679
1600115
GO_REF:0000117
UniProt
GO_REF:0000117
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Cellular Component
1 to 2 of 2 rows
10
20
30
40
100
All Rows
Only show annotations with direct experimental evidence (0 objects hidden)
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ENSRNOG00000067501
Rat
distal axon
located_in
IEA
ARBA:ARBA00045048
1600115
GO_REF:0000117
UniProt
GO_REF:0000117
ENSRNOG00000067501
Rat
myelin sheath
located_in
IEA
ARBA:ARBA00043641
1600115
GO_REF:0000117
UniProt
GO_REF:0000117
1 to 2 of 2 rows
10
20
30
40
100
All Rows
Molecular Function
1 to 2 of 2 rows
10
20
30
40
100
All Rows
Only show annotations with direct experimental evidence (0 objects hidden)
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ENSRNOG00000067501
Rat
calcium ion binding
enables
IEA
InterPro:IPR002048
1600115
GO_REF:0000002
InterPro
GO_REF:0000002
ENSRNOG00000067501
Rat
metal ion binding
enables
IEA
UniProtKB-KW:KW-0479
1600115
GO_REF:0000043
UniProt
GO_REF:0000043
1 to 2 of 2 rows
10
20
30
40
100
All Rows
Gene Ontology Annotations
Click to see Annotation Summary View
Biological Process
1 to 1 of 1 rows
10
20
30
40
100
All Rows
establishment of localization in cell
(IEA)
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Cellular Component
1 to 1 of 1 rows
10
20
30
40
100
All Rows
distal axon
(IEA)
myelin sheath
(IEA)
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Molecular Function
1 to 1 of 1 rows
10
20
30
40
100
All Rows
calcium ion binding
(IEA)
metal ion binding
(IEA)
1 to 1 of 1 rows
10
20
30
40
100
All Rows
References
Genomics
.
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Download All Expressed Objects for this Gene
Too many to show, limit is 500. Download them if you would like to view them all.
Strain/Cell Line
(Click to sort Ascending)
Sex
(Click to sort Ascending)
Age
(Click to sort Ascending)
Tissue
(Click to sort Ascending)
Geo Sample Id
(Click to sort Ascending)
Value
(Click to sort Ascending)
Unit
(Click to sort Ascending)
Assembly
(Click to sort Ascending)
Reference
(Click to sort Ascending)
Sequence
Nucleotide Sequences
3
5
10
20
30
100
All Rows
3
5
10
20
30
100
All Rows
Reference Sequences
0 to 0 of 0 rows
3
5
10
20
100
All Rows
Ensembl Acc Id:
ENSRNOT00000109335 ⟹ ENSRNOP00000094266
Type:
CODING
Position:
Rat Assembly
Chr
Position (strand)
Source
mRatBN7.2 Ensembl
1
19,710,573 - 19,711,002 (+)
Ensembl
0 to 0 of 0 rows
3
5
10
20
100
All Rows
Protein Sequences
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Ensembl Protein
ENSRNOP00000094266.1
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Reference Protein Sequences
1 to 1 of 1 rows
3
5
10
20
100
All Rows
1 to 1 of 1 rows
3
5
10
20
100
All Rows
Ensembl Acc Id:
ENSRNOP00000094266 ⟸ ENSRNOT00000109335
Protein Domains
EF-hand
Transcriptome
eQTL
View at Phenogen
WGCNA
View at Phenogen
Tissue/Strain Expression
View at Phenogen
Additional Information
External Database Links
1 to 17 of 17 rows
3
5
10
20
40
100
All Rows
Database
Acc Id
Source(s)
Ensembl Genes
ENSRNOG00000067501
Ensembl, UniProtKB/TrEMBL
Ensembl Transcript
ENSRNOT00000109335.1
UniProtKB/TrEMBL
Gene3D-CATH
EF-hand
UniProtKB/TrEMBL
InterPro
CALM/Myosin/TropC-like
UniProtKB/TrEMBL
EF-hand-dom_pair
UniProtKB/TrEMBL
EF_Hand_1_Ca_BS
UniProtKB/TrEMBL
EF_hand_dom
UniProtKB/TrEMBL
PANTHER
CALMODULIN LIKE 3
UniProtKB/TrEMBL
MYOSIN LIGHT CHAIN 1, 3
UniProtKB/TrEMBL
Pfam
EF-hand_7
UniProtKB/TrEMBL
PhenoGen
ENSRNOG00000067501
PhenoGen
PROSITE
EF_HAND_1
UniProtKB/TrEMBL
EF_HAND_2
UniProtKB/TrEMBL
RatGTEx
ENSRNOG00000067501
RatGTEx
SMART
EFh
UniProtKB/TrEMBL
Superfamily-SCOP
SSF47473
UniProtKB/TrEMBL
UniProt
A0A8I6GKN5_RAT
UniProtKB/TrEMBL
1 to 17 of 17 rows
3
5
10
20
40
100
All Rows
Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2021-08-31
ENSRNOG00000067501
Symbol and Name status set to provisional
45752
PROVISIONAL