Mir12179 (microRNA 12179) - Rat Genome Database

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Gene: Mir12179 (microRNA 12179) Mus musculus
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Symbol: Mir12179 (Ensembl: mmu-mir-12179)
Name: microRNA 12179 (Ensembl:mmu-mir-12179)
RGD ID: 15021681
MGI Page MGI
Description: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: Gm51282; mmu-mir-12179
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391177,407,018 - 177,407,095 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1177,407,018 - 177,407,095 (-)EnsemblGRCm39 Ensembl
GRCm381177,579,452 - 177,579,529 (-)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic Map1H4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:16381832   PMID:29079676  



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Variants in Mir12179
2 total Variants

1 to 10 of 95 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157456299191456436Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155526796189526897Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1167954584195154279Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152132744186132744Mouse
1301652Cpfd2_mcerebellum pattern fissures (mouse)Not determined1172303451195154279Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160097157194097157Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
4142389Scfr1_mstem cell frequency regulator 1 (mouse)Not determined171632048189303617Mouse

1 to 10 of 95 rows





RefSeq Transcripts NR_162777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC121297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000240533
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1177,407,018 - 177,407,095 (-)Ensembl
RefSeq Acc Id: NR_162777
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,407,018 - 177,407,095 (-)NCBI
GRCm381177,579,452 - 177,579,529 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000119707 Ensembl
MGD MGI:6364963 ENTREZGENE
miRBase MI0040617 ENTREZGENE
NCBI Gene Gm51282 ENTREZGENE
PhenoGen Mir12179 PhenoGen
RNAcentral URS0000D540CC RNACentral
  URS0000D56408 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-04-26 Mir12179  microRNA 12179  Gm51282  predicted gene, 51282  Symbol and/or name updated 27372883 PROVISIONAL