AC117058.1 (null) - Rat Genome Database

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Gene: AC117058.1 (null) Rattus norvegicus
Analyze
Symbol: AC117058.1
Name:
RGD ID: 15004880
Description:
Type: pseudogene
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl1676,657,753 - 76,659,108 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl1681,990,341 - 81,991,696 (-)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:144
Count of miRNA genes:108
Interacting mature miRNAs:117
Transcripts:ENSRNOT00000071773
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000071773
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1676,657,753 - 76,659,108 (-)Ensembl
Rnor_6.0 Ensembl1681,990,341 - 81,991,696 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000045729 Ensembl
PhenoGen AC117058.1 PhenoGen
RatGTEx ENSRNOG00000045729 RatGTEx


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AC117058.1        Symbol and Name status set to provisional 45752 PROVISIONAL