AABR07026291.1 (null) - Rat Genome Database

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Gene: AABR07026291.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07026291.1
Name:
RGD ID: 15003412
Description: ENCODES a protein that exhibits dynactin binding (inferred); dynein intermediate chain binding (inferred); dynein light chain binding (inferred); INVOLVED IN early endosome to late endosome transport (inferred); endosome organization (inferred); endosome to lysosome transport (inferred); FOUND IN cis-Golgi network (inferred); cytosol (inferred); FHF complex (inferred)
Type: protein-coding
Latest Assembly: Rnor_6.0 Ensembl - RGSC Genome Assembly v6.0 Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl1670,778,913 - 70,831,164 (+)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 22 28 12 17 12 8 8 67 28 35 11 8
Low 3 21 29 29 2 29 3 7 7 6
Below cutoff

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000019281   ⟹   ENSRNOP00000019281
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1670,778,913 - 70,831,164 (+)Ensembl
Protein Sequences
Reference Sequences
RefSeq Acc Id: ENSRNOP00000019281   ⟸   ENSRNOT00000019281
Protein Domains
HOOK

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000014275 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000019281 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019281 UniProtKB/TrEMBL
InterPro Hook-like_fam UniProtKB/TrEMBL
Pfam HOOK UniProtKB/TrEMBL
PhenoGen AABR07026291.1 PhenoGen
UniProt Q7TQ77_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07026291.1        Symbol and Name status set to provisional 45752 PROVISIONAL