Gm24537 (predicted gene, 24537) - Rat Genome Database

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Gene: Gm24537 (predicted gene, 24537) Mus musculus
Analyze
No known orthologs.
Symbol: Gm24537
Name: predicted gene, 24537
RGD ID: 15001976
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3974,741,831 - 4,741,932 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl74,741,831 - 4,741,932 (+)EnsemblGRCm39 Ensembl
GRCm3874,738,832 - 4,738,933 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl74,738,832 - 4,738,933 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map7A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:53
Count of miRNA genes:50
Interacting mature miRNAs:52
Transcripts:ENSMUST00000157950
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
25394570Skmw58_mskeletal muscle weight 58, TA (mouse)735524286281481Mouse
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
25394569Skmw57_mskeletal muscle weight 57, gastroc (mouse)7458046916687861Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004934459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC161197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000157950
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl74,741,831 - 4,741,932 (+)Ensembl
GRCm38.p6 Ensembl74,738,832 - 4,738,933 (+)Ensembl
RefSeq Acc Id: XR_004934459
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3974,741,831 - 4,741,932 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000088575 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000157950 ENTREZGENE
MGD MGI:5454314 ENTREZGENE
NCBI Gene Gm24537 ENTREZGENE
PhenoGen Gm24537 PhenoGen