Gm23055 (predicted gene, 23055) - Rat Genome Database

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Gene: Gm23055 (predicted gene, 23055) Mus musculus
Analyze
Symbol: Gm23055
Name: predicted gene, 23055
RGD ID: 14997594
MGI Page MGI
Description:
Type: pseudo (Ensembl: snRNA)
RefSeq Status: MODEL
RGD Orthologs
Human
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394132,169,345 - 132,169,438 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4132,169,345 - 132,169,438 (+)EnsemblGRCm39 Ensembl
GRCm384132,442,034 - 132,442,127 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4132,442,034 - 132,442,127 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map4D2.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gm23055
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394132,169,345 - 132,169,438 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4132,169,345 - 132,169,438 (+)EnsemblGRCm39 Ensembl
GRCm384132,442,034 - 132,442,127 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4132,442,034 - 132,442,127 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map4D2.3NCBI
RNU6-366P
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381492,265,702 - 92,265,807 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1492,265,702 - 92,265,807 (+)EnsemblGRCh38hg38GRCh38
GRCh371492,732,046 - 92,732,151 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map14q32.12NCBI
CHM1_11492,670,663 - 92,670,768 (+)NCBICHM1_1
T2T-CHM13v2.01486,495,452 - 86,495,557 (+)NCBIT2T-CHM13v2.0

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Variants in Gm23055
11 total Variants

Predicted Target Of
Summary Value
Count of predictions:124
Count of miRNA genes:121
Interacting mature miRNAs:124
Transcripts:ENSMUST00000082805
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 70 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
25394567Skmw55_mskeletal muscle weight 55, gastroc (mouse)4131437804133710576Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
14696808Rbcn1_mrod bipolar cell number 1 (mouse)4131947311134047311Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
25394568Skmw56_mskeletal muscle weight 56, EDL (mouse)4129859344133710576Mouse

1 to 10 of 70 rows





GenBank Nucleotide AL805897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000082805
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4132,169,345 - 132,169,438 (+)Ensembl
GRCm38.p6 Ensembl4132,442,034 - 132,442,127 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000064739 Ensembl, ENTREZGENE
MGD MGI:5452832 ENTREZGENE
NCBI Gene Gm23055 ENTREZGENE
PhenoGen Gm23055 PhenoGen
RNAcentral URS00006A027E RNACentral