NAGK (N-acetylglucosamine kinase) - Rat Genome Database

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Gene: NAGK (N-acetylglucosamine kinase) Sus scrofa
Analyze
Symbol: NAGK
Name: N-acetylglucosamine kinase
RGD ID: 14281357
Description: ENCODES a protein that exhibits N-acylmannosamine kinase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH dystonia (ortholog); Experimental Liver Cirrhosis (ortholog); Methylmalonyl-CoA Epimerase Deficiency (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: N-acetyl-D-glucosamine kinase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl371,500,337 - 71,512,955 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1371,496,191 - 71,513,020 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2374,946,433 - 74,959,118 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NAGK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl371,500,337 - 71,512,955 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1371,496,191 - 71,513,020 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2374,946,433 - 74,959,118 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NAGK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38271,068,296 - 71,079,808 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl271,064,344 - 71,079,808 (+)EnsemblGRCh38hg38GRCh38
GRCh37271,295,426 - 71,306,938 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36271,148,955 - 71,159,279 (+)NCBINCBI36Build 36hg18NCBI36
Build 34271,207,101 - 71,217,426NCBI
Celera271,146,088 - 71,156,678 (+)NCBICelera
Cytogenetic Map2p13.3NCBI
HuRef271,031,829 - 71,042,418 (+)NCBIHuRef
CHM1_1271,224,728 - 71,235,318 (+)NCBICHM1_1
T2T-CHM13v2.0271,079,325 - 71,090,837 (+)NCBIT2T-CHM13v2.0
Nagk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39683,770,810 - 83,779,538 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl683,771,964 - 83,781,000 (+)EnsemblGRCm39 Ensembl
GRCm38683,794,983 - 83,802,556 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl683,794,982 - 83,804,018 (+)EnsemblGRCm38mm10GRCm38
MGSCv37683,745,051 - 83,752,550 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36683,760,715 - 83,768,214 (+)NCBIMGSCv36mm8
Celera685,778,192 - 85,785,696 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.96NCBI
Nagk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84117,838,761 - 117,846,304 (+)NCBIGRCr8
mRatBN7.24116,281,179 - 116,293,870 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4116,281,328 - 116,313,137 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4121,759,847 - 121,767,170 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04117,535,038 - 117,542,361 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04116,148,820 - 116,156,143 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04115,473,848 - 115,485,027 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4115,473,811 - 115,481,438 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04180,063,057 - 180,074,241 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44117,989,937 - 117,997,260 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14118,234,435 - 118,242,566 (+)NCBI
Celera4105,273,931 - 105,281,254 (+)NCBICelera
Cytogenetic Map4q34NCBI
Nagk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542414,205,813 - 14,215,156 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542414,205,689 - 14,215,201 (-)NCBIChiLan1.0ChiLan1.0
NAGK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21255,308,450 - 55,318,837 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A55,304,932 - 55,321,577 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A71,114,832 - 71,125,182 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A72,616,072 - 72,626,435 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A72,616,077 - 72,626,435 (+)Ensemblpanpan1.1panPan2
NAGK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11751,367,477 - 51,376,461 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1751,105,625 - 51,114,621 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01752,328,061 - 52,337,018 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1752,328,068 - 52,337,024 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11751,330,536 - 51,339,383 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01751,402,356 - 51,411,380 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01751,977,092 - 51,986,120 (-)NCBIUU_Cfam_GSD_1.0
Nagk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629213,378,222 - 13,387,818 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649115,183,804 - 15,192,950 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649115,183,493 - 15,193,069 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAGK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11436,086,624 - 36,098,465 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1436,082,137 - 36,096,914 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604575,929,507 - 75,940,845 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nagk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247622,382,709 - 2,391,656 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247622,382,708 - 2,391,896 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NAGK
383 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000038053   ⟹   ENSSSCP00000032629
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl371,502,789 - 71,511,385 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000040559   ⟹   ENSSSCP00000046926
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl371,500,337 - 71,512,955 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000055872   ⟹   ENSSSCP00000052135
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl371,500,337 - 71,511,385 (-)Ensembl
RefSeq Acc Id: XM_003125043   ⟹   XP_003125091
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1371,497,537 - 71,513,020 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005662479   ⟹   XP_005662536
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1371,497,537 - 71,512,977 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005662480   ⟹   XP_005662537
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1371,497,537 - 71,512,978 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021087390   ⟹   XP_020943049
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1371,497,537 - 71,512,953 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002342578
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1371,496,191 - 71,512,989 (-)NCBI
Sequence:
RefSeq Acc Id: XP_003125091   ⟸   XM_003125043
- Peptide Label: isoform X1
- UniProtKB: A0A4X1W9F7 (UniProtKB/TrEMBL),   A0A286ZMD1 (UniProtKB/TrEMBL),   A0A480KE10 (UniProtKB/TrEMBL),   A0A8D0LUC5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005662537   ⟸   XM_005662480
- Peptide Label: isoform X2
- UniProtKB: A0A286ZMD1 (UniProtKB/TrEMBL),   A0A480KE10 (UniProtKB/TrEMBL),   A0A8D0LUC5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005662536   ⟸   XM_005662479
- Peptide Label: isoform X2
- UniProtKB: A0A286ZMD1 (UniProtKB/TrEMBL),   A0A480KE10 (UniProtKB/TrEMBL),   A0A8D0LUC5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020943049   ⟸   XM_021087390
- Peptide Label: isoform X2
- UniProtKB: A0A286ZMD1 (UniProtKB/TrEMBL),   A0A480KE10 (UniProtKB/TrEMBL),   A0A8D0LUC5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000046926   ⟸   ENSSSCT00000040559
Ensembl Acc Id: ENSSSCP00000052135   ⟸   ENSSSCT00000055872
Ensembl Acc Id: ENSSSCP00000032629   ⟸   ENSSSCT00000038053
Protein Domains
ATPase BadF/BadG/BcrA/BcrD type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000008316 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005034424 UniProtKB/TrEMBL
  ENSSSCG00015028135 UniProtKB/TrEMBL
  ENSSSCG00025052273 UniProtKB/TrEMBL
  ENSSSCG00030036715 UniProtKB/TrEMBL
  ENSSSCG00035025160 UniProtKB/TrEMBL
  ENSSSCG00040054016 UniProtKB/TrEMBL
  ENSSSCG00045000987 UniProtKB/TrEMBL
  ENSSSCG00050049189 UniProtKB/TrEMBL
  ENSSSCG00055004467 UniProtKB/TrEMBL
  ENSSSCG00060045429 UniProtKB/TrEMBL
  ENSSSCG00065036823 UniProtKB/TrEMBL
  ENSSSCG00070029686 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000038053 ENTREZGENE
  ENSSSCT00000038053.3 UniProtKB/TrEMBL
  ENSSSCT00000040559.2 UniProtKB/TrEMBL
  ENSSSCT00000055872.3 UniProtKB/TrEMBL
  ENSSSCT00005055216.1 UniProtKB/TrEMBL
  ENSSSCT00015037664.1 UniProtKB/TrEMBL
  ENSSSCT00025071625.1 UniProtKB/TrEMBL
  ENSSSCT00025071846.1 UniProtKB/TrEMBL
  ENSSSCT00030051111.1 UniProtKB/TrEMBL
  ENSSSCT00030051178.1 UniProtKB/TrEMBL
  ENSSSCT00035033105.1 UniProtKB/TrEMBL
  ENSSSCT00035033113.1 UniProtKB/TrEMBL
  ENSSSCT00040073302.1 UniProtKB/TrEMBL
  ENSSSCT00040073480.1 UniProtKB/TrEMBL
  ENSSSCT00045001506.1 UniProtKB/TrEMBL
  ENSSSCT00050066932.1 UniProtKB/TrEMBL
  ENSSSCT00055008825.1 UniProtKB/TrEMBL
  ENSSSCT00060061635.1 UniProtKB/TrEMBL
  ENSSSCT00060061647.1 UniProtKB/TrEMBL
  ENSSSCT00065050248.1 UniProtKB/TrEMBL
  ENSSSCT00065050262.1 UniProtKB/TrEMBL
  ENSSSCT00065050279.1 UniProtKB/TrEMBL
  ENSSSCT00070059691.1 UniProtKB/TrEMBL
  ENSSSCT00070059713.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.40 UniProtKB/TrEMBL
InterPro ATPase_BadF UniProtKB/TrEMBL
  ATPase_NBD UniProtKB/TrEMBL
  NAGK_prok_euk UniProtKB/TrEMBL
KEGG Report ssc:100523729 UniProtKB/TrEMBL
NCBI Gene NAGK ENTREZGENE
PANTHER N-ACETYL-D-GLUCOSAMINE KINASE UniProtKB/TrEMBL
  PTHR12862 UniProtKB/TrEMBL
Pfam BcrAD_BadFG UniProtKB/TrEMBL
Superfamily-SCOP SSF53067 UniProtKB/TrEMBL
UniProt A0A286ZMD1 ENTREZGENE
  A0A287AS72_PIG UniProtKB/TrEMBL
  A0A287B759_PIG UniProtKB/TrEMBL
  A0A480KE10 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1W8Z3_PIG UniProtKB/TrEMBL
  A0A4X1W9F7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0LUC5 ENTREZGENE
UniProt Secondary A0A286ZMD1 UniProtKB/TrEMBL
  A0A8D0LUC5 UniProtKB/TrEMBL
VGNC ID VGNC:90570 ENTREZGENE