LYRM1 (LYR motif containing 1) - Rat Genome Database

Name: LYRM1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: LYRM1 (LYR motif containing 1) Sus scrofa

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Symbol:

LYRM1

Name:

LYR motif containing 1

RGD ID:

14182756

Description:

FOUND IN mitochondrion (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LYR motif-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	LYRM1 (LYR motif containing 1)	HGNC	EggNOG, Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LYRM1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LYRM1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LYRM1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	25,126,270 - 25,136,889 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	25,130,150 - 25,152,012 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	25,917,676 - 25,938,678 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

midbody (IEA)

mitochondrion (ISO)

nucleoplasm (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:15679890	PMID:17145712	PMID:30032202

Genomics

Comparative Map Data

LYRM1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	25,126,270 - 25,136,889 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	25,130,150 - 25,152,012 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	25,917,676 - 25,938,678 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LYRM1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	20,899,882 - 20,925,006 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	20,899,868 - 20,925,006 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	20,911,204 - 20,936,328 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	20,819,927 - 20,843,829 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	16	20,221,438 - 20,246,212 (+)	NCBI		Celera
Cytogenetic Map	16	p12.3	NCBI
HuRef	16	19,446,825 - 19,471,594 (+)	NCBI		HuRef
CHM1_1	16	20,998,787 - 21,023,554 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	20,830,796 - 20,855,920 (+)	NCBI		T2T-CHM13v2.0

Lyrm1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	119,495,038 - 119,515,979 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	119,495,084 - 119,556,186 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	119,895,713 - 119,916,756 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	119,895,861 - 119,956,963 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	127,039,806 - 127,060,264 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	119,687,441 - 119,707,899 (+)	NCBI		MGSCv36	mm8
Celera	7	119,815,577 - 119,836,052 (+)	NCBI		Celera
Cytogenetic Map	7	F2	NCBI
cM Map	7	64.31	NCBI

Lyrm1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	183,715,941 - 183,736,406 (+)	NCBI		GRCr8
mRatBN7.2	1	174,284,116 - 174,305,053 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	174,284,602 - 174,305,053 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	182,600,704 - 182,620,566 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	189,786,746 - 189,806,606 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	182,522,290 - 182,542,138 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	189,665,401 - 189,685,842 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	189,665,976 - 189,685,842 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	196,599,679 - 196,620,114 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	178,216,553 - 178,265,367 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	172,034,533 - 172,054,364 (+)	NCBI		Celera
Cytogenetic Map	1	q35	NCBI

Lyrm1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955493	186,550 - 208,082 (+)	NCBI	ChiLan1.0	ChiLan1.0

LYRM1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	22,067,620 - 22,092,306 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	26,588,243 - 26,612,863 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,712 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	20,931,197 - 20,956,100 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	20,946,553 - 20,956,100 (+)	Ensembl	panpan1.1		panPan2

LYRM1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	24,428,461 - 24,460,291 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	24,441,307 - 24,460,331 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	25,868,397 - 25,900,268 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	24,596,569 - 24,616,327 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	24,596,569 - 24,616,221 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	24,385,331 - 24,417,333 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	24,280,573 - 24,312,447 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	24,664,537 - 24,696,557 (-)	NCBI		UU_Cfam_GSD_1.0

Lyrm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	118,071,166 - 118,092,805 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	6,168,838 - 6,190,667 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	6,168,844 - 6,189,987 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LYRM1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	19,036,212 - 19,060,619 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	19,037,083 - 19,060,751 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	10,845,582 - 10,870,314 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lyrm1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624782	7,063,261 - 7,071,530 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624782	7,049,918 - 7,079,714 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in LYRM1
425 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005662093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005662094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005662096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021086518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021086519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY609502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU464004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01103307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000008603 ⟹ ENSSSCP00000008382

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	25,126,270 - 25,136,889 (-)	Ensembl

RefSeq Acc Id:

XM_005662093 ⟹ XP_005662150

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	25,130,150 - 25,151,130 (-)	NCBI

Sequence:

show sequence

CCCACGGAGGTTCGTCTGGTGGTTTGGTCTGGCCTGGCCTACCGGACCTGCTTAAGCTCTGTCG
ACCACGGCTCAGCTGGGCTCCCGGCGCCGCCTCCTCCCAGTCTGCCGTAGGCTGCGGCGCTTCT
GTGGGTGGGGGAAGGCTGGACTGACGCAGATAGAAGGCAAGGCCTCATGGGACTCCAACATTTG
GAATTTTGACATTCCTGAGACCAGAGTCATACTTCTATAAATTTCATCCAAGGAACAGGAATTT
TCATCTCTGCCCTTAAACTCCTCAGTGTTCATGCAGTGATGGTCTTTCCACAGATGACAACGGC
AACACGACAAGAAGTTCTTGGCCTCTACCGCAGAATTTTCAGGCTTGCGAGGAAATGGCAGGCT
GCATCAGGGCAGATGGAAGACACCGTGAAAGAGAAACAGTACATATTAAATGAAGCCAGAACGC
TGTTCCAGAAAAACAAAAATCTCACAGACACAGACCTGATTAAACGGTGTATAGATGAATGCAC
AGCCAGGATTGAAATGGGACTCCACTACCAGATTCCCTATCCAAGGCCAATTCATCTGCCTCCT
ATGGGCCTTACCCCACTACGAGGCCGGGGACTTCGAAGCCAGGAGAAACTAAGGAAATTTTCCA
AACCAGTATATCTCCAGTCTCACGATGAGGTTTCCTAACCCAGAAGAAAGTTTATTTCTGAGAA
TGATGAGTCAAGTAGGCCTTGAATGTAAACCAGATAACAGAAGCAAAAATTAAAATATCTTCTT
AGAAACCTC

hide sequence

RefSeq Acc Id:

XM_005662094 ⟹ XP_005662151

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	25,130,150 - 25,151,130 (-)	NCBI

Sequence:

show sequence

CCCACGGAGGTTCGTCTGGTGGTTTGGTCTGGCCTGGCCTACCGGACCTGCTTAAGCTCTGTCG
ACCACGGCTCAGCTGGGCTCCCGGCGCCGCCTCCTCCCAGTCTGCCGTAGGCTGCGGCGCTTCT
GTGGGTGGGGGAAGGCTGGACTGACGCAGAAAGGCAAGGCCTCATGGGACTCCAACATTTGGAA
TTTTGACATTCCTGAGACCAGAGTCATACTTCTATAAATTTCATCCAAGGAACAGGAATTTTCA
TCTCTGCCCTTAAACTCCTCAGTGTTCATGCAGTGATGGTCTTTCCACAGATGACAACGGCAAC
ACGACAAGAAGTTCTTGGCCTCTACCGCAGAATTTTCAGGCTTGCGAGGAAATGGCAGGCTGCA
TCAGGGCAGATGGAAGACACCGTGAAAGAGAAACAGTACATATTAAATGAAGCCAGAACGCTGT
TCCAGAAAAACAAAAATCTCACAGACACAGACCTGATTAAACGGTGTATAGATGAATGCACAGC
CAGGATTGAAATGGGACTCCACTACCAGATTCCCTATCCAAGGCCAATTCATCTGCCTCCTATG
GGCCTTACCCCACTACGAGGCCGGGGACTTCGAAGCCAGGAGAAACTAAGGAAATTTTCCAAAC
CAGTATATCTCCAGTCTCACGATGAGGTTTCCTAACCCAGAAGAAAGTTTATTTCTGAGAATGA
TGAGTCAAGTAGGCCTTGAATGTAAACCAGATAACAGAAGCAAAAATTAAAATATCTTCTTAGA
AACCTC

hide sequence

RefSeq Acc Id:

XM_005662096 ⟹ XP_005662153

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	25,130,150 - 25,151,153 (-)	NCBI

Sequence:

show sequence

ACCCCCGACCTGGTACGAATGCTCCCACGGAGGTTCGTCTGGTGGTTTGGTCTGGCCTGGCCTA
CCGGACCTGCTTAAGCTCTGTCGACCACGGCTCAGCTGGGCTCCCGGCGCCGCCTCCTCCCAGT
CTGCCGTAGGCTGCGGCGCTTCTGTGGGTGGGGGAAGGCTGGACTGACGCAGAATGACAACGGC
AACACGACAAGAAGTTCTTGGCCTCTACCGCAGAATTTTCAGGCTTGCGAGGAAATGGCAGGCT
GCATCAGGGCAGATGGAAGACACCGTGAAAGAGAAACAGTACATATTAAATGAAGCCAGAACGC
TGTTCCAGAAAAACAAAAATCTCACAGACACAGACCTGATTAAACGGTGTATAGATGAATGCAC
AGCCAGGATTGAAATGGGACTCCACTACCAGATTCCCTATCCAAGGCCAATTCATCTGCCTCCT
ATGGGCCTTACCCCACTACGAGGCCGGGGACTTCGAAGCCAGGAGAAACTAAGGAAATTTTCCA
AACCAGTATATCTCCAGTCTCACGATGAGGTTTCCTAACCCAGAAGAAAGTTTATTTCTGAGAA
TGATGAGTCAAGTAGGCCTTGAATGTAAACCAGATAACAGAAGCAAAAATTAAAATATCTTCTT
AGAAACCTC

hide sequence

RefSeq Acc Id:

XM_021086518 ⟹ XP_020942177

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	25,130,154 - 25,152,012 (-)	NCBI

Sequence:

show sequence

CCTCACTGCACTTACCAGGGGCAGAAGACTAGAGTTTGCACTCCCTCCAGGGCAGCTCCGGCCC
CCAGAGCCCCAGGCCTTGGGTGGCGGGTGGGGGGTGCCGGCGGTGGAGGGGCAGAGACAGTAGA
TGACAACGGCAACACGACAAGAAGTTCTTGGCCTCTACCGCAGAATTTTCAGGCTTGCGAGGAA
ATGGCAGGCTGCATCAGGGCAGATGGAAGACACCGTGAAAGAGAAACAGTACATATTAAATGAA
GCCAGAACGCTGTTCCAGAAAAACAAAAATCTCACAGACACAGACCTGATTAAACGGTGTATAG
ATGAATGCACAGCCAGGATTGAAATGGGACTCCACTACCAGATTCCCTATCCAAGGCCAATTCA
TCTGCCTCCTATGGGCCTTACCCCACTACGAGGCCGGGGACTTCGAAGCCAGGAGAAACTAAGG
AAATTTTCCAAACCAGTATATCTCCAGTCTCACGATGAGGTTTCCTAACCCAGAAGAAAGTTTA
TTTCTGAGAATGATGAGTCAAGTAGGCCTTGAATGTAAACCAGATAACAGAAGCAAAAATTAAA
ATATCTTCTTAGAAA

hide sequence

RefSeq Acc Id:

XM_021086519 ⟹ XP_020942178

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	25,130,150 - 25,151,372 (-)	NCBI

Sequence:

show sequence

CGTACGAAGCCGTCGCCAAATGACAACGGCAACACGACAAGAAGTTCTTGGCCTCTACCGCAGA
ATTTTCAGGCTTGCGAGGAAATGGCAGGCTGCATCAGGGCAGATGGAAGACACCGTGAAAGAGA
AACAGTACATATTAAATGAAGCCAGAACGCTGTTCCAGAAAAACAAAAATCTCACAGACACAGA
CCTGATTAAACGGTGTATAGATGAATGCACAGCCAGGATTGAAATGGGACTCCACTACCAGATT
CCCTATCCAAGGCCAATTCATCTGCCTCCTATGGGCCTTACCCCACTACGAGGCCGGGGACTTC
GAAGCCAGGAGAAACTAAGGAAATTTTCCAAACCAGTATATCTCCAGTCTCACGATGAGGTTTC
CTAACCCAGAAGAAAGTTTATTTCTGAGAATGATGAGTCAAGTAGGCCTTGAATGTAAACCAGA
TAACAGAAGCAAAAATTAAAATATCTTCTTAGAAACCTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005662150	(Get FASTA)	NCBI Sequence Viewer
	XP_005662151	(Get FASTA)	NCBI Sequence Viewer
	XP_005662153	(Get FASTA)	NCBI Sequence Viewer
	XP_020942177	(Get FASTA)	NCBI Sequence Viewer
	XP_020942178	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000008382
	ENSSSCP00000008382.3
	ENSSSCP00030011709.1
	ENSSSCP00035010408.1
	ENSSSCP00060038997.1
	ENSSSCP00065042438.1

RefSeq Acc Id:	XP_020942178 ⟸ XM_021086519
- Peptide Label:	isoform X2
- UniProtKB:	A0A480UD68 (UniProtKB/TrEMBL), A0A8D2A5P9 (UniProtKB/TrEMBL), A0A8D0VUN9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTATRQEVLGLYRRIFRLARKWQAASGQMEDTVKEKQYILNEARTLFQKNKNLTDTDLIKRCI DECTARIEMGLHYQIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKFSKPVYLQSHDEVS hide sequence

RefSeq Acc Id:	XP_005662153 ⟸ XM_005662096
- Peptide Label:	isoform X2
- UniProtKB:	A0A480UD68 (UniProtKB/TrEMBL), A0A8D2A5P9 (UniProtKB/TrEMBL), A0A8D0VUN9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTATRQEVLGLYRRIFRLARKWQAASGQMEDTVKEKQYILNEARTLFQKNKNLTDTDLIKRCI DECTARIEMGLHYQIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKFSKPVYLQSHDEVS hide sequence

RefSeq Acc Id:	XP_005662151 ⟸ XM_005662094
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0Z678 (UniProtKB/TrEMBL), A0A8D0VUN9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVFPQMTTATRQEVLGLYRRIFRLARKWQAASGQMEDTVKEKQYILNEARTLFQKNKNLTDTDL IKRCIDECTARIEMGLHYQIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKFSKPVYLQSHDEVS hide sequence

RefSeq Acc Id:	XP_005662150 ⟸ XM_005662093
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0Z678 (UniProtKB/TrEMBL), A0A8D0VUN9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVFPQMTTATRQEVLGLYRRIFRLARKWQAASGQMEDTVKEKQYILNEARTLFQKNKNLTDTDL IKRCIDECTARIEMGLHYQIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKFSKPVYLQSHDEVS hide sequence

RefSeq Acc Id:	XP_020942177 ⟸ XM_021086518
- Peptide Label:	isoform X2
- UniProtKB:	A0A480UD68 (UniProtKB/TrEMBL), A0A8D2A5P9 (UniProtKB/TrEMBL), A0A8D0VUN9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTATRQEVLGLYRRIFRLARKWQAASGQMEDTVKEKQYILNEARTLFQKNKNLTDTDLIKRCI DECTARIEMGLHYQIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKFSKPVYLQSHDEVS hide sequence

Ensembl Acc Id:

ENSSSCP00000008382 ⟸ ENSSSCT00000008603

Protein Domains

Complex 1 LYR protein

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000007853	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00030018956	UniProtKB/TrEMBL
	ENSSSCG00035020918	UniProtKB/TrEMBL
	ENSSSCG00060065880	UniProtKB/TrEMBL
	ENSSSCG00065070542	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000008603	ENTREZGENE
	ENSSSCT00000008603.4	UniProtKB/TrEMBL
	ENSSSCT00030026197.1	UniProtKB/TrEMBL
	ENSSSCT00035027227.1	UniProtKB/TrEMBL
	ENSSSCT00060090038.1	UniProtKB/TrEMBL
	ENSSSCT00065096892.1	UniProtKB/TrEMBL
InterPro	Complex1_LYR	UniProtKB/TrEMBL
	Complex1_LYR_LYRM1	UniProtKB/TrEMBL
	LYRM1	UniProtKB/TrEMBL
KEGG Report	ssc:100525810	UniProtKB/TrEMBL
NCBI Gene	LYRM1	ENTREZGENE
PANTHER	LYR MOTIF-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	PTHR14273	UniProtKB/TrEMBL
Pfam	Complex1_LYR	UniProtKB/TrEMBL
UniProt	A0A480UD68	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0VUN9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0Z678	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D2A5P9	ENTREZGENE, UniProtKB/TrEMBL
	F1RPB6_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:89915	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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