LOC110258046 (pancreatic alpha-amylase-like) - Rat Genome Database

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Gene: LOC110258046 (pancreatic alpha-amylase-like) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC110258046
Name: pancreatic alpha-amylase-like
RGD ID: 14147127
Description: ENCODES a protein that exhibits alpha-amylase activity (inferred); amylase activity (inferred); cation binding (inferred); INVOLVED IN carbohydrate metabolic process (inferred); FOUND IN extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position: No map positions available.


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 1 1
Below cutoff 6 4 3 4 1 18 2 2 1

Sequence


Protein Sequences
Protein RefSeqs XP_020936675 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936676 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936677 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936678 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000023468
  ENSSSCP00000023468.2
  ENSSSCP00070016272.1
Protein Domains
Alpha-amylase C-terminal   Glycosyl hydrolase family 13 catalytic


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000031311 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070010072 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000029569 ENTREZGENE
  ENSSSCT00000029569.4 UniProtKB/TrEMBL
  ENSSSCT00070019564.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.1180 UniProtKB/TrEMBL
  Glycosidases UniProtKB/TrEMBL
InterPro A-amylase/branching_C UniProtKB/TrEMBL
  A-amylase_C UniProtKB/TrEMBL
  Alpha_amylase UniProtKB/TrEMBL
  Glyco_hydro_13_cat_dom UniProtKB/TrEMBL
  Glyco_hydro_b UniProtKB/TrEMBL
  Glycoside_hydrolase_SF UniProtKB/TrEMBL
NCBI Gene LOC110258046 ENTREZGENE
PANTHER ALPHA-AMYLASE UniProtKB/TrEMBL
  ALPHA-AMYLASE UniProtKB/TrEMBL
Pfam Alpha-amylase UniProtKB/TrEMBL
  Alpha-amylase_C UniProtKB/TrEMBL
PRINTS ALPHAAMYLASE UniProtKB/TrEMBL
SMART Aamy UniProtKB/TrEMBL
  Aamy_C UniProtKB/TrEMBL
Superfamily-SCOP Glycosyl hydrolase domain UniProtKB/TrEMBL
  SSF51445 UniProtKB/TrEMBL
UniProt A0A480N2X2 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1THW3 ENTREZGENE, UniProtKB/TrEMBL
  I3LHC3 ENTREZGENE, UniProtKB/TrEMBL