ZNF185 (zinc finger protein 185 with LIM domain) - Rat Genome Database

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Gene: ZNF185 (zinc finger protein 185 with LIM domain) Sus scrofa
Analyze
Symbol: ZNF185
Name: zinc finger protein 185 with LIM domain
RGD ID: 14125002
Description: ENCODES a protein that exhibits metal ion binding (inferred); ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); autosomal hemophilia A (ortholog); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: zinc finger protein 185; zinc finger protein 185 (LIM domain)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX123,944,210 - 123,987,962 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X123,942,981 - 123,988,102 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X141,414,957 - 141,458,745 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712  


Genomics

Comparative Map Data
ZNF185
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX123,944,210 - 123,987,962 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X123,942,981 - 123,988,102 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X141,414,957 - 141,458,745 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF185
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X152,898,067 - 152,973,481 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX152,898,067 - 152,973,481 (+)EnsemblGRCh38hg38GRCh38
GRCh37X152,066,611 - 152,142,025 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X151,833,653 - 151,892,678 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X151,757,232 - 151,812,583NCBI
CeleraX152,417,145 - 152,476,190 (+)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX140,883,699 - 140,942,530 (+)NCBIHuRef
CHM1_1X151,957,910 - 152,016,969 (+)NCBICHM1_1
T2T-CHM13v2.0X151,164,487 - 151,239,920 (+)NCBIT2T-CHM13v2.0
Zfp185
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X72,030,860 - 72,075,149 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX72,030,945 - 72,075,149 (+)EnsemblGRCm39 Ensembl
GRCm38X72,987,252 - 73,031,543 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX72,987,339 - 73,031,543 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X70,232,678 - 70,276,882 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X69,250,502 - 69,284,232 (+)NCBIMGSCv36mm8
CeleraX63,910,727 - 63,955,718 (+)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX37.29NCBI
Zfp185
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X155,874,138 - 155,919,921 (+)NCBIGRCr8
mRatBN7.2X150,831,869 - 150,877,652 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX150,831,862 - 150,874,810 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X152,989,099 - 153,034,289 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX152,999,016 - 153,031,444 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01148,718,734 - 148,763,867 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X158,990,740 - 159,024,426 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1131,796,229 - 131,841,934 (+)NCBICelera
Cytogenetic MapXq37NCBI
Znf185
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554988,185,994 - 8,253,209 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554988,185,997 - 8,248,910 (+)NCBIChiLan1.0ChiLan1.0
ZNF185
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X152,962,326 - 153,037,654 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X152,965,929 - 153,041,257 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X142,472,497 - 142,547,835 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X152,391,505 - 152,467,150 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX152,391,505 - 152,464,221 (+)Ensemblpanpan1.1panPan2
ZNF185
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X120,770,099 - 120,846,855 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX120,782,011 - 120,843,322 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX106,150,793 - 106,215,089 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X123,006,936 - 123,071,169 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX123,006,426 - 123,067,652 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X119,723,086 - 119,787,382 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X122,213,729 - 122,277,932 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X122,088,803 - 122,153,011 (+)NCBIUU_Cfam_GSD_1.0
Znf185
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X118,006,648 - 118,104,290 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936714152,319 - 218,921 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936714167,552 - 218,785 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF185
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X127,418,209 - 127,493,217 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606565,244,826 - 65,316,227 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf185
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248834,084,196 - 4,140,508 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248834,084,018 - 4,140,308 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF185
429 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 5 14 12 23 3 6 1

Sequence


Ensembl Acc Id: ENSSSCT00000013949   ⟹   ENSSSCP00000013566
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,321 - 123,987,962 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000027243   ⟹   ENSSSCP00000023330
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,321 - 123,987,962 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000072686   ⟹   ENSSSCP00000063521
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,321 - 123,987,962 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000073551   ⟹   ENSSSCP00000061109
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,210 - 123,987,962 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000074209   ⟹   ENSSSCP00000062150
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,321 - 123,987,962 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000077387   ⟹   ENSSSCP00000071592
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,321 - 123,987,962 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000081150   ⟹   ENSSSCP00000072644
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,321 - 123,987,962 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000082489   ⟹   ENSSSCP00000061203
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,321 - 123,987,962 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000094595   ⟹   ENSSSCP00000075153
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX123,944,321 - 123,987,962 (+)Ensembl
RefSeq Acc Id: XM_013986494   ⟹   XP_013841948
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,954,292 - 123,988,096 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013986496   ⟹   XP_013841950
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,954,292 - 123,988,102 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013986497   ⟹   XP_013841951
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,954,292 - 123,988,096 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013986498   ⟹   XP_013841952
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,954,292 - 123,988,096 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013986500   ⟹   XP_013841954
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,954,292 - 123,988,102 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013986501   ⟹   XP_013841955
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,944,365 - 123,988,096 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013986502   ⟹   XP_013841956
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,954,292 - 123,988,096 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013986504   ⟹   XP_013841958
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,954,292 - 123,988,096 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021079960   ⟹   XP_020935619
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X123,942,981 - 123,988,102 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020935619   ⟸   XM_021079960
- Peptide Label: isoform X8
- UniProtKB: A0A4X1TF62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013841955   ⟸   XM_013986501
- Peptide Label: isoform X6
- UniProtKB: F1S2C9 (UniProtKB/TrEMBL),   A0A8D1SWI4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013841950   ⟸   XM_013986496
- Peptide Label: isoform X2
- UniProtKB: A0A8D1SWI4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013841954   ⟸   XM_013986500
- Peptide Label: isoform X5
- UniProtKB: A0A8D1SWI4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013841951   ⟸   XM_013986497
- Peptide Label: isoform X3
- UniProtKB: A0A8D0LLW8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013841956   ⟸   XM_013986502
- Peptide Label: isoform X7
- UniProtKB: A0A5G2QSQ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013841948   ⟸   XM_013986494
- Peptide Label: isoform X1
- UniProtKB: A0A4X1TFX6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013841952   ⟸   XM_013986498
- Peptide Label: isoform X4
- UniProtKB: A0A8D0LLW8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013841958   ⟸   XM_013986504
- Peptide Label: isoform X9
- UniProtKB: A0A5G2QSQ9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000062150   ⟸   ENSSSCT00000074209
Ensembl Acc Id: ENSSSCP00000061109   ⟸   ENSSSCT00000073551
Ensembl Acc Id: ENSSSCP00000023330   ⟸   ENSSSCT00000027243
Ensembl Acc Id: ENSSSCP00000072644   ⟸   ENSSSCT00000081150
Ensembl Acc Id: ENSSSCP00000071592   ⟸   ENSSSCT00000077387
Ensembl Acc Id: ENSSSCP00000013566   ⟸   ENSSSCT00000013949
Ensembl Acc Id: ENSSSCP00000063521   ⟸   ENSSSCT00000072686
Ensembl Acc Id: ENSSSCP00000061203   ⟸   ENSSSCT00000082489
Ensembl Acc Id: ENSSSCP00000075153   ⟸   ENSSSCT00000094595
Protein Domains
LIM zinc-binding


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012759 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005018708 UniProtKB/TrEMBL
  ENSSSCG00025000016 UniProtKB/TrEMBL
  ENSSSCG00040049468 UniProtKB/TrEMBL
  ENSSSCG00050030720 UniProtKB/TrEMBL
  ENSSSCG00055003953 UniProtKB/TrEMBL
  ENSSSCG00060015955 UniProtKB/TrEMBL
  ENSSSCG00070008595 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013949 ENTREZGENE
  ENSSSCT00000013949.5 UniProtKB/TrEMBL
  ENSSSCT00000027243.4 UniProtKB/TrEMBL
  ENSSSCT00000072686 ENTREZGENE
  ENSSSCT00000072686.2 UniProtKB/TrEMBL
  ENSSSCT00000073551.2 UniProtKB/TrEMBL
  ENSSSCT00000074209 ENTREZGENE
  ENSSSCT00000074209.2 UniProtKB/TrEMBL
  ENSSSCT00000077387.2 UniProtKB/TrEMBL
  ENSSSCT00000081150 ENTREZGENE
  ENSSSCT00000081150.2 UniProtKB/TrEMBL
  ENSSSCT00000082489 ENTREZGENE
  ENSSSCT00000082489.2 UniProtKB/TrEMBL
  ENSSSCT00000094595.1 UniProtKB/TrEMBL
  ENSSSCT00005030083.1 UniProtKB/TrEMBL
  ENSSSCT00025000036.1 UniProtKB/TrEMBL
  ENSSSCT00040068646.1 UniProtKB/TrEMBL
  ENSSSCT00050041360.1 UniProtKB/TrEMBL
  ENSSSCT00055007865.1 UniProtKB/TrEMBL
  ENSSSCT00060021338.1 UniProtKB/TrEMBL
  ENSSSCT00070016828.1 UniProtKB/TrEMBL
  ENSSSCT00070016907.1 UniProtKB/TrEMBL
Gene3D-CATH Cysteine Rich Protein UniProtKB/TrEMBL
InterPro Cell_Prolif/Cornif_Regul UniProtKB/TrEMBL
  Znf_LIM UniProtKB/TrEMBL
NCBI Gene ZNF185 ENTREZGENE
PANTHER PTHR15468:SF2 UniProtKB/TrEMBL
  ZNF185 UniProtKB/TrEMBL
PROSITE LIM_DOMAIN_1 UniProtKB/TrEMBL
  LIM_DOMAIN_2 UniProtKB/TrEMBL
SMART LIM UniProtKB/TrEMBL
UniProt A0A4X1TF62 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1TFX6 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QC61_PIG UniProtKB/TrEMBL
  A0A5G2QHZ9_PIG UniProtKB/TrEMBL
  A0A5G2QJE0_PIG UniProtKB/TrEMBL
  A0A5G2QSQ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2R6D8_PIG UniProtKB/TrEMBL
  A0A5G2RBP1_PIG UniProtKB/TrEMBL
  A0A8D0LLW8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1SWI4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4F795_PIG UniProtKB/TrEMBL
  F1S2C9 ENTREZGENE, UniProtKB/TrEMBL
  I3LGY6_PIG UniProtKB/TrEMBL
VGNC ID VGNC:95201 ENTREZGENE