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Gene: RBM44 (RNA binding motif protein 44) Sus scrofa

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Symbol:

RBM44

Name:

RNA binding motif protein 44

RGD ID:

14069292

Description:

ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH Bethlem Myopathy 1A (ortholog); chromosome 2q37 deletion syndrome (ortholog); D-2-hydroxyglutaric aciduria 1 (ortholog); FOUND IN cytoplasm (ortholog); intercellular bridge (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

RNA-binding protein 44

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	137,444,855 - 137,481,025 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	137,444,905 - 137,482,073 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	151,852,988 - 151,890,497 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bethlem Myopathy 1A (ISO)

chromosome 2q37 deletion syndrome (ISO)

D-2-hydroxyglutaric aciduria 1 (ISO)

hereditary spastic paraplegia 30 (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytoplasm (ISO)

intercellular bridge (ISO)

Molecular Function

protein binding (ISO)

protein homodimerization activity (ISO)

RNA binding (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

RBM44
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	137,444,855 - 137,481,025 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	137,444,905 - 137,482,073 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	151,852,988 - 151,890,497 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RBM44
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	237,798,779 - 237,842,805 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	237,798,389 - 237,842,808 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	238,707,422 - 238,751,448 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	238,372,127 - 238,408,253 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	232,420,425 - 232,464,485 (+)	NCBI		Celera
Cytogenetic Map	2	q37.3	NCBI
HuRef	2	230,499,343 - 230,543,403 (+)	NCBI		HuRef
CHM1_1	2	238,713,179 - 238,757,242 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	238,288,049 - 238,332,805 (+)	NCBI		T2T-CHM13v2.0

Rbm44
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	91,072,695 - 91,098,521 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	91,072,811 - 91,098,517 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	91,144,973 - 91,170,799 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	91,145,089 - 91,170,795 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	93,041,680 - 93,067,372 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	92,975,509 - 93,001,201 (+)	NCBI		MGSCv36	mm8
Celera	1	94,088,163 - 94,108,775 (+)	NCBI		Celera
Cytogenetic Map	1	D	NCBI
cM Map	1	46.08	NCBI

Rbm44
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	99,178,706 - 99,204,344 (+)	NCBI		GRCr8
mRatBN7.2	9	91,731,153 - 91,756,783 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	91,731,115 - 91,756,772 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	9	98,279,031 - 98,305,248 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	98,279,022 - 98,304,859 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	97,961,069 - 97,986,891 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	90,372,335 - 90,393,175 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	89,273,820 - 89,299,842 (+)	NCBI		Celera
Cytogenetic Map	9	q36	NCBI

Rbm44
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955542	2,571,203 - 2,620,313 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955542	2,573,648 - 2,620,240 (-)	NCBI	ChiLan1.0	ChiLan1.0

RBM44
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	140,431,580 - 140,475,590 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	140,446,547 - 140,490,557 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	125,032,071 - 125,075,989 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	243,882,989 - 243,926,875 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

RBM44
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	48,378,913 - 48,420,011 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	48,378,970 - 48,410,104 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	48,875,810 - 48,916,873 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	48,764,889 - 48,805,968 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	48,764,931 - 48,805,602 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	48,640,712 - 48,681,541 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	48,428,987 - 48,470,051 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	48,661,612 - 48,702,183 (+)	NCBI		UU_Cfam_GSD_1.0

Rbm44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	190,354,555 - 190,391,783 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936525	556,513 - 569,589 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936525	556,497 - 585,503 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RBM44
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	123,816,053 - 123,861,117 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	123,831,247 - 123,852,787 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	75,551,952 - 75,574,644 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rbm44
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624847	3,105,564 - 3,158,902 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624847	3,105,568 - 3,158,511 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RBM44
1767 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	4	23	3	2	5	13	12	23	3	5	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021075455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021075456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01029246	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000017785 ⟹ ENSSSCP00000017304

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	15	137,444,855 - 137,481,025 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000054673 ⟹ ENSSSCP00000041090

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	15	137,380,604 - 137,477,715 (+)	Ensembl

RefSeq Acc Id:

XM_021075455 ⟹ XP_020931114

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	15	137,444,905 - 137,482,073 (+)	NCBI

Sequence:

show sequence

CCTCGGAGGTGGTGGCTGCGGCGGGACGCTCCGCGTGTGGCGGCGACGGCGGCAGCAGCAGGGA
GGTTCCGAGGACATACATTGCTGAGAGATGCAGGCCACTGCCGTGGTGAAGACGGCTGCTAGTA
AAGGCTACCGCGCTGATGGAGGAAACGCCCAGAAAGATGAGCCTGCTCGTCCTCAGAGAGGGTA
TTTGTTGCTGTCTCCCAGTGGTAGTAAAGAAGCCCAGCTGACACTTCTCGACGACTGGGACCCC
TTAGCATTAGGCAAAAGCGCCAGTGACAACGAAATCAGCAGTATTGGCAAAACAGATTTATTGG
CGCCGTCTTTAAGTGTGAGTCCGGATACTAACGTCGAGAGGGCTCACTCGAAGTCAAGTGAGTT
TGAAGACAGTACTGACTATGCTGTCTTGAACGAAACATACTCAGTACATTATTCAGAGTCAAAA
CTGCAGAAAAGTCTCATGCCTTTAAATTCAGAATTAGATTCTGAATTGCAAAAAAAGGAGGAGA
TGTTTTTTGATATTCTGGAACATCAAGGAAATAAGGCTTTTGGTTTGGAAAGAATCTGCAAGAA
TTCAGATGATGATTATAACGAAACTACTGAAGAGATGCTAAAGCACGATGCAGATGGAGACTCA
CAACAGGAATATCACAGCGCAGAAGAGCAAGAGTATATAAGTAACCATTTATATTTCGACCAAA
CAGAGACATTAAACATATCTAATCTGGAAGTTTTGGCATTAAGAAACCCAAGCAATCGAGAAGA
AAATCATGTTAAATTGAAAAGTAATTCTGGCATCTCTTTTGATTCGGTTGATACTTATGGACAA
GAAGAGTCACCTCATGTCTCCACATTTGGGAATTCCGTTATGTTAAGAGAGTATCAAGCGCCAG
AGTGTGGAAAGTGTGAGGAGCAGGAGACAAGTGTCATGTACCACACGGCTTTTGACGGGATTGT
CCTAAGGAGTAGTCCTCCTGACCCCCAGGCATCTCCGTCTGAGAGTGGTTTCTTTAACCCTCAG
AAAGCATTAAAAACTAGAATTTATCCTGGCAAGATGAAATCTCAAATAGCTGAAAGTAAAGATT
TTGGTGGAAATTCAGTTGTTGAGAACAGAATGTTACAGCACCTTGAAAATCCAAGCACGTTACC
ACAGGACAGAGACTTAGAGACACGACTCGTGAAGACGCAGCCCCGTAAAGATTGTCAGACTTCC
TGGACCTCTATTTTTGATGATTCAGCAGATTCTGCCTGTGGGCATTCGCATTATAAAAGCCTAC
AAAACACCCCTAACCCAGCTCTAGATTCTTCTGTTAGTCTGCCAAGGTCTGCAAGCAGGGGTAA
CCAGGCAGTAGAGGAAGGTGGCTGTCCAAAGATGGCCAGTGGCAGTGCTGCACACCAGGCGCGC
TTTCACCACGCAGACGCACCACGTCCTGAATCAGTGACAGAGGGGGCACGTGGTTCGGTCACAG
TTAATCAGACAGTGGATGTCAGCACGGACTTCAGGGCTTGTTTCACAACCAGCAGGGCAACCAG
TGCAAGATCTTCTGTAGTATCGACCTCAAGCAACACAGAGGTGACAATGATGAGTAAAAAACGA
CCTGGTGAATGGCAGAGGGAGAGACAGAGAAGCGTGGCTTGTGATGCAGAGGAGTCGTACAGCC
ACGGTGATGCAGATCCCCAGACAGCAGTGGCGAAAGGACCTTTGGGAAAATCTCTCTCAGTGGG
GAGTTTAAAACCTAATGGAAATTTCCTAAATAAGGATTCCTTGGAAGTAAGGAAAGCATTTGAT
ATCACAGACTTAAGCAAACCTTCTGAAAGGGAACCTCAACTTACTACAGAGGCGGAGAAGACTT
TGCCGTCAAAGTGCTGTGAGCAGATAATGCAGAGAGCCGTCCAAGCGGAGTCGCACCTTTTAAA
TGTTCACTATCAGATGTGTCATCAGCATTGCAGTGACATTTACAAACTCCTCATGGATAATAGG
AGTTTATCGAGTAATTCTACTAAGAAGGAATTAGGATCAGCACTGCTGTCAGTTTTGGGAGACT
TGAAAGTTAGGTATGTGAATTTGAAAGAAAAGATCAACAAGGGTGTACCTCTGGAAGAGCTGCC
GCCACTGTCACTGGAGTCAAAATTACTGTCGGCCTTCTCCACCTTTGCTTCCAGGTTAATGAAA
AAAGAATCACATGTCTTTTCAGGAGAAGATTCTGAACGAGATCATCAAAGTACACATGATGTTG
ATGTTTCTTTGAGTCTAAAAACAGCACACTCTCAAGCGTCCGTGTCGTCTGAGGGCGGTTGTCC
TGAACAAGACGCGGCACCCACGGAGGCCGTGCTGCACCGTGCTGATTCCGATGCAGGCCTCAGT
CGGCTGAGACTTGATGGTGAAGACAGCAGAAATTACAGAGAAATAAGTGAAGACTGGTTTGATG
CGAAAGAGAACCTGACCGGAGCTGACTTCACAGGAGAGCAGGAACGTCAGATAGAACAAGACAG
CGGGGACCCGGCGTCTACACAAGAGAGGAAGAGTGTTGCAGCCTTACCAAGAGACGAAGGCTAC
TTGGTACATGTTGGTGGTCTCTGCCCCTCCTTGTCTGAGGCTGACCTAAGGTCTCATTTCCAGA
AATACGAAATTTCTGACATTTCAATTTACGATTCTTCTCCTAATTACAGATATGCATCTCTTGC
TTTAAAAAAAAATGATGATGCAAAGATGGCTGTGAAAGAAATGAATGATATAGAAATAAATGGA
AAATCAGTGAATGTTTGGCTTGTCAAAACTCCTGCGGAATGCACAGCACCACTTTCCTCCAAAA
ATGGAAATAAAGTTAGTTTCAATAATCTGGAGAAAAGCATCAGCAAAGAAATCAACTCAGCCTC
CTCTCTTTCCAGACTGCCCAGAACTAGGCCAAGGCATCTGGGATCTGAGCAAGACAGTGAGTTT
TTCCCTTTTGACCAAAAGGGTGTCAAGAAGAATTGTAAACAGATTGAATCTGCTAAATTATTAC
CTGATACACCTATTCAATTCCTACCTCCAAATACATTGAACCTGCGTAGCCTTACCAAGATCAT
GAAGAGACTGACTGAACTATATCCAGAAGTTAGCAGAGACCGTATTATAGACGCTCTGCAGGAA
GTAAGACTAAATCATCGCGGTTTCCTGCACGGCTTATCTATTAGTACTATTGTGGAAATGACTT
CTTCTGTTTTGGAAAACTCTGCTTCCAAAAGCAGTAAGAGGGAAATGCGGTCGAAACCTCAGTG
AGGTAAGACCTCACAGCCATGAGGACGGCAGTCACCCCACTGGCAACAGAAGAGTGTTGAGGAG
GGTGTGGAACAACTGGAAGCTGCGCTGCGCTGCGCTGCCGGGGACATGAAATAGTGCAGCCGCT
GTGGAGACGGTGTGGCAGTTCCTCGGATCTTTAAACTAGAAGTATCATGTGGCCGACAAGTCCC
CTTCTGAGTGCTTACCGAGTTGAGTGATATGCTTGGCCAAGGGGTAGGATTTAATGGTAAATAT
ATATACTTCTCCTATCGTACCACACTCACGTGATAAGTGAATTTAAGGACAATGCTTGGTTTAG
TGGTCAGTGCACTGATAACTACATTTTTCTGGAATTTTGGATTTAGCCTCATCAGCACATTTTA
TTGTTGATTCCTTCTTTTCTTGACCCGTAGAATTTCCTTGGAAAGCTGAGTTCCGTCCTACAAA
GAATGTTCTACGGCACTTAGGAAAAAGTTGTAATAGGAAGATGGCGGGATTAAATAAGTTTGAT
AAATGGATTTAGCTGTTTATAATAATCTGCTTGGTATAGCCCTCTCTTTATACCTAGCAACTGT
TGTTTCTACAATATAATGATTTTCTCTGTATAAAGTAAAAGGATAAAATTTAATACTTATCATC
CTTATATTTCAAACTTGTCACTTAGAGACTTGAAGCTGCATATTTTGGACCAGAAACAAAGATG
AGGTCCATTTTTAAAATCTGTGCTAAATCAGTTTTTAAAATATTGACCAAGAAAAGGTTTATTA
TTATTTCAGTTTTTAAAGTGATTTCCATCCATGAAAACTATAATGTACCTGAAGTCCTTAGTTC
TGGTTTTCAGCTGTCTTAAGGCTCTTACATTGCACGGTAGGATTAATAGATAAACTGAATCCTC
GTTACACATTTTGGAATACGTGTTTTTTAAGCTTTCAAGGTAATGAAATTAGTGTTGTGATACA
TTTAGACGTATTTTCCCAGTTTTCACTAGGAAGAAGGAACCCCTTCCAGTGCTTTGGTAAAGTA
CTTACATGTAAGTGGTCACCCGACTGAGTGTGTGCCTGTTGTGATAAGTTCCGTTAGGTTAGGT
TAGAGTGTAAGTTGGAACTCTTTTCAAAACCTACCTCTGTGCTTTATCTGATAACATAAATTTC
TACAATTGCTTTCCTTTAGCGTACTGTTTAAAGCTGGAGTTTTACTGCTAATAAGATGAACATT
TAATTGTGCATTTTCTTCTTCAGATGTTTAGAGCACTCGATGTTTAGTTGGTATTGTTTTATTA
AAAGTTACCCACTTCA

hide sequence

RefSeq Acc Id:

XM_021075456 ⟹ XP_020931115

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	15	137,444,905 - 137,482,073 (+)	NCBI

Sequence:

show sequence

CCTCGGAGGTGGTGGCTGCGGCGGGACGCTCCGCGTGTGGCGGCGACGGCGGCAGCAGCAGGGA
GGTTCCGAGGACATACATTGCTGAGAGATGCAGGCCACTGCCGTGGTGAAGACGGCTGCTAGTA
AAGGCTACCGCGCTGATGGAGGAAACGCCCAGAAAGATGAGCCTGCTCGTCCTCAGAGAGGGTA
TTTGTTGCTGTCTCCCAGTGGTAGTAAAGAAGCCCAGCTGACACTTCTCGACGACTGGGACCCC
TTAGCATTAGGCAAAAGCGCCAGTGACAACGAAATCAGCAGTATTGGCAAAACAGATTTATTGG
CGCCGTCTTTAAGTGTGAGTCCGGATACTAACGTCGAGAGGGCTCACTCGAAGTCAAGTGAGTT
TGAAGACAGTACTGACTATGCTGTCTTGAACGAAACATACTCAGTACATTATTCAGAGTCAAAA
CTGCAGAAAAGTCTCATGCCTTTAAATTCAGAATTAGATTCTGAATTGCAAAAAAAGGAGGAGA
TGTTTTTTGATATTCTGGAACATCAAGGAAATAAGGCTTTTGGTTTGGAAAGAATCTGCAAGAA
TTCAGATGATGATTATAACGAAACTACTGAAGAGATGCTAAAGCACGATGCAGATGGAGACTCA
CAACAGGAATATCACAGCGCAGAAGAGCAAGAGTATATAAGTAACCATTTATATTTCGACCAAA
CAGAGACATTAAACATATCTAATCTGGAAGTTTTGGCATTAAGAAACCCAAGCAATCGAGAAGA
AAATCATGTTAAATTGAAAAGTAATTCTGGCATCTCTTTTGATTCGGTTGATACTTATGGACAA
GAAGAGTCACCTCATGTCTCCACATTTGGGAATTCCGTTATGTTAAGAGAGTATCAAGCGCCAG
AGTGTGGAAAGTGTGAGGAGCAGGAGACAAGTGTCATGTACCACACGGCTTTTGACGGGATTGT
CCTAAGGAGTAGTCCTCCTGACCCCCAGGCATCTCCGTCTGAGAGTGGTTTCTTTAACCCTCAG
AAAGCATTAAAAACTAGAATTTATCCTGGCAAGATGAAATCTCAAATAGCTGAAAGTAAAGATT
TTGGTGGAAATTCAGTTGTTGAGAACAGAATGTTACAGCACCTTGAAAATCCAAGCACGTTACC
ACAGGACAGAGACTTAGAGACACGACTCGTGAAGACGCAGCCCCGTAAAGATTGTCAGACTTCC
TGGACCTCTATTTTTGATGATTCAGCAGATTCTGCCTGTGGGCATTCGCATTATAAAAGCCTAC
AAAACACCCCTAACCCAGCTCTAGATTCTTCTGTTAGTCTGCCAAGGTCTGCAAGCAGGGGTAA
CCAGGCAGTAGAGGAAGGTGGCTGTCCAAAGATGGCCAGTGGCAGTGCTGCACACCAGGCGCGC
TTTCACCACGCAGACGCACCACGTCCTGAATCAGTGACAGAGGGGGCACGTGGTTCGGTCACAG
TTAATCAGACAGTGGATGTCAGCACGGACTTCAGGGCTTGTTTCACAACCAGCAGGGCAACCAG
TGCAAGATCTTCTGTAGTATCGACCTCAAGCAACACAGAGGTGACAATGATGAGTAAAAAACGA
CCTGGTGAATGGCAGAGGGAGAGACAGAGAAGCGTGGCTTGTGATGCAGAGGAGTCGTACAGCC
ACGGTGATGCAGATCCCCAGACAGCAGTGGCGAAAGGACCTTTGGGAAAATCTCTCTCAGTGGG
GAGTTTAAAACCTAATGGAAATTTCCTAAATAAGGATTCCTTGGAAGTAAGGAAAGCATTTGAT
ATCACAGACTTAAGCAAACCTTCTGAAAGGGAACCTCAACTTACTACAGAGGCGGAGAAGACTT
TGCCGTCAAAGTGCTGTGAGCAGATAATGCAGAGAGCCGTCCAAGCGGAGTCGCACCTTTTAAA
TGTTCACTATCAGATGTGTCATCAGCATTGCAGTGACATTTACAAACTCCTCATGGATAATAGG
AGTTTATCGAGTAATTCTACTAAGAAGGAATTAGGATCAGCACTGCTGTCAGTTTTGGGAGACT
TGAAAGTTAGGTATGTGAATTTGAAAGAAAAGATCAACAAGGGTGTACCTCTGGAAGAGCTGCC
GCCACTGTCACTGGAGTCAAAATTACTGTCGGCCTTCTCCACCTTTGCTTCCAGGTTAATGAAA
AAAGAATCACATGTCTTTTCAGGAGAAGATTCTGAACGAGATCATCAAAGTACACATGATGTTG
ATGTTTCTTTGAGTCTAAAAACAGCACACTCTCAAGCGTCCGTGTCGTCTGAGGGCGGTTGTCC
TGAACAAGACGCGGCACCCACGGAGGCCGTGCTGCACCGTGCTGATTCCGATGCAGGCCTCAGT
CGGCTGAGACTTGATGGTGAAGACAGCAGAAATTACAGAGAAATAAGTGAAGACTGGTTTGATG
CGAAAGAGAACCTGACCGGAGCTGACTTCACAGGAGAGCAGGAACGTCAGATAGAACAAGACAG
CGGGGACCCGGCGTCTACACAAGAGAGGAAGAGTGTTGCAGCCTTACCAAGAGACGAAGGCTAC
TTGGTACATGTTGGTGGTCTCTGCCCCTCCTTGTCTGAGGCTGACCTAAGGTCTCATTTCCAGA
AATACGAAATTTCTGACATTTCAATTTACGATTCTTCTCCTAATTACAGATATGCATCTCTTGC
TTTAAAAAAAAATGATGATGCAAAGATGGCTGTGAAAGAAATGAATGATATAGAAATAAATGGA
AAATCAGTGAATGTTTGGCTTGTCAAAACTCCTGCGGAATGCACAGCACCACTTTCCTCCAAAA
ATGGAAATAAAGTTAGTTTCAATAATCTGGAGAAAAGCATCAGCAAAGAAATCAACTCAGCCTC
CTCTCTTTCCAGACTGCCCAGAACTAGGCCAAGGCATCTGGGATCTGAGCAAGACAGTGAGTTT
TTCCCTTTTGACCAAAAGGGTGTCAAGAAGAATTGTAAACAGATTGAATCTGCTAAATTATTAC
CTGATACACCTATTCAATTCCTACCTCCAAATACATTGAACCTGCGTAGCCTTACCAAGATCAT
GAAGAGACTGACTGAACTATATCCAGAAGTTAGCAGAGACCGTATTATAGACGCTCTGCAGGAA
GTAAGACTAAATCATCGCGGTTTCCTGCACGGCTTATCTATTAGTACTATTGTGGAAATGACTT
CTTCTGTTTTGGAAAACTCTGCTTCCAAAAGCAGTAAGAGAATTTCCTTGGAAAGCTGAGTTCC
GTCCTACAAAGAATGTTCTACGGCACTTAGGAAAAAGTTGTAATAGGAAGATGGCGGGATTAAA
TAAGTTTGATAAATGGATTTAGCTGTTTATAATAATCTGCTTGGTATAGCCCTCTCTTTATACC
TAGCAACTGTTGTTTCTACAATATAATGATTTTCTCTGTATAAAGTAAAAGGATAAAATTTAAT
ACTTATCATCCTTATATTTCAAACTTGTCACTTAGAGACTTGAAGCTGCATATTTTGGACCAGA
AACAAAGATGAGGTCCATTTTTAAAATCTGTGCTAAATCAGTTTTTAAAATATTGACCAAGAAA
AGGTTTATTATTATTTCAGTTTTTAAAGTGATTTCCATCCATGAAAACTATAATGTACCTGAAG
TCCTTAGTTCTGGTTTTCAGCTGTCTTAAGGCTCTTACATTGCACGGTAGGATTAATAGATAAA
CTGAATCCTCGTTACACATTTTGGAATACGTGTTTTTTAAGCTTTCAAGGTAATGAAATTAGTG
TTGTGATACATTTAGACGTATTTTCCCAGTTTTCACTAGGAAGAAGGAACCCCTTCCAGTGCTT
TGGTAAAGTACTTACATGTAAGTGGTCACCCGACTGAGTGTGTGCCTGTTGTGATAAGTTCCGT
TAGGTTAGGTTAGAGTGTAAGTTGGAACTCTTTTCAAAACCTACCTCTGTGCTTTATCTGATAA
CATAAATTTCTACAATTGCTTTCCTTTAGCGTACTGTTTAAAGCTGGAGTTTTACTGCTAATAA
GATGAACATTTAATTGTGCATTTTCTTCTTCAGATGTTTAGAGCACTCGATGTTTAGTTGGTAT
TGTTTTATTAAAAGTTACCCACTTCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020931114	(Get FASTA)	NCBI Sequence Viewer
	XP_020931115	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000017304
	ENSSSCP00000017304.5
	ENSSSCP00025047124.1
	ENSSSCP00035013018.1

RefSeq Acc Id:	XP_020931114 ⟸ XM_021075455
- Peptide Label:	isoform X1
- UniProtKB:	F1SJI3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQATAVVKTAASKGYRADGGNAQKDEPARPQRGYLLLSPSGSKEAQLTLLDDWDPLALGKSASD NEISSIGKTDLLAPSLSVSPDTNVERAHSKSSEFEDSTDYAVLNETYSVHYSESKLQKSLMPLN SELDSELQKKEEMFFDILEHQGNKAFGLERICKNSDDDYNETTEEMLKHDADGDSQQEYHSAEE QEYISNHLYFDQTETLNISNLEVLALRNPSNREENHVKLKSNSGISFDSVDTYGQEESPHVSTF GNSVMLREYQAPECGKCEEQETSVMYHTAFDGIVLRSSPPDPQASPSESGFFNPQKALKTRIYP GKMKSQIAESKDFGGNSVVENRMLQHLENPSTLPQDRDLETRLVKTQPRKDCQTSWTSIFDDSA DSACGHSHYKSLQNTPNPALDSSVSLPRSASRGNQAVEEGGCPKMASGSAAHQARFHHADAPRP ESVTEGARGSVTVNQTVDVSTDFRACFTTSRATSARSSVVSTSSNTEVTMMSKKRPGEWQRERQ RSVACDAEESYSHGDADPQTAVAKGPLGKSLSVGSLKPNGNFLNKDSLEVRKAFDITDLSKPSE REPQLTTEAEKTLPSKCCEQIMQRAVQAESHLLNVHYQMCHQHCSDIYKLLMDNRSLSSNSTKK ELGSALLSVLGDLKVRYVNLKEKINKGVPLEELPPLSLESKLLSAFSTFASRLMKKESHVFSGE DSERDHQSTHDVDVSLSLKTAHSQASVSSEGGCPEQDAAPTEAVLHRADSDAGLSRLRLDGEDS RNYREISEDWFDAKENLTGADFTGEQERQIEQDSGDPASTQERKSVAALPRDEGYLVHVGGLCP SLSEADLRSHFQKYEISDISIYDSSPNYRYASLALKKNDDAKMAVKEMNDIEINGKSVNVWLVK TPAECTAPLSSKNGNKVSFNNLEKSISKEINSASSLSRLPRTRPRHLGSEQDSEFFPFDQKGVK KNCKQIESAKLLPDTPIQFLPPNTLNLRSLTKIMKRLTELYPEVSRDRIIDALQEVRLNHRGFL HGLSISTIVEMTSSVLENSASKSSKREMRSKPQ hide sequence

RefSeq Acc Id:	XP_020931115 ⟸ XM_021075456
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D0ZCQ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQATAVVKTAASKGYRADGGNAQKDEPARPQRGYLLLSPSGSKEAQLTLLDDWDPLALGKSASD NEISSIGKTDLLAPSLSVSPDTNVERAHSKSSEFEDSTDYAVLNETYSVHYSESKLQKSLMPLN SELDSELQKKEEMFFDILEHQGNKAFGLERICKNSDDDYNETTEEMLKHDADGDSQQEYHSAEE QEYISNHLYFDQTETLNISNLEVLALRNPSNREENHVKLKSNSGISFDSVDTYGQEESPHVSTF GNSVMLREYQAPECGKCEEQETSVMYHTAFDGIVLRSSPPDPQASPSESGFFNPQKALKTRIYP GKMKSQIAESKDFGGNSVVENRMLQHLENPSTLPQDRDLETRLVKTQPRKDCQTSWTSIFDDSA DSACGHSHYKSLQNTPNPALDSSVSLPRSASRGNQAVEEGGCPKMASGSAAHQARFHHADAPRP ESVTEGARGSVTVNQTVDVSTDFRACFTTSRATSARSSVVSTSSNTEVTMMSKKRPGEWQRERQ RSVACDAEESYSHGDADPQTAVAKGPLGKSLSVGSLKPNGNFLNKDSLEVRKAFDITDLSKPSE REPQLTTEAEKTLPSKCCEQIMQRAVQAESHLLNVHYQMCHQHCSDIYKLLMDNRSLSSNSTKK ELGSALLSVLGDLKVRYVNLKEKINKGVPLEELPPLSLESKLLSAFSTFASRLMKKESHVFSGE DSERDHQSTHDVDVSLSLKTAHSQASVSSEGGCPEQDAAPTEAVLHRADSDAGLSRLRLDGEDS RNYREISEDWFDAKENLTGADFTGEQERQIEQDSGDPASTQERKSVAALPRDEGYLVHVGGLCP SLSEADLRSHFQKYEISDISIYDSSPNYRYASLALKKNDDAKMAVKEMNDIEINGKSVNVWLVK TPAECTAPLSSKNGNKVSFNNLEKSISKEINSASSLSRLPRTRPRHLGSEQDSEFFPFDQKGVK KNCKQIESAKLLPDTPIQFLPPNTLNLRSLTKIMKRLTELYPEVSRDRIIDALQEVRLNHRGFL HGLSISTIVEMTSSVLENSASKSSKRISLES hide sequence

Ensembl Acc Id:

ENSSSCP00000041090 ⟸ ENSSSCT00000054673

Ensembl Acc Id:

ENSSSCP00000017304 ⟸ ENSSSCT00000017785

Protein Domains

RRM

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000016332	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025076130	UniProtKB/TrEMBL
	ENSSSCG00035025078	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000017785	ENTREZGENE
	ENSSSCT00000017785.5	UniProtKB/TrEMBL
	ENSSSCT00025105443.1	UniProtKB/TrEMBL
	ENSSSCT00035033018.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
NCBI Gene	RBM44	ENTREZGENE
PANTHER	HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN	UniProtKB/TrEMBL
	RNA-BINDING PROTEIN 44	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8D0ZCQ5	ENTREZGENE, UniProtKB/TrEMBL
	F1SJI3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar