LOC100155572 (40S ribosomal protein S3a pseudogene) - Rat Genome Database

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Gene: LOC100155572 (40S ribosomal protein S3a pseudogene) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC100155572
Name: 40S ribosomal protein S3a pseudogene
RGD ID: 14051745
Description:
Type: pseudo
RefSeq Status: MODEL
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1776,362,969 - 76,363,844 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2781,602,224 - 81,603,104 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC100155572
63 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system endocrine system hemolymphoid system musculoskeletal system nervous system
High
Medium
Low 1
Below cutoff 1 1 2 2

Sequence

Nucleotide Sequences
RefSeq Transcripts XR_304540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XR_304540
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1776,362,969 - 76,363,844 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000002045 ENTREZGENE
Ensembl Transcript ENSSSCT00000002288 ENTREZGENE
NCBI Gene LOC100155572 ENTREZGENE