LOC110257903 (granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like) - Rat Genome Database

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Gene: LOC110257903 (granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC110257903
Name: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like
RGD ID: 14029579
Description: ENCODES a protein that exhibits cytokine receptor activity (inferred); INVOLVED IN cytokine-mediated signaling pathway (inferred); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1Y5,019,990 - 5,035,462 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC110257903
8 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
8 3 7 2 5 8 9 7 1 3

Sequence


RefSeq Acc Id: XM_021080905   ⟹   XP_020936564
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1Y5,019,991 - 5,035,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021080906   ⟹   XP_020936565
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1Y5,019,990 - 5,035,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021080907   ⟹   XP_020936566
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1Y5,020,006 - 5,035,457 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021080908   ⟹   XP_020936567
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1Y5,019,992 - 5,035,461 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021080910   ⟹   XP_020936569
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1Y5,020,004 - 5,035,458 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020936565   ⟸   XM_021080906
- Peptide Label: isoform X2
- UniProtKB: A0A8D0PK93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936564   ⟸   XM_021080905
- Peptide Label: isoform X1
- UniProtKB: A0A8D0PK93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936567   ⟸   XM_021080908
- Peptide Label: isoform X4
- UniProtKB: A0A8D0PK93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936569   ⟸   XM_021080910
- Peptide Label: isoform X5
- UniProtKB: A0A8D0PK93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936566   ⟸   XM_021080907
- Peptide Label: isoform X3
- UniProtKB: A0A8D0PK93 (UniProtKB/TrEMBL)
- Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000032135 UniProtKB/TrEMBL
  ENSSSCG00015064570 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000054823.3 UniProtKB/TrEMBL
  ENSSSCT00000105743.1 UniProtKB/TrEMBL
  ENSSSCT00000106884.1 UniProtKB/TrEMBL
  ENSSSCT00015086439.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  IL3Ra_N UniProtKB/TrEMBL
  Short_hematopoietin_rcpt_2_CS UniProtKB/TrEMBL
  Type-I_Cytokine_Rcpt UniProtKB/TrEMBL
  TypeI_recpt_CBD UniProtKB/TrEMBL
NCBI Gene LOC110257903 ENTREZGENE
PANTHER CYTOKINE RECEPTOR UniProtKB/TrEMBL
  GRANULOCYTE-MACROPHAGE COLONY-STIMULATING FACTOR RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
Pfam IL3Ra_N UniProtKB/TrEMBL
  IL6Ra-bind UniProtKB/TrEMBL
PROSITE FN3 UniProtKB/TrEMBL
  HEMATOPO_REC_S_F2 UniProtKB/TrEMBL
Superfamily-SCOP SSF49265 UniProtKB/TrEMBL
UniProt A0A286ZMG1_PIG UniProtKB/TrEMBL
  A0A8D0PK93 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FA70_PIG UniProtKB/TrEMBL
  A0A8W4FK06_PIG UniProtKB/TrEMBL