HDLBP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 15 | 139,957,715 - 140,022,302 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 139,957,703 - 140,025,336 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 155,072,247 - 155,103,227 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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HDLBP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 241,227,291 - 241,315,672 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 241,227,264 - 241,317,061 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 242,166,706 - 242,255,087 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 241,815,352 - 241,903,927 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 241,888,133 - 241,932,241 | NCBI | | | | | Celera | 2 | 235,835,975 - 235,924,726 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q37.3 | NCBI | | | | | HuRef | 2 | 233,922,808 - 234,011,018 (-) | NCBI | | HuRef | | | CHM1_1 | 2 | 242,172,732 - 242,261,199 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 241,726,284 - 241,814,658 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Hdlbp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 93,333,662 - 93,406,639 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 93,333,662 - 93,406,537 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 93,405,940 - 93,478,917 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 93,405,940 - 93,478,815 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 95,302,517 - 95,375,385 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 95,236,346 - 95,309,214 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 96,350,440 - 96,424,455 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | D | NCBI | | | | | cM Map | 1 | 47.24 | NCBI | | | | |
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Hdlbp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 9 | 101,395,491 - 101,465,446 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 93,948,099 - 94,018,040 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 9 | 93,949,913 - 94,018,048 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 9 | 102,385,425 - 102,453,504 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 9 | 107,521,516 - 107,589,339 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 9 | 105,877,661 - 105,945,485 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 9 | 100,554,574 - 100,624,707 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 9 | 100,554,563 - 100,624,638 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 100,207,602 - 100,277,717 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 92,687,612 - 92,755,853 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 9 | 92,892,384 - 92,960,622 (-) | NCBI | | | | | Celera | 9 | 91,484,527 - 91,552,602 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q36 | NCBI | | | | |
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Hdlbp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955542 | 444,258 - 510,065 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955542 | 444,221 - 505,512 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HDLBP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 13 | 143,931,944 - 144,018,856 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 143,944,949 - 144,033,758 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 128,498,647 - 128,587,305 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 247,293,154 - 247,381,509 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2B | 247,293,154 - 247,335,318 (-) | Ensembl | panpan1.1 | | panPan2 | |
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HDLBP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 25 | 51,228,194 - 51,296,743 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 25 | 51,228,371 - 51,297,942 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 25 | 51,440,859 - 51,509,402 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 25 | 51,422,608 - 51,491,172 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 25 | 51,421,531 - 51,491,227 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 25 | 51,270,273 - 51,338,805 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 25 | 51,009,812 - 51,078,720 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 25 | 51,286,338 - 51,354,867 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Hdlbp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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HDLBP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 10 | 127,289,390 - 127,378,895 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 10 | 127,288,331 - 127,378,986 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 72,000,419 - 72,092,269 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Hdlbp (Heterocephalus glaber - naked mole-rat) |
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