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Gene: ASB11 (ankyrin repeat and SOCS box containing 11) Sus scrofa

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Symbol:

ASB11

Name:

ankyrin repeat and SOCS box containing 11

RGD ID:

13949716

Description:

ENCODES a protein that exhibits glycosyltransferase activity (inferred); phosphatidylinositol N-acetylglucosaminyltransferase activity (inferred); transferase activity (inferred); INVOLVED IN endoplasmic reticulum unfolded protein response (inferred); GPI anchor biosynthetic process (inferred); intracellular signal transduction (inferred); ASSOCIATED WITH autistic disorder (ortholog); Fanconi anemia (ortholog); multiple congenital anomalies-hypotonia-seizures syndrome 2 (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (inferred); endoplasmic reticulum (inferred); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (inferred)

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ankyrin repeat and SOCS box protein 11

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	11,842,855 - 11,868,793 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	11,842,855 - 11,871,040 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	12,803,421 - 12,829,328 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ASB11	Pig	autistic disorder		ISO	ASB11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 and PMID:30208311
ASB11	Pig	Fanconi anemia		ISO	ASB11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Fanconi anemia	ClinVar	PMID:28492532
ASB11	Pig	multiple congenital anomalies-hypotonia-seizures syndrome 2		ISO	ASB11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Multiple congenital anomalies-hypotonia-seizures syndrome 2	ClinVar	PMID:24706016 more ...
ASB11	Pig	Neurodevelopmental Disorders		ISO	ASB11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
ASB11	Pig	syndromic X-linked intellectual disability Lubs type		ISO	ASB11 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs type	ClinVar	PMID:25741868

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ASB11	Pig	endoplasmic reticulum unfolded protein response	involved_in	IEA	UniProtKB:Q8WXH4 and ensembl:ENSP00000417914	150520179		Ensembl	GO_REF:0000107
ASB11	Pig	GPI anchor biosynthetic process	involved_in	IEA	UniPathway:UPA00196	150520179		UniProt	GO_REF:0000041
ASB11	Pig	GPI anchor biosynthetic process	involved_in	IEA	UniProtKB-KW:KW-0337	150520179		UniProt	GO_REF:0000043
ASB11	Pig	GPI anchor biosynthetic process	involved_in	IEA	InterPro:IPR013234 and InterPro:IPR039507	150520179		InterPro	GO_REF:0000002
ASB11	Pig	intracellular signal transduction	involved_in	IEA	InterPro:IPR036036	150520179		InterPro	GO_REF:0000002
ASB11	Pig	positive regulation of protein catabolic process	involved_in	IBA	PANTHER:PTN000651312 and UniProtKB:Q96DX5	150520179		GO_Central	GO_REF:0000033
ASB11	Pig	proteasome-mediated ubiquitin-dependent protein catabolic process	involved_in	IEA	UniProtKB:Q8WXH4 and ensembl:ENSP00000417914	150520179		Ensembl	GO_REF:0000107
ASB11	Pig	protein K11-linked ubiquitination	involved_in	IEA	UniProtKB:Q8WXH4 and ensembl:ENSP00000417914	150520179		Ensembl	GO_REF:0000107
ASB11	Pig	protein ubiquitination	involved_in	IEA	UniProtKB:Q8WXH4 and ensembl:ENSP00000417914	150520179		Ensembl	GO_REF:0000107
ASB11	Pig	protein ubiquitination	involved_in	IBA	PANTHER:PTN000651312 more ...	150520179		GO_Central	GO_REF:0000033
ASB11	Pig	protein ubiquitination	involved_in	IEA	UniPathway:UPA00143	150520179		UniProt	GO_REF:0000041

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ASB11	Pig	Cul5-RING ubiquitin ligase complex	part_of	IEA	UniProtKB:Q8WXH4 and ensembl:ENSP00000417914	150520179		Ensembl	GO_REF:0000107
ASB11	Pig	endoplasmic reticulum	located_in	IEA	UniProtKB:Q8WXH4 and ensembl:ENSP00000417914	150520179		Ensembl	GO_REF:0000107
ASB11	Pig	endoplasmic reticulum	located_in	IEA	UniProtKB-KW:KW-0256	150520179		UniProt	GO_REF:0000043
ASB11	Pig	endoplasmic reticulum	located_in	IEA	UniProtKB-SubCell:SL-0095	150520179		UniProt	GO_REF:0000044
ASB11	Pig	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex	part_of	IEA	InterPro:IPR039507	150520179		InterPro	GO_REF:0000002
ASB11	Pig	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ASB11	Pig	glycosyltransferase activity	enables	IEA	InterPro:IPR001296	150520179		InterPro	GO_REF:0000002
ASB11	Pig	glycosyltransferase activity	enables	IEA	UniProtKB-KW:KW-0328	150520179		UniProt	GO_REF:0000043
ASB11	Pig	phosphatidylinositol N-acetylglucosaminyltransferase activity	enables	IEA	InterPro:IPR039507	150520179		InterPro	GO_REF:0000002
ASB11	Pig	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	150520179		UniProt	GO_REF:0000043
ASB11	Pig	ubiquitin-like ligase-substrate adaptor activity	enables	IEA	UniProtKB:Q8WXH4 and ensembl:ENSP00000417914	150520179		Ensembl	GO_REF:0000107

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

ASB11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	11,842,855 - 11,868,793 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	11,842,855 - 11,871,040 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	12,803,421 - 12,829,328 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ASB11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	15,281,697 - 15,315,640 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	15,281,697 - 15,315,640 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	15,299,819 - 15,333,762 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	15,211,548 - 15,243,648 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	15,061,283 - 15,093,384	NCBI
Celera	X	19,417,215 - 19,449,322 (-)	NCBI		Celera
Cytogenetic Map	X	p22.2	NCBI
HuRef	X	13,058,321 - 13,092,558 (-)	NCBI		HuRef
CHM1_1	X	15,330,773 - 15,364,700 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	14,864,580 - 14,898,525 (-)	NCBI		T2T-CHM13v2.0

Asb11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	163,219,976 - 163,242,166 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	163,219,990 - 163,242,166 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	164,436,953 - 164,459,170 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	164,436,994 - 164,459,170 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	160,876,033 - 160,897,032 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	159,782,206 - 159,803,205 (+)	NCBI		MGSCv36	mm8
Celera	X	147,653,204 - 147,674,239 (+)	NCBI		Celera
Cytogenetic Map	X	F5	NCBI
cM Map	X	76.53	NCBI

Asb11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	33,646,389 - 33,669,790 (-)	NCBI		GRCr8
mRatBN7.2	X	30,014,485 - 30,037,808 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	29,992,416 - 30,037,807 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	31,054,103 - 31,076,005 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	34,484,645 - 34,506,507 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	30,678,440 - 30,700,338 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	31,758,294 - 31,781,863 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	31,700,633 - 31,780,425 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	32,131,988 - 32,155,334 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	50,771,241 - 50,793,101 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	30,361,465 - 30,383,325 (-)	NCBI		Celera
Cytogenetic Map	X	q14	NCBI

Asb11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955519	2,875,212 - 2,896,191 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955519	2,875,287 - 2,896,122 (+)	NCBI	ChiLan1.0	ChiLan1.0

ASB11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	17,082,815 - 17,114,905 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	17,086,482 - 17,118,572 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	7,909,843 - 7,942,277 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	15,192,234 - 15,225,022 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	15,192,234 - 15,225,022 (-)	Ensembl	panpan1.1		panPan2

ASB11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	11,542,466 - 11,567,633 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	11,542,466 - 11,582,983 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	11,449,703 - 11,474,846 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	11,504,544 - 11,529,691 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	11,476,043 - 11,545,061 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	11,567,464 - 11,592,602 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	11,558,808 - 11,583,955 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	11,586,899 - 11,612,032 (-)	NCBI		UU_Cfam_GSD_1.0

Asb11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	4,692,233 - 4,728,528 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	4,701,681 - 4,728,555 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	4,701,670 - 4,728,527 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ASB11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	13,752,138 - 13,784,368 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	13,749,385 - 13,783,846 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666056	15,589,300 - 15,620,474 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Asb11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624829	103,969 - 123,033 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624829	104,065 - 122,955 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in ASB11
649 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
4	2	5	1	10	7	5	3	2	1


RefSeq Transcripts	NM_001243488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001243489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021079396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021079397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU463953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN124187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DY428186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FS683329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01064865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000013272 ⟹ ENSSSCP00000012916

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	X	11,842,865 - 11,868,793 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000032369 ⟹ ENSSSCP00000023628

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	X	11,842,855 - 11,867,717 (-)	Ensembl

RefSeq Acc Id:

NM_001243488 ⟹ NP_001230417

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	11,842,855 - 11,868,760 (-)	NCBI

Sequence:

show sequence

AACCTATACAGAGTGGAAGCCAAAATGGAAGACGCTCCTGTTGCCTATGGCTTTCCAAACATTTTTATTACGATGTTTGCTACTTTTTTCTTCTTCAAGCTTTTGATTAAAGTTTTCCTGGCGCTCCT
AACCCATTTCTATATCGTCAAAGGAAATAGAAAAGAAGCGGCTAGGATAGCAGAAGAGATCTATGGTGAAATTTCAGACTGCTGGGCCGATCGCTCTCCACTTCATGAGGCTGCGGCTCAGGGGCGCC
TGCTGGCCCTTAAAACCTTAATTGCACAAGGTGTCAACGTGAACCTGGTAACCATTAACCGCGTGTCTTCTCTGCATGAGGCGTGCCTCGGCGGCCACGTGGCCTGCGCGAAGGCCCTATTGGAGAAC
GGCGCACACGTCAATGGGGTGACAGTTCACGGAGCCACGCCCCTCTTCAATGCGTGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAATTTGGAGCCAAGGCCCAGCTCGAGGTGCACCT
GGCCTCGCCCATCCACGAGGCAGTGAAGAGAGGCAATAGAGAGTGCATGGAGATTCTGCTGGCAAATAACGTTAACATCGACCAAGAAGTGCCTCACCTCGGAACTCCTCTGTATGTGGCTTGCACCT
ACCAGAGAGTCGACTGTGTCAAGAAACTTCTAGAATTAGGAGCCAACGTTGACCATGGCCAATGGCTGGACAGTCCCCTGCATGCAGCTGCAAGGCAGAACAGTGTGGAAATCATTCACCTGCTGATA
GACTTCGGGGCTAACATCAAGGGCAAAAACGCTCAGGGCAAGATTGCACTTGATCTGGCAGCTCCAAAAAGCAGCGTGGAGCAGGCGCTCTTGCTCCGGGAAGGCCCACCCGCTCTTTCCCAGCTCTG
CCGCCTGTGTGTCCGGAAGTGCTTGGGTCGGACCTGTCATCAGACCATCCAGAAACTCTATCTGCCGGAGCCACTGGAAAGATTCCTCCTCTACCAGTAGTCCAACCTGGCCATGGGAAGATGCTTGG
AAAGAAGCAGGCCATTGCCTGCTGCACCCCGGGTACCTAGTGTAGACGCCCAACAGTTAGATTCCCAGTATCTTCCGACAAGCTAAGCTAGTTATGGCGAATCCTGACAAGCTAAGCAAGTTAGGGCG
AATCCCTGATGCCCCGCAACACTTGGGGAGTGGAAACTCCTGGTTACTTTGGTGTTCTCTTTAACCAAAGGGCAATCAGAAACCTTTTTGTTTGTAGCTCTTGTTAAGAAACTTTAAAAACAAACTGT
CAAGTAGGGTGAAAGTAAAATCAAGATTGATGATTTTCAATTAAGAGTCACCATTCTGAATAGCATGCAGACATGTAAATCTGGGTAAATAAGATTAGGATGAATATATGTATTCTAGGATGTGTTCT
GATTGAGTTCTTCCCTCCTTCCCCCTGTCTTTCCTTCCTTCCAAGAATAAATTTCTGCAAAAATT

hide sequence

RefSeq Acc Id:

NM_001243489 ⟹ NP_001230418

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	11,842,855 - 11,867,716 (-)	NCBI

Sequence:

show sequence

ACACACGAGACAACTTTAAGGACACTAGGCAAGAGTAGTCTTATCCGAAGAGATAAGACCTCCAAAGACAAAGCGTCAGGATGCTTCAGTTAATGGGGGAAAATGAGAAGAATCTGGAAGTTTTGGGA
AATACCAGAAGGCCCGGAGTGTGGAAAGAGATTTCTTTTGGGGATTATATTTGTCACACGTTTCAGGGAGACTGCTGGGCCGATCGCTCTCCACTTCATGAGGCTGCGGCTCAGGGGCGCCTGCTGGC
CCTTAAAACCTTAATTGCACAAGGTGTCAACGTGAACCTGGTAACCATTAACCGCGTGTCTTCTCTGCATGAGGCGTGCCTCGGCGGCCACGTGGCCTGCGCGAAGGCCCTATTGGAGAACGGCGCAC
ACGTCAATGGGGTGACAGTTCACGGAGCCACGCCCCTCTTCAATGCGTGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAATTTGGAGCCAAGGCCCAGCTCGAGGTGCACCTGGCCTCG
CCCATCCACGAGGCAGTGAAGAGAGGCAATAGAGAGTGCATGGAGATTCTGCTGGCAAATAACGTTAACATCGACCAAGAAGTGCCTCACCTCGGAACTCCTCTGTATGTGGCTTGCACCTACCAGAG
AGTCGACTGTGTCAAGAAACTTCTAGAATTAGGAGCCAACGTTGACCATGGCCAATGGCTGGACAGTCCCCTGCATGCAGCTGCAAGGCAGAACAGTGTGGAAATCATTCACCTGCTGATAGACTTCG
GGGCTAACATCAAGGGCAAAAACGCTCAGGGCAAGATTGCACTTGATCTGGCAGCTCCAAAAAGCAGCGTGGAGCAGGCGCTCTTGCTCCGGGAAGGCCCACCCGCTCTTTCCCAGCTCTGCCGCCTG
TGTGTCCGGAAGTGCTTGGGTCGGACCTGTCATCAGACCATCCAGAAACTCTATCTGCCGGAGCCACTGGAAAGATTCCTCCTCTACCAGTAGTCCAACCTGGCCATGGGAAGATGCTTGGAAAGAAG
CAGGCCATTGCCTGCTGCACCCCGGGTACCTAGTGTAGACGCCCAACAGTTAGATTCCCAGTATCTTCCGACAAGCTAAGCTAGTTATGGCGAATCCTGACAAGCTAAGCAAGTTAGGGCGAATCCCT
GATGCCCCGCAACACTTGGGGAGTGGAAACTCCTGGTTACTTTGGTGTTCTCTTTAACCAAAGGGCAATCAGAAACCTTTTTGTTTGTAGCTCTTGTTAAGAAACTTTAAAAACAAACTGTCAAGTAG
GGTGAAAGTAAAATCAAGATTGATGATTTTCAATTAAGAGTCACCATTCTGAATAGCATGCAGACATGTAAATCTGGGTAAATAAGATTAGGATGAATATATGTATTCTAGGATGTGTTCTGATTGAG
TTCTTCCCTCCTTCCCCCTGTCTTTCCTTCCTTCCAAGAATAAATTTCTGCAAAAATT

hide sequence

RefSeq Acc Id:

XM_021079396 ⟹ XP_020935055

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	11,842,857 - 11,871,040 (-)	NCBI

Sequence:

show sequence

CTGGGCCTGAAGACTCCTGCCATGTCCTGCCATCCCACCACCTGCTGTCTGCCGCACGCAGTGG
GGTGTCGCTCCAGGACCTTGCTTCGGATGTACTGCTGGGCCGATCGCTCTCCACTTCATGAGGCTGCGGCTCAGGGGCGCCTGCTGGCCCTTAAAACCTTAATTGCACAAGGTGTCAACGTGAACCTG
GTAACCATTAACCGCGTGTCTTCTCTGCATGAGGCGTGCCTCGGCGGCCACGTGGCCTGCGCGAAGGCCCTATTGGAGAACGGCGCACACGTCAATGGGGTGACAGTTCACGGAGCCACGCCCCTCTT
CAATGCGTGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAATTTGGAGCCAAGGCCCAGCTCGAGGTGCACCTGGCCTCGCCCATCCACGAGGCAGTGAAGAGAGGCAATAGAGAGTGCA
TGGAGATTCTGCTGGCAAATAACGTTAACATCGACCAAGAAGTGCCTCACCTCGGAACTCCTCTGTATGTGGCTTGCACCTACCAGAGAGTCGACTGTGTCAAGAAACTTCTAGAATTAGGAGCCAAC
GTTGACCATGGCCAATGGCTGGACAGTCCCCTGCATGCAGCTGCAAGGCAGAACAGTGTGGAAATCATTCACCTGCTGATAGACTTCGGGGCTAACATCAAGGGCAAAAACGCTCAGGGCAAGATTGC
ACTTGATCTGGCAGCTCCAAAAAGCAGCGTGGAGCAGGCGCTCTTGCTCCGGGAAGGCCCACCCGCTCTTTCCCAGCTCTGCCGCCTGTGTGTCCGGAAGTGCTTGGGTCGGACCTGTCATCAGACCA
TCCAGAAACTCTATCTGCCGGAGCCACTGGAAAGATTCCTCCTCTACCAGTAGTCCAACCTGGCCATGGGAAGATGCTTGGAAAGAAGCAGGCCATTGCCTGCTGCACCCCGGGTACCTAGTGTAGAC
GCCCAACAGTTAGATTCCCAGTATCTTCCGACAAGCTAAGCTAGTTATGGCGAATCCTGACAAGCTAAGCAAGTTAGGGCGAATCCCTGATGCCCCGCAACACTTGGGGAGTGGAAACTCCTGGTTAC
TTTGGTGTTCTCTTTAACCAAAGGGCAATCAGAAACCTTTTTGTTTGTAGCTCTTGTTAAGAAACTTTAAAAACAAACTGTCAAGTAGGGTGAAAGTAAAATCAAGATTGATGATTTTCAATTAAGAG
TCACCATTCTGAATAGCATGCAGACATGTAAATCTGGGTAAATAAGATTAGGATGAATATATGTATTCTAGGATGTGTTCTGATTGAGTTCTTCCCTCCTTCCCCCTGTCTTTCCTTCCTTCCAAGAA
TAAATTTCTGCAAAAA

hide sequence

RefSeq Acc Id:

XM_021079397 ⟹ XP_020935056

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	11,842,857 - 11,863,266 (-)	NCBI

Sequence:

show sequence

ACCTGCCTGGGCGGGACAGAGGGCCATCCCCTGCCCTGAGAATGGGCAGAGGAGCGGAGATGAC
AGTTTGAAAGGGGACTGACCAGCAGACAGGCGGTTTTTAAACCTCTCCATTGAAGTATGCTAAAAATATAGACAAGTGCCAAGAGCCGGGGGAATTTTCACAGTTGGGCACCAGCTCCCAGGAGCAAG
AACCTGCCTGTTATCAGCATGGCCCCCACCACGGCCAGCTTTAGCCAAACCCTGGTGCTTCTGGCTCCTAACACCCATGACTGCTGGGCCGATCGCTCTCCACTTCATGAGGCTGCGGCTCAGGGGCG
CCTGCTGGCCCTTAAAACCTTAATTGCACAAGGTGTCAACGTGAACCTGGTAACCATTAACCGCGTGTCTTCTCTGCATGAGGCGTGCCTCGGCGGCCACGTGGCCTGCGCGAAGGCCCTATTGGAGA
ACGGCGCACACGTCAATGGGGTGACAGTTCACGGAGCCACGCCCCTCTTCAATGCGTGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAATTTGGAGCCAAGGCCCAGCTCGAGGTGCAC
CTGGCCTCGCCCATCCACGAGGCAGTGAAGAGAGGCAATAGAGAGTGCATGGAGATTCTGCTGGCAAATAACGTTAACATCGACCAAGAAGTGCCTCACCTCGGAACTCCTCTGTATGTGGCTTGCAC
CTACCAGAGAGTCGACTGTGTCAAGAAACTTCTAGAATTAGGAGCCAACGTTGACCATGGCCAATGGCTGGACAGTCCCCTGCATGCAGCTGCAAGGCAGAACAGTGTGGAAATCATTCACCTGCTGA
TAGACTTCGGGGCTAACATCAAGGGCAAAAACGCTCAGGGCAAGATTGCACTTGATCTGGCAGCTCCAAAAAGCAGCGTGGAGCAGGCGCTCTTGCTCCGGGAAGGCCCACCCGCTCTTTCCCAGCTC
TGCCGCCTGTGTGTCCGGAAGTGCTTGGGTCGGACCTGTCATCAGACCATCCAGAAACTCTATCTGCCGGAGCCACTGGAAAGATTCCTCCTCTACCAGTAGTCCAACCTGGCCATGGGAAGATGCTT
GGAAAGAAGCAGGCCATTGCCTGCTGCACCCCGGGTACCTAGTGTAGACGCCCAACAGTTAGATTCCCAGTATCTTCCGACAAGCTAAGCTAGTTATGGCGAATCCTGACAAGCTAAGCAAGTTAGGG
CGAATCCCTGATGCCCCGCAACACTTGGGGAGTGGAAACTCCTGGTTACTTTGGTGTTCTCTTTAACCAAAGGGCAATCAGAAACCTTTTTGTTTGTAGCTCTTGTTAAGAAACTTTAAAAACAAACT
GTCAAGTAGGGTGAAAGTAAAATCAAGATTGATGATTTTCAATTAAGAGTCACCATTCTGAATAGCATGCAGACATGTAAATCTGGGTAAATAAGATTAGGATGAATATATGTATTCTAGGATGTGTT
CTGATTGAGTTCTTCCCTCCTTCCCCCTGTCTTTCCTTCCTTCCAAGAATAAATTTCTGCAAAAA

hide sequence


Protein RefSeqs	NP_001230417	(Get FASTA)	NCBI Sequence Viewer
	NP_001230418	(Get FASTA)	NCBI Sequence Viewer
	XP_020935055	(Get FASTA)	NCBI Sequence Viewer
	XP_020935056	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000012916
	ENSSSCP00000012916.2
	ENSSSCP00000023628
	ENSSSCP00000023628.1
	ENSSSCP00015003745.1
	ENSSSCP00015003764.1
	ENSSSCP00025043098.1
	ENSSSCP00025043151.1
	ENSSSCP00035011264.1
	ENSSSCP00035011267.1
	ENSSSCP00040007864.1
	ENSSSCP00040007874.1
	ENSSSCP00045031059.1
	ENSSSCP00045031116.1
	ENSSSCP00050035096.1
	ENSSSCP00050035098.1
	ENSSSCP00055008103.1
	ENSSSCP00055008134.1
	ENSSSCP00060015995.1
	ENSSSCP00060016000.1
	ENSSSCP00060016035.1
	ENSSSCP00065030897.1
	ENSSSCP00065030903.1
	ENSSSCP00070032692.1
	ENSSSCP00070032699.1

RefSeq Acc Id:	NP_001230417 ⟸ NM_001243488
- Peptide Label:	isoform a
- UniProtKB:	F1SQU6 (UniProtKB/TrEMBL), A0A4X1UTA2 (UniProtKB/TrEMBL), A0A8D1PVG4 (UniProtKB/TrEMBL), A0A8D0JMV7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEDAPVAYGFPNIFITMFATFFFFKLLIKVFLALLTHFYIVKGNRKEAARIAEEIYGEISDCWADRSPLHEAAAQGRLLALKTLIAQGVNVNLVTINRVSSLHEACLGGHVACAKALLENGAHVNGVT VHGATPLFNACCSGSAACVNVLLEFGAKAQLEVHLASPIHEAVKRGNRECMEILLANNVNIDQEVPHLGTPLYVACTYQRVDCVKKLLELGANVDHGQWLDSPLHAAARQNSVEIIHLLIDFGANIKG KNAQGKIALDLAAPKSSVEQALLLREGPPALSQLCRLCVRKCLGRTCHQTIQKLYLPEPLERFLLYQ hide sequence

RefSeq Acc Id:	NP_001230418 ⟸ NM_001243489
- Peptide Label:	isoform b
- UniProtKB:	I3LHT1 (UniProtKB/TrEMBL), A0A4X1URL3 (UniProtKB/TrEMBL), A0A8D1PVG4 (UniProtKB/TrEMBL), A0A8D1PS52 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLQLMGENEKNLEVLGNTRRPGVWKEISFGDYICHTFQGDCWADRSPLHEAAAQGRLLALKTLIAQGVNVNLVTINRVSSLHEACLGGHVACAKALLENGAHVNGVTVHGATPLFNACCSGSAACVNV LLEFGAKAQLEVHLASPIHEAVKRGNRECMEILLANNVNIDQEVPHLGTPLYVACTYQRVDCVKKLLELGANVDHGQWLDSPLHAAARQNSVEIIHLLIDFGANIKGKNAQGKIALDLAAPKSSVEQA LLLREGPPALSQLCRLCVRKCLGRTCHQTIQKLYLPEPLERFLLYQ hide sequence

RefSeq Acc Id:

XP_020935055 ⟸ XM_021079396

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSCHPTTCCLPHAVGCRSRTLLRMYCWADRSPLHEAAAQGRLLALKTLIAQGVNVNLVTINRVS
SLHEACLGGHVACAKALLENGAHVNGVTVHGATPLFNACCSGSAACVNVLLEFGAKAQLEVHLASPIHEAVKRGNRECMEILLANNVNIDQEVPHLGTPLYVACTYQRVDCVKKLLELGANVDHGQWL
DSPLHAAARQNSVEIIHLLIDFGANIKGKNAQGKIALDLAAPKSSVEQALLLREGPPALSQLCRLCVRKCLGRTCHQTIQKLYLPEPLERFLLYQ

hide sequence

RefSeq Acc Id:

XP_020935056 ⟸ XM_021079397

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAPTTASFSQTLVLLAPNTHDCWADRSPLHEAAAQGRLLALKTLIAQGVNVNLVTINRVSSLHEACLGGHVACAKALLENGAHVNGVTVHGATPLFNACCSGSAACVNVLLEFGAKAQLEVHLASPIH
EAVKRGNRECMEILLANNVNIDQEVPHLGTPLYVACTYQRVDCVKKLLELGANVDHGQWLDSPLHAAARQNSVEIIHLLIDFGANIKGKNAQGKIALDLAAPKSSVEQALLLREGPPALSQLCRLCVR
KCLGRTCHQTIQKLYLPEPLERFLLYQ

hide sequence

Ensembl Acc Id:

ENSSSCP00000012916 ⟸ ENSSSCT00000013272

Protein Domains

Glycosyl transferase family PIGA GPI anchor biosynthesis SOCS box

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000012133	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015007088	UniProtKB/TrEMBL
	ENSSSCG00025071360	UniProtKB/TrEMBL
	ENSSSCG00035022346	UniProtKB/TrEMBL
	ENSSSCG00040014283	UniProtKB/TrEMBL
	ENSSSCG00045026300	UniProtKB/TrEMBL
	ENSSSCG00050059999	UniProtKB/TrEMBL
	ENSSSCG00055005260	UniProtKB/TrEMBL
	ENSSSCG00060027810	UniProtKB/TrEMBL
	ENSSSCG00065051761	UniProtKB/TrEMBL
	ENSSSCG00070019724	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000013272	ENTREZGENE
	ENSSSCT00000013272.6	UniProtKB/TrEMBL
	ENSSSCT00000032369	ENTREZGENE
	ENSSSCT00000032369.4	UniProtKB/TrEMBL
	ENSSSCT00015009392.1	UniProtKB/TrEMBL
	ENSSSCT00015009448.1	UniProtKB/TrEMBL
	ENSSSCT00025098042.1	UniProtKB/TrEMBL
	ENSSSCT00025098150.1	UniProtKB/TrEMBL
	ENSSSCT00035029170.1	UniProtKB/TrEMBL
	ENSSSCT00035029176.1	UniProtKB/TrEMBL
	ENSSSCT00040019107.1	UniProtKB/TrEMBL
	ENSSSCT00040019127.1	UniProtKB/TrEMBL
	ENSSSCT00045044768.1	UniProtKB/TrEMBL
	ENSSSCT00045044846.1	UniProtKB/TrEMBL
	ENSSSCT00050081742.1	UniProtKB/TrEMBL
	ENSSSCT00050081746.1	UniProtKB/TrEMBL
	ENSSSCT00055010257.1	UniProtKB/TrEMBL
	ENSSSCT00055010297.1	UniProtKB/TrEMBL
	ENSSSCT00060037626.1	UniProtKB/TrEMBL
	ENSSSCT00060037634.1	UniProtKB/TrEMBL
	ENSSSCT00060037689.1	UniProtKB/TrEMBL
	ENSSSCT00065070881.1	UniProtKB/TrEMBL
	ENSSSCT00065070892.1	UniProtKB/TrEMBL
	ENSSSCT00070039035.1	UniProtKB/TrEMBL
	ENSSSCT00070039043.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
	Glycogen Phosphorylase B	UniProtKB/TrEMBL
	SOCS box	UniProtKB/TrEMBL
InterPro	Ankyrin-SOCS_box_domain	UniProtKB/TrEMBL
	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	ASB9/11_SOCS	UniProtKB/TrEMBL
	Glyco_trans_1	UniProtKB/TrEMBL
	PIG-A/GPI3	UniProtKB/TrEMBL
	PIGA_GPI_anchor_biosynthesis	UniProtKB/TrEMBL
	SOCS_box	UniProtKB/TrEMBL
	SOCS_box-like_dom_sf	UniProtKB/TrEMBL
KEGG Report	ssc:100154431	UniProtKB/TrEMBL
NCBI Gene	ASB11	ENTREZGENE
PANTHER	ANKYRIN REPEAT AND SOCS BOX PROTEIN 11	UniProtKB/TrEMBL
	N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN	UniProtKB/TrEMBL
	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT A	UniProtKB/TrEMBL
	SOWAH (DROSOPHILA) HOMOLOG	UniProtKB/TrEMBL
Pfam	Ank	UniProtKB/TrEMBL
	Ank_2	UniProtKB/TrEMBL
	Glycos_transf_1	UniProtKB/TrEMBL
	PIGA	UniProtKB/TrEMBL
	SOCS_box	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
	SOCS	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
	SOCS_box	UniProtKB/TrEMBL
Superfamily-SCOP	SSF158235	UniProtKB/TrEMBL
	SSF48403	UniProtKB/TrEMBL
	UDP-Glycosyltransferase/glycogen phosphorylase	UniProtKB/TrEMBL
UniProt	A0A4X1URL3	ENTREZGENE
	A0A4X1UTA2	ENTREZGENE
	A0A8D0JMV7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1NAH1_PIG	UniProtKB/TrEMBL
	A0A8D1PS52	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1PVG4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1UXS9_PIG	UniProtKB/TrEMBL
	F1SQU6	ENTREZGENE, UniProtKB/TrEMBL
	I3LHT1	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A4X1URL3	UniProtKB/TrEMBL
	A0A4X1UTA2	UniProtKB/TrEMBL
VGNC ID	VGNC:85560	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Imported Disease Annotations - ClinVar