Spetex2b (Spetex-2B protein) - Rat Genome Database

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Gene: Spetex2b (Spetex-2B protein) Rattus norvegicus
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Symbol: Spetex2b
Name: Spetex-2B protein
RGD ID: 1359347
Description: INTERACTS WITH cefaloridine; indole-3-methanol; lead nitrate
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Spetex-2B
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8155,806,975 - 5,810,125 (-)NCBIGRCr8
UTH_Rnor_SHR_UtxPNT010001256.13,581 - 6,731 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0EKU010000069.114,856 - 18,006 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0155,441,521 - 5,444,671 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.081,932,820 - 1,933,017 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
RGSC_v3.4156,011,208 - 6,014,735 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1156,011,207 - 6,104,713 (+)NCBI
Cytogenetic Map8q11NCBI


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Molecular cloning of rat Spetex2 family genes mapped on chromosome 15p16, encoding a 23-kilodalton protein associated with the plasma membranes of haploid spermatids. Iwamoto Y, etal., Biol Reprod 2005 Feb;72(2):284-92. Epub 2004 Sep 15.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: NM_001011697   ⟹   NP_001011697
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8155,806,975 - 5,810,125 (-)NCBI
Rnor_6.081,932,820 - 1,933,017 (+)NCBI
RGSC_v3.4156,011,208 - 6,014,735 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001011697 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAD83783 (Get FASTA)   NCBI Sequence Viewer  
  BAD83784 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001011697   ⟸   NM_001011697
- UniProtKB: Q5KT08 (UniProtKB/TrEMBL),   Q5KT07 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Disks large homolog 5 N-terminal


Additional Information

Database Acc Id Source(s)
InterPro DUF622 UniProtKB/TrEMBL
KEGG Report rno:497084 UniProtKB/TrEMBL
NCBI Gene 497084 ENTREZGENE
PANTHER 2610042L04RIK PROTEIN-RELATED UniProtKB/TrEMBL
  SPEER/SPETEX UniProtKB/TrEMBL
Pfam DUF622 UniProtKB/TrEMBL
PhenoGen Spetex2b PhenoGen
UniProt Q5KT07 ENTREZGENE
  Q5KT08 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-05 Spetex2b  Spetex-2B protein  Spetex-2B  Spetex-2B protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-07-29 Spetex-2B  Spetex-2B protein      Symbol and Name status set to provisional 70820 PROVISIONAL