SIGLEC26P (sialic acid binding Ig like lectin 26, pseudogene) - Rat Genome Database

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Gene: SIGLEC26P (sialic acid binding Ig like lectin 26, pseudogene) Homo sapiens
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Symbol: SIGLEC26P
Name: sialic acid binding Ig like lectin 26, pseudogene
RGD ID: 1354111
HGNC Page HGNC:15615
Description:
Type: pseudo
RefSeq Status: VALIDATED
Previously known as: SIGLECP10
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381951,468,649 - 51,469,530 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371951,971,903 - 51,972,784 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361956,663,715 - 56,664,596 (-)NCBINCBI36Build 36hg18NCBI36
Celera1949,022,940 - 49,023,821 (-)NCBICelera
Cytogenetic Map19q13.41NCBI
HuRef1948,303,855 - 48,304,736 (-)NCBIHuRef
CHM1_11951,973,797 - 51,974,678 (-)NCBICHM1_1
T2T-CHM13v2.01954,557,270 - 54,558,151 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:11546777  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:259
Count of miRNA genes:233
Interacting mature miRNAs:251
Transcripts:ENST00000594712
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1559110SCL22_HSerum cholesterol level QTL 22 (human)3.590.000241Lipid levelLDL cholesterol193190759457907594Human
1331657COPD9_HChronic obstructive pulmonary disease QTL 9 (human)1.94Chronic airflow obstructionpost-bronchodilator FEV1193102176057021760Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC SIGLEC26P COSMIC
GTEx SIGLEC26P GTEx
HGNC ID HGNC:15615 ENTREZGENE
Human Proteome Map SIGLEC26P Human Proteome Map
NCBI Gene 114185 ENTREZGENE
PharmGKB PA38000 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-26 SIGLEC26P  sialic acid binding Ig like lectin 26, pseudogene    sialic acid binding Ig-like lectin 26, pseudogene  Symbol and/or name change 5135510 APPROVED
2011-07-27 SIGLEC26P  sialic acid binding Ig-like lectin 26, pseudogene  SIGLECP10  sialic acid binding Ig-like lectin, pseudogene 10  Symbol and/or name change 5135510 APPROVED