OR11H3P (olfactory receptor family 11 subfamily H member 3 pseudogene) - Rat Genome Database

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Gene: OR11H3P (olfactory receptor family 11 subfamily H member 3 pseudogene) Homo sapiens
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Symbol: OR11H3P
Name: olfactory receptor family 11 subfamily H member 3 pseudogene
RGD ID: 1343903
HGNC Page HGNC:15367
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381522,009,549 - 22,010,495 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1522,009,547 - 22,010,529 (-)EnsemblGRCh38hg38GRCh38
GRCh371522,297,500 - 22,298,446 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361519,798,765 - 19,799,911 (-)NCBINCBI36Build 36hg18NCBI36
Cytogenetic Map15q11.2NCBI
HuRef15696,845 - 697,791 (-)NCBIHuRef
CHM1_11522,246,623 - 22,247,569 (-)NCBICHM1_1
T2T-CHM13v2.01518,915,115 - 18,916,061 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14983052  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:64
Count of miRNA genes:63
Interacting mature miRNAs:63
Transcripts:ENST00000554547
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2289410BW327_HBody weight QTL 327 (human)3.320.0001Body fat amount151998012945980129Human
2289430BMD7_HBone mineral density QTL 7 (human)3.320.0001Bone mineral density151998012945980129Human
1643523BW284_HBody Weight QTL 284 (human)1.950.0013Body weight152179288947792889Human
2289420BW314_HBody weight QTL 314 (human)2.720.0003Body weightlean mass151998012945980129Human


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
sensory system
19 43 25 14 49 14 32 5 30 3 24 81 78 43 19 282 22 2

Sequence


Ensembl Acc Id: ENST00000554547
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1522,009,547 - 22,010,529 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC OR11H3P COSMIC
Ensembl Genes ENSG00000258721 Ensembl, ENTREZGENE
GTEx ENSG00000258721 GTEx
HGNC ID HGNC:15367 ENTREZGENE
Human Proteome Map OR11H3P Human Proteome Map
NCBI Gene 81113 ENTREZGENE
PharmGKB PA32015 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-15 OR11H3P  olfactory receptor family 11 subfamily H member 3 pseudogene  OR11H3P  olfactory receptor, family 11, subfamily H, member 3 pseudogene  Symbol and/or name change 5135510 APPROVED