LOC111097149 (alpha-1-antiproteinase-like) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: LOC111097149 (alpha-1-antiproteinase-like) Canis lupus familiaris
Analyze
Symbol: LOC111097149
Name: alpha-1-antiproteinase-like
RGD ID: 13323700
Description: ENCODES a protein that exhibits peptidase inhibitor activity (inferred); serine-type endopeptidase inhibitor activity (inferred); FOUND IN extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1863,376,521 - 63,400,253 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha862,953,082 - 62,958,223 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0863,642,226 - 63,647,483 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1863,318,726 - 63,323,971 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0863,370,994 - 63,376,140 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0863,701,673 - 63,706,800 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC111097149Dogextracellular space located_inIEAInterPro:IPR000215150520179 InterProGO_REF:0000002
LOC111097149Dogextracellular space is_active_inIBAFB:FBgn0002930 more ...150520179 GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC111097149Dogpeptidase inhibitor activity enablesIEAUniProtKB-KW:KW-0646150520179 UniProtGO_REF:0000043
LOC111097149Dogserine-type endopeptidase inhibitor activity enablesIEAInterPro:IPR000215150520179 InterProGO_REF:0000002
LOC111097149Dogserine-type endopeptidase inhibitor activity enablesIEAUniProtKB-KW:KW-0722150520179 UniProtGO_REF:0000043
LOC111097149Dogserine-type endopeptidase inhibitor activity enablesIBAMGI:891970 more ...150520179 GO_CentralGO_REF:0000033

PMID:30032202  



.

.
Variants in LOC111097149
689 total Variants






RefSeq Acc Id: XM_022422351   ⟹   XP_022278059
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1863,376,521 - 63,400,253 (-)NCBI
Dog10K_Boxer_Tasha862,953,082 - 62,958,223 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038484477   ⟹   XP_038340405
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1863,318,726 - 63,323,971 (-)NCBI
RefSeq Acc Id: XM_038544052   ⟹   XP_038399980
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0863,701,673 - 63,706,800 (-)NCBI
RefSeq Acc Id: XM_038608177   ⟹   XP_038464105
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0863,370,994 - 63,376,140 (-)NCBI
RefSeq Acc Id: XM_038672977   ⟹   XP_038528905
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0863,642,226 - 63,647,483 (-)NCBI
Protein RefSeqs XP_022278059 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340405 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399980 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464105 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528905 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00040006525.1
  ENSCAFP00845004188.1
  ENSCAFP00845004198.1
RefSeq Acc Id: XP_022278059   ⟸   XM_022422351
- UniProtKB: A0A8C0Q3N7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038340405   ⟸   XM_038484477
RefSeq Acc Id: XP_038464105   ⟸   XM_038608177
RefSeq Acc Id: XP_038528905   ⟸   XM_038672977
- UniProtKB: A0A8C0Q3N7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399980   ⟸   XM_038544052
- UniProtKB: A0A8C0Q3N7 (UniProtKB/TrEMBL)
SERPIN



1 to 22 of 22 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00040003880 UniProtKB/TrEMBL
  ENSCAFG00845002979 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00040007492.1 UniProtKB/TrEMBL
  ENSCAFT00845005268.1 UniProtKB/TrEMBL
  ENSCAFT00845005281.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.39.10 UniProtKB/TrEMBL
  3.30.497.10 UniProtKB/TrEMBL
  Serpins superfamily UniProtKB/TrEMBL
InterPro Serpin_dom UniProtKB/TrEMBL
  Serpin_fam UniProtKB/TrEMBL
  Serpin_sf UniProtKB/TrEMBL
  Serpin_sf_1 UniProtKB/TrEMBL
  Serpin_sf_2 UniProtKB/TrEMBL
NCBI Gene LOC111097149 ENTREZGENE
PANTHER ALPHA-1-ANTITRYPSIN UniProtKB/TrEMBL
  PTHR11461 UniProtKB/TrEMBL
Pfam Serpin UniProtKB/TrEMBL
SMART SERPIN UniProtKB/TrEMBL
Superfamily-SCOP SSF56574 UniProtKB/TrEMBL
UniProt A0A8C0Q3N7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MGT3_CANLF UniProtKB/TrEMBL
  A0A8I3RR27_CANLF UniProtKB/TrEMBL
1 to 22 of 22 rows