LOC111094784 (protein C-ets-1-like) - Rat Genome Database

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Gene: LOC111094784 (protein C-ets-1-like) Canis lupus familiaris
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Symbol: LOC111094784
Name: protein C-ets-1-like
RGD ID: 13313135
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); sequence-specific DNA binding (inferred); INVOLVED IN regulation of transcription by RNA polymerase II (inferred); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100682627; protein C-ets-1 pseudogene; uncharacterized LOC111094784
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X67,018,101 - 67,131,937 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX57,824,554 - 57,897,228 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X68,398,035 - 68,432,898 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X66,036,491 - 66,109,157 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X67,677,165 - 67,749,829 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X67,270,181 - 67,349,457 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC111094784
1213 total Variants

Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_038450399   ⟹   XP_038306327
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X68,398,035 - 68,432,898 (-)NCBI
RefSeq Acc Id: XM_038464860   ⟹   XP_038320788
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_TashaX57,824,554 - 57,897,228 (-)NCBI
RefSeq Acc Id: XM_038523857   ⟹   XP_038379785
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X66,036,491 - 66,109,157 (-)NCBI
RefSeq Acc Id: XM_038587822   ⟹   XP_038443750
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X67,270,181 - 67,349,457 (-)NCBI
RefSeq Acc Id: XM_038652347   ⟹   XP_038508275
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X67,677,165 - 67,749,829 (-)NCBI
RefSeq Acc Id: XP_038379785   ⟸   XM_038523857
RefSeq Acc Id: XP_038508275   ⟸   XM_038652347
RefSeq Acc Id: XP_038306327   ⟸   XM_038450399
- UniProtKB: A0A8C0P2Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038320788   ⟸   XM_038464860
- UniProtKB: A0A8C0P2Z3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443750   ⟸   XM_038587822
- UniProtKB: A0A8C0SC19 (UniProtKB/TrEMBL)
Protein Domains
ETS   PNT


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00030020202 UniProtKB/TrEMBL
  ENSCAFG00040011576 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030037175.1 UniProtKB/TrEMBL
  ENSCAFT00040021574.1 UniProtKB/TrEMBL
Gene3D-CATH Transcription Factor, Ets-1 UniProtKB/TrEMBL
  Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain UniProtKB/TrEMBL
InterPro Ets1_N_flank UniProtKB/TrEMBL
  Ets_dom UniProtKB/TrEMBL
  ETS_fam UniProtKB/TrEMBL
  Pointed_dom UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
NCBI Gene LOC111094784 ENTREZGENE
PANTHER ETS UniProtKB/TrEMBL
  V-ETS AVIAN ERYTHROBLASTOSIS VIRUS E26 ONCO HOMOLOG 1 UniProtKB/TrEMBL
Pfam Ets UniProtKB/TrEMBL
  Ets1_N_flank UniProtKB/TrEMBL
  SAM_PNT UniProtKB/TrEMBL
PRINTS ETSDOMAIN UniProtKB/TrEMBL
PROSITE ETS_DOMAIN_1 UniProtKB/TrEMBL
  ETS_DOMAIN_3 UniProtKB/TrEMBL
  PNT UniProtKB/TrEMBL
SMART ETS UniProtKB/TrEMBL
  SAM_PNT UniProtKB/TrEMBL
Superfamily-SCOP SAM/Pointed domain UniProtKB/TrEMBL
  Winged helix' DNA-binding domain UniProtKB/TrEMBL
UniProt A0A8C0P2Z3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SC19 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-14 LOC111094784  protein C-ets-1-like  LOC100682627  protein C-ets-1 pseudogene  Data merged from RGD:12331562 737654 PROVISIONAL
2021-01-12 LOC111094784  protein C-ets-1-like  LOC111094784  uncharacterized LOC111094784  Symbol and/or name change 5135510 APPROVED