Lpin3 (lipin 3) - Rat Genome Database

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Gene: Lpin3 (lipin 3) Mus musculus
Analyze
Symbol: Lpin3
Name: lipin 3
RGD ID: 1320606
MGI Page MGI
Description: Enables phosphatidate phosphatase activity. Predicted to be involved in several processes, including cellular response to insulin stimulus; positive regulation of transcription by RNA polymerase II; and triglyceride biosynthetic process. Predicted to be active in nucleus. Is expressed in several structures, including adrenal gland; genitourinary system; gut; skin; and trachea. Orthologous to human LPIN3 (lipin 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 9130206L11Rik; AA438110; AV236139; KIAA4023; lipin-3; MGC143991; MGC143992; mKIAA4023; phosphatidate phosphatase LPIN3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392160,722,590 - 160,747,920 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2160,722,590 - 160,747,922 (+)EnsemblGRCm39 Ensembl
GRCm382160,880,670 - 160,906,000 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2160,880,670 - 160,906,002 (+)EnsemblGRCm38mm10GRCm38
MGSCv372160,706,469 - 160,731,528 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362160,572,174 - 160,597,233 (+)NCBIMGSCv36mm8
Celera2166,811,402 - 166,836,437 (+)NCBICelera
Cytogenetic Map2H2NCBI
cM Map280.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IBA,ISA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11138012   PMID:11217851   PMID:12477932   PMID:15181537   PMID:16141072   PMID:16141073   PMID:17158099   PMID:21267068   PMID:21677750  
PMID:21873635   PMID:24194600   PMID:24634820   PMID:26839965   PMID:27626380   PMID:28982975   PMID:30507612   PMID:32325033   PMID:37776435   PMID:38355793  


Genomics

Comparative Map Data
Lpin3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392160,722,590 - 160,747,920 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2160,722,590 - 160,747,922 (+)EnsemblGRCm39 Ensembl
GRCm382160,880,670 - 160,906,000 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2160,880,670 - 160,906,002 (+)EnsemblGRCm38mm10GRCm38
MGSCv372160,706,469 - 160,731,528 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362160,572,174 - 160,597,233 (+)NCBIMGSCv36mm8
Celera2166,811,402 - 166,836,437 (+)NCBICelera
Cytogenetic Map2H2NCBI
cM Map280.98NCBI
LPIN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382041,340,821 - 41,360,582 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2041,340,821 - 41,360,582 (+)EnsemblGRCh38hg38GRCh38
GRCh372039,969,461 - 39,989,222 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362039,402,974 - 39,422,636 (+)NCBINCBI36Build 36hg18NCBI36
Celera2036,680,226 - 36,699,888 (+)NCBICelera
Cytogenetic Map20q12NCBI
HuRef2036,707,814 - 36,727,419 (+)NCBIHuRef
CHM1_12039,873,839 - 39,893,508 (+)NCBICHM1_1
T2T-CHM13v2.02043,072,623 - 43,092,380 (+)NCBIT2T-CHM13v2.0
Lpin3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83169,953,479 - 169,978,034 (+)NCBIGRCr8
mRatBN7.23149,533,719 - 149,558,494 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3149,534,051 - 149,558,327 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3153,358,261 - 153,371,255 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03161,857,652 - 161,870,646 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03159,597,498 - 159,610,482 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03156,874,805 - 156,899,601 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3156,886,454 - 156,899,436 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03163,102,102 - 163,126,692 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43151,689,960 - 151,702,944 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3148,217,925 - 148,230,909 (+)NCBICelera
Cytogenetic Map3q42NCBI
Lpin3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544515,596,832 - 15,615,900 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544515,600,510 - 15,616,452 (-)NCBIChiLan1.0ChiLan1.0
LPIN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22147,082,827 - 47,102,569 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12047,075,963 - 47,094,729 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02037,682,636 - 37,702,357 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12038,778,785 - 38,798,502 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2038,778,695 - 38,798,502 (+)Ensemblpanpan1.1panPan2
LPIN3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12429,343,658 - 29,360,472 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2429,347,627 - 29,399,854 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2428,988,938 - 29,005,758 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02430,048,503 - 30,065,326 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2430,048,549 - 30,065,326 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12429,317,348 - 29,334,163 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02429,420,824 - 29,437,634 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02429,917,336 - 29,934,167 (+)NCBIUU_Cfam_GSD_1.0
Lpin3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640178,301,812 - 178,318,993 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936561431,866 - 443,307 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936561430,491 - 443,307 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LPIN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1743,989,333 - 44,006,262 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11743,993,710 - 44,006,188 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21749,433,516 - 49,450,557 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LPIN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1222,412,858 - 22,432,563 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl222,410,294 - 22,424,587 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605071,231,337 - 71,250,938 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lpin3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479012,895,047 - 12,906,700 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479012,893,588 - 12,910,921 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Lpin3
1491 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1918
Count of miRNA genes:492
Interacting mature miRNAs:587
Transcripts:ENSMUST00000040872, ENSMUST00000109455, ENSMUST00000109456, ENSMUST00000109457, ENSMUST00000124920
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
12910800Pwgrq3_mpre-weaning growth rate QTL 3 (mouse)2160611165169794802Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152329820181755017Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2149988902181755017Mouse
1300622Cfld1_mcystic fibrosis lung disease 1 (mouse)Not determined2155823920181755017Mouse
12910810Pwbwq2_mpre-weaning body weight QTL 2 (mouse)2160611165169794802Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
1558842Tailq2_mtail length QTL 2 (mouse)Not determined2151640941162737074Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
10412080Hylaq2_mHyperlocomotor activity related QTL 2 (mouse)Not determined2151640941164119146Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
1357862Epfq1_mepididymal fat pad weight QTL 1 (mouse)Not determined2151640941162737074Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127664019161664118Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
1357484Bsbob_mBSB obesity (mouse)Not determined2143773445165665019Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
1300688Nidd2k_mNidd2 on KK-A (mouse)Not determined2158078337178442452Mouse
1558867Gnf3_mgrowth and fatness 3 (mouse)Not determined2152699221169117924Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150212221181755017Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
1558852Gnf2_mgrowth and fatness 2 (mouse)Not determined2152699221162197085Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145228719179228841Mouse
1357772Scfq1_msubcutaneous fat pad weight QTL 1 (mouse)Not determined2151640941162737074Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127664019161664118Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145196949179197085Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129341920163341920Mouse
13504830Bacsq1_mbaculum shape QTL 1 (mouse)2145716184161016184Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1357537Lith12_mlithogenic gene 12 (mouse)Not determined2156196464181755017Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133144911167145058Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133144911167145058Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145518775179518926Mouse
12910520Scgq3_mspontaneous crescentic glomerulonephritis QTL 3 (mouse)2151709273174389124Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse

Markers in Region
UniSTS:234567  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382160,880,190 - 160,880,482UniSTSGRCm38
MGSCv372160,705,926 - 160,706,218UniSTSGRCm37
Celera2166,810,859 - 166,811,151UniSTS
Cytogenetic Map2H2UniSTS
AV236139  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382160,905,611 - 160,905,750UniSTSGRCm38
MGSCv372160,731,347 - 160,731,486UniSTSGRCm37
Celera2166,836,256 - 166,836,395UniSTS
Cytogenetic Map2H2UniSTS
Whitehead/MRC_RH21816.87UniSTS
MARC_23321-23322:1024689677:5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382160,903,961 - 160,904,541UniSTSGRCm38
MGSCv372160,729,697 - 160,730,277UniSTSGRCm37
Celera2166,834,606 - 166,835,186UniSTS
Cytogenetic Map2H2UniSTS
Lpin3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382160,905,393 - 160,905,486UniSTSGRCm38
MGSCv372160,731,129 - 160,731,222UniSTSGRCm37
Celera2166,836,038 - 166,836,131UniSTS
Cytogenetic Map2H2UniSTS
cM Map2 UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000040872   ⟹   ENSMUSP00000043053
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,730,028 - 160,747,922 (+)Ensembl
GRCm38.p6 Ensembl2160,888,108 - 160,906,002 (+)Ensembl
Ensembl Acc Id: ENSMUST00000109455   ⟹   ENSMUSP00000105081
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,730,028 - 160,747,922 (+)Ensembl
GRCm38.p6 Ensembl2160,888,108 - 160,906,002 (+)Ensembl
Ensembl Acc Id: ENSMUST00000109456   ⟹   ENSMUSP00000105082
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,722,590 - 160,747,917 (+)Ensembl
GRCm38.p6 Ensembl2160,880,670 - 160,905,997 (+)Ensembl
Ensembl Acc Id: ENSMUST00000109457   ⟹   ENSMUSP00000105083
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,730,091 - 160,747,712 (+)Ensembl
GRCm38.p6 Ensembl2160,888,171 - 160,905,792 (+)Ensembl
Ensembl Acc Id: ENSMUST00000124920
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,743,469 - 160,745,657 (+)Ensembl
GRCm38.p6 Ensembl2160,901,549 - 160,903,737 (+)Ensembl
RefSeq Acc Id: NM_001199118   ⟹   NP_001186047
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392160,730,088 - 160,747,920 (+)NCBI
GRCm382160,888,168 - 160,906,000 (+)NCBI
Celera2166,811,339 - 166,836,645 (+)ENTREZGENE
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_022883   ⟹   NP_075021
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392160,722,590 - 160,747,920 (+)NCBI
GRCm382160,880,670 - 160,906,000 (+)ENTREZGENE
MGSCv372160,706,469 - 160,731,528 (+)RGD
Celera2166,811,339 - 166,836,645 (+)ENTREZGENE
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XR_374499
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392160,730,012 - 160,746,834 (+)NCBI
GRCm382160,888,083 - 160,904,914 (+)NCBI
Sequence:
RefSeq Acc Id: XR_374500
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392160,730,009 - 160,746,773 (+)NCBI
GRCm382160,888,083 - 160,904,853 (+)NCBI
Sequence:
RefSeq Acc Id: NP_075021   ⟸   NM_022883
- UniProtKB: Q99PI4 (UniProtKB/Swiss-Prot),   Q3TQ75 (UniProtKB/Swiss-Prot),   Q8C7R9 (UniProtKB/Swiss-Prot),   A2A4B1 (UniProtKB/TrEMBL),   Q149B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001186047   ⟸   NM_001199118
- UniProtKB: Q99PI4 (UniProtKB/Swiss-Prot),   Q3TQ75 (UniProtKB/Swiss-Prot),   Q8C7R9 (UniProtKB/Swiss-Prot),   A2A4B1 (UniProtKB/TrEMBL),   Q149B0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000043053   ⟸   ENSMUST00000040872
Ensembl Acc Id: ENSMUSP00000105081   ⟸   ENSMUST00000109455
Ensembl Acc Id: ENSMUSP00000105082   ⟸   ENSMUST00000109456
Ensembl Acc Id: ENSMUSP00000105083   ⟸   ENSMUST00000109457
Protein Domains
LNS2/PITP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99PI4-F1-model_v2 AlphaFold Q99PI4 1-848 view protein structure

Promoters
RGD ID:6831728
Promoter ID:MM_KWN:32793
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000038180
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362160,706,274 - 160,706,774 (+)MPROMDB
RGD ID:6831727
Promoter ID:MM_KWN:32794
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000002304,   OTTMUST00000002305,   OTTMUST00000038181
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362160,713,301 - 160,713,927 (+)MPROMDB
RGD ID:6879534
Promoter ID:EPDNEW_M3218
Type:multiple initiation site
Name:Lpin3_2
Description:Mus musculus lipin 3 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3219  EPDNEW_M3220  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382160,880,644 - 160,880,704EPDNEW
RGD ID:6879536
Promoter ID:EPDNEW_M3219
Type:multiple initiation site
Name:Lpin3_1
Description:Mus musculus lipin 3 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3218  EPDNEW_M3220  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382160,888,106 - 160,888,166EPDNEW
RGD ID:6879538
Promoter ID:EPDNEW_M3220
Type:multiple initiation site
Name:Lpin3_3
Description:Mus musculus lipin 3 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M3218  EPDNEW_M3219  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382160,891,994 - 160,892,054EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1891342 AgrOrtholog
Ensembl Genes ENSMUSG00000027412 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000040872 ENTREZGENE
  ENSMUST00000040872.13 UniProtKB/Swiss-Prot
  ENSMUST00000109455.9 UniProtKB/TrEMBL
  ENSMUST00000109456 ENTREZGENE
  ENSMUST00000109456.9 UniProtKB/Swiss-Prot
  ENSMUST00000109457.3 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1000 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro HAD-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HAD_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LIPIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipin_mid UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LNS2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LNS2/PITP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:64899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1891342 ENTREZGENE
NCBI Gene 64899 ENTREZGENE
PANTHER PHOSPHATIDATE PHOSPHATASE LPIN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12181 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Lipin_mid UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LNS2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Lpin3 PhenoGen
SMART LNS2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56784 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2A4B1 ENTREZGENE, UniProtKB/TrEMBL
  A2A4B3_MOUSE UniProtKB/TrEMBL
  LPIN3_MOUSE UniProtKB/Swiss-Prot
  Q149B0 ENTREZGENE, UniProtKB/TrEMBL
  Q3TQ75 ENTREZGENE
  Q571G1_MOUSE UniProtKB/TrEMBL
  Q8C7R9 ENTREZGENE
  Q8CC87_MOUSE UniProtKB/TrEMBL
  Q99PI4 ENTREZGENE
UniProt Secondary Q3TQ75 UniProtKB/Swiss-Prot
  Q8C7R9 UniProtKB/Swiss-Prot