Kif20b (kinesin family member 20B) - Rat Genome Database

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Gene: Kif20b (kinesin family member 20B) Mus musculus
Analyze
Symbol: Kif20b
Name: kinesin family member 20B
RGD ID: 1318299
MGI Page MGI
Description: Predicted to enable several functions, including ATP hydrolysis activity; WW domain binding activity; and plus-end-directed microtubule motor activity. Involved in several processes, including positive regulation of mitotic cytokinetic process; positive regulation of neuron migration; and protein localization to microtubule. Acts upstream of or within neural tube closure; regulation of establishment of protein localization; and regulation of neuron migration. Located in several cellular components, including midbody; perinuclear region of cytoplasm; and spindle midzone. Is expressed in cerebral cortex marginal layer; cerebral cortex ventricular layer; cortical plate; and cortical subplate. Used to study microcephaly. Orthologous to human KIF20B (kinesin family member 20B).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 33cex; B130024C23; C330014J10Rik; Kif20; kinesin-like protein KIF20B; kinesin-related motor interacting with PIN1; M-phase phosphoprotein 1; ma; magoo; Mpho; Mphosph1; MPP1; N-6 kinesin
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391934,899,735 - 34,953,150 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1934,899,761 - 34,953,145 (+)EnsemblGRCm39 Ensembl
GRCm381934,922,335 - 34,975,750 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1934,922,361 - 34,975,745 (+)EnsemblGRCm38mm10GRCm38
MGSCv371934,996,848 - 35,050,221 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361934,988,361 - 35,041,746 (+)NCBIMGSCv36mm8
Celera1935,696,320 - 35,750,429 (+)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1929.79NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
microcephaly  (IAGP)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3-dimethoxynaphthalene-1,4-dione  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2-palmitoylglycerol  (ISO)
4-hydroxynon-2-enal  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acetylsalicylic acid  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
auraptene  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
butanal  (ISO)
C60 fullerene  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
cis-caffeic acid  (ISO)
cisplatin  (EXP)
copper(II) sulfate  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
D-glucose  (EXP)
DDE  (ISO)
diazinon  (ISO)
dibenz[a,h]anthracene  (EXP)
dichloroacetic acid  (EXP)
dicrotophos  (ISO)
dieldrin  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
diquat  (EXP)
erythromycin estolate  (ISO)
FR900359  (ISO)
fructose  (EXP)
furan  (ISO)
glucose  (EXP)
glycidol  (ISO)
hydrogen peroxide  (ISO)
lead(0)  (ISO)
leflunomide  (ISO)
lucanthone  (ISO)
methimazole  (ISO)
methylseleninic acid  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-Nitrosopyrrolidine  (ISO)
nickel sulfate  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (ISO)
PCB138  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenformin  (ISO)
phenobarbital  (EXP)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
pravastatin  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propanal  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (ISO)
sodium dodecyl sulfate  (ISO)
succimer  (EXP)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trans-caffeic acid  (ISO)
Tributyltin oxide  (EXP)
trichloroethene  (EXP,ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
troglitazone  (ISO)
trovafloxacin  (EXP)
valproic acid  (ISO)
zaragozic acid A  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centrosome  (ISO,ISS)
contractile ring  (ISO,ISS)
cytoplasm  (IBA,ISO)
cytosol  (IEA,ISO)
growth cone  (IEA)
intercellular bridge  (IEA,ISO)
kinesin complex  (IBA)
microtubule  (IBA,IEA)
microtubule cytoskeleton  (IDA)
midbody  (IDA,ISO)
mitotic spindle midzone  (ISO,ISS)
mitotic spindle pole  (ISO,ISS)
nucleolus  (ISO,ISS)
nucleoplasm  (ISO,ISS)
nucleus  (IBA,IDA,ISO,ISS)
perinuclear region of cytoplasm  (IDA)
spindle midzone  (IDA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11416179   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15496924   PMID:15755804  
PMID:16141072   PMID:16141073   PMID:17967808   PMID:18799693   PMID:21214893   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22922362   PMID:23349951   PMID:23864681   PMID:24173802  
PMID:24457600   PMID:26496610   PMID:28359322   PMID:29208648   PMID:30304535   PMID:30595499   PMID:31904480   PMID:32273386   PMID:32325033   PMID:33554859   PMID:34321999   PMID:37253089  


Genomics

Comparative Map Data
Kif20b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391934,899,735 - 34,953,150 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1934,899,761 - 34,953,145 (+)EnsemblGRCm39 Ensembl
GRCm381934,922,335 - 34,975,750 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1934,922,361 - 34,975,745 (+)EnsemblGRCm38mm10GRCm38
MGSCv371934,996,848 - 35,050,221 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361934,988,361 - 35,041,746 (+)NCBIMGSCv36mm8
Celera1935,696,320 - 35,750,429 (+)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1929.79NCBI
KIF20B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381089,701,590 - 89,774,934 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1089,701,590 - 89,774,939 (+)EnsemblGRCh38hg38GRCh38
GRCh371091,461,347 - 91,534,691 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361091,451,347 - 91,524,680 (+)NCBINCBI36Build 36hg18NCBI36
Build 341091,451,346 - 91,524,682NCBI
Celera1085,208,188 - 85,281,517 (+)NCBICelera
Cytogenetic Map10q23.31NCBI
HuRef1085,095,245 - 85,168,546 (+)NCBIHuRef
CHM1_11091,743,466 - 91,816,800 (+)NCBICHM1_1
T2T-CHM13v2.01090,585,487 - 90,658,826 (+)NCBIT2T-CHM13v2.0
Kif20b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81241,840,898 - 241,896,451 (+)NCBIGRCr8
mRatBN7.21232,428,293 - 232,483,798 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1232,428,371 - 232,483,787 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1240,838,583 - 240,893,939 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01247,751,585 - 247,806,952 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01240,589,768 - 240,645,139 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01253,220,038 - 253,275,523 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1253,221,812 - 253,275,490 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01260,438,604 - 260,494,019 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41238,892,139 - 238,947,678 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11239,059,519 - 239,113,273 (+)NCBI
Celera1229,541,481 - 229,596,865 (+)NCBICelera
Cytogenetic Map1q53NCBI
Kif20b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554253,261,450 - 3,308,416 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554253,261,269 - 3,313,891 (-)NCBIChiLan1.0ChiLan1.0
KIF20B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28101,722,328 - 101,795,724 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110101,727,652 - 101,801,043 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01086,428,814 - 86,501,384 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11089,968,651 - 90,041,998 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1089,968,651 - 90,041,998 (+)Ensemblpanpan1.1panPan2
KIF20B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1284,589,691 - 4,670,335 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl284,589,434 - 4,670,164 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha284,823,170 - 4,903,772 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0284,810,376 - 4,891,065 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl284,810,112 - 4,892,667 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1284,561,023 - 4,641,665 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0284,604,117 - 4,684,585 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0284,739,788 - 4,820,432 (+)NCBIUU_Cfam_GSD_1.0
Kif20b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721342,824,545 - 42,885,126 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366014,456,724 - 4,516,135 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366014,457,142 - 4,517,693 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF20B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14101,512,814 - 101,594,696 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114101,512,685 - 101,594,703 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214110,499,040 - 110,581,524 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIF20B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1983,078,934 - 83,147,436 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl983,078,933 - 83,147,257 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604843,753,374 - 43,822,791 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kif20b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624737616,869 - 687,050 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624737616,766 - 687,132 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kif20b
2088 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:52
Count of miRNA genes:40
Interacting mature miRNAs:41
Transcripts:ENSMUST00000087341
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13506250Renmq1_mrenal mercury accumulation QTL 1 (mouse)192738559461385705Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192023431454234461Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191591260749912719Mouse
1558876W3q14_mweight 3 weeks QTL 14 (mouse)Not determined192231332653911504Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19978745343787602Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191591260749912719Mouse
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
1357568Tgct4_mtesticular germ cell tumor 4 (mouse)Not determined192777198535295381Mouse
1301639Stnn_mstriatal neuron number (mouse)Not determined193395195261420004Mouse
1301451Ath16_matherosclerosis 16 (mouse)Not determined192542691759427005Mouse
1300683Fembm7_mfemoral bone morphometry 7 (mouse)Not determined193014122461420004Mouse
4141659Pbwg20_mpostnatal body weight growth 20 (mouse)Not determined192137870555378928Mouse
4141019Tgq29_mtriglyceride QTL 29 (mouse)Not determined3459678661420004Mouse
1301942Pas13_mpulmonary adenoma susceptibility 13 (mouse)Not determined193014123161420004Mouse
10413881Moe2_mmodifier of epilepsy 2 (mouse)191492301648923138Mouse
1302004Lfp2_mlong free running period 2 (mouse)Not determined191829516252295381Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
12790634Ebm1_mEpidermolysis Bullosa modifier 1 (mouse)192498843958988439Mouse
1300856Nobq2_mNew Zealand obese QTL 2 (mouse)Not determined193089788061420004Mouse
4141138Femwf11_mfemur work to failure 11 (mouse)Not determined2814034861420004Mouse
1301410Cd8mts6_mCD8 memory T cell subset 6 (mouse)Not determined193014123161420004Mouse
4142343Moen2_mmodifier of engrailed QTL 2 (mouse)Not determined192023431454234461Mouse
1302123Tlsr8_mthymic lymphoma suppressor region 8 (mouse)Not determined192513600242388916Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
1302063Eae19_mexperimental allergic encephalomyelitis 19 (mouse)Not determined191829516252295381Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
1301741Lith2_mlithogenic gene 2 (mouse)Not determined193299215861420004Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19930571543305821Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001362434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_183046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB054030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC113244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY259532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC036147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC151061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC172148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000087341   ⟹   ENSMUSP00000084599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,899,761 - 34,953,135 (+)Ensembl
GRCm38.p6 Ensembl1934,922,361 - 34,975,735 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223776   ⟹   ENSMUSP00000152994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,899,834 - 34,909,085 (+)Ensembl
GRCm38.p6 Ensembl1934,922,434 - 34,931,685 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223907   ⟹   ENSMUSP00000153034
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,899,792 - 34,953,145 (+)Ensembl
GRCm38.p6 Ensembl1934,922,392 - 34,975,745 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223937   ⟹   ENSMUSP00000153193
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,930,292 - 34,943,511 (+)Ensembl
GRCm38.p6 Ensembl1934,952,892 - 34,966,111 (+)Ensembl
Ensembl Acc Id: ENSMUST00000224381
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,950,129 - 34,953,143 (+)Ensembl
GRCm38.p6 Ensembl1934,972,729 - 34,975,743 (+)Ensembl
Ensembl Acc Id: ENSMUST00000224603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,907,172 - 34,907,858 (+)Ensembl
GRCm38.p6 Ensembl1934,929,772 - 34,930,458 (+)Ensembl
Ensembl Acc Id: ENSMUST00000224728   ⟹   ENSMUSP00000153020
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,913,086 - 34,953,143 (+)Ensembl
GRCm38.p6 Ensembl1934,935,686 - 34,975,743 (+)Ensembl
Ensembl Acc Id: ENSMUST00000225151   ⟹   ENSMUSP00000153181
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,947,481 - 34,953,134 (+)Ensembl
GRCm38.p6 Ensembl1934,970,081 - 34,975,734 (+)Ensembl
Ensembl Acc Id: ENSMUST00000225408   ⟹   ENSMUSP00000153592
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,907,129 - 34,914,342 (+)Ensembl
GRCm38.p6 Ensembl1934,929,729 - 34,936,942 (+)Ensembl
Ensembl Acc Id: ENSMUST00000225625
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1934,952,547 - 34,953,089 (+)Ensembl
GRCm38.p6 Ensembl1934,975,147 - 34,975,689 (+)Ensembl
RefSeq Acc Id: NM_001362434   ⟹   NP_001349363
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,758 - 34,953,150 (+)NCBI
GRCm381934,922,358 - 34,975,750 (+)NCBI
Sequence:
RefSeq Acc Id: NM_183046   ⟹   NP_898867
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,758 - 34,953,150 (+)NCBI
GRCm381934,922,358 - 34,975,750 (+)NCBI
MGSCv371934,996,848 - 35,050,221 (+)RGD
Celera1935,696,320 - 35,750,429 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006527080   ⟹   XP_006527143
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,831 - 34,953,150 (+)NCBI
GRCm381934,922,434 - 34,975,750 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006527081   ⟹   XP_006527144
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,749 - 34,953,150 (+)NCBI
GRCm381934,922,348 - 34,975,750 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006527082   ⟹   XP_006527145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,735 - 34,953,150 (+)NCBI
GRCm381934,922,335 - 34,975,750 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006527084   ⟹   XP_006527147
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,768 - 34,953,150 (+)NCBI
GRCm381934,922,350 - 34,975,750 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250939   ⟹   XP_030106799
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,752 - 34,953,150 (+)NCBI
GRCm381934,922,351 - 34,975,745 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036161594   ⟹   XP_036017487
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,735 - 34,953,150 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004940144
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,735 - 34,952,961 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004940145
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,735 - 34,952,961 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004940147
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391934,899,758 - 34,951,877 (+)NCBI
Sequence:
RefSeq Acc Id: NP_898867   ⟸   NM_183046
- Peptide Label: isoform 1
- UniProtKB: Q8BLI2 (UniProtKB/Swiss-Prot),   Q80VC0 (UniProtKB/Swiss-Prot),   Q3V347 (UniProtKB/Swiss-Prot),   E9QPW5 (UniProtKB/Swiss-Prot),   Q99PT5 (UniProtKB/Swiss-Prot),   Q80WE4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006527145   ⟸   XM_006527082
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006527147   ⟸   XM_006527084
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006527143   ⟸   XM_006527080
- Peptide Label: isoform X1
- UniProtKB: Q8BLI2 (UniProtKB/Swiss-Prot),   Q80VC0 (UniProtKB/Swiss-Prot),   Q3V347 (UniProtKB/Swiss-Prot),   E9QPW5 (UniProtKB/Swiss-Prot),   Q99PT5 (UniProtKB/Swiss-Prot),   Q80WE4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006527144   ⟸   XM_006527081
- Peptide Label: isoform X1
- UniProtKB: Q8BLI2 (UniProtKB/Swiss-Prot),   Q80VC0 (UniProtKB/Swiss-Prot),   Q3V347 (UniProtKB/Swiss-Prot),   E9QPW5 (UniProtKB/Swiss-Prot),   Q99PT5 (UniProtKB/Swiss-Prot),   Q80WE4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030106799   ⟸   XM_030250939
- Peptide Label: isoform X5
RefSeq Acc Id: NP_001349363   ⟸   NM_001362434
- Peptide Label: isoform 2
- UniProtKB: B7ZWN1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000152994   ⟸   ENSMUST00000223776
Ensembl Acc Id: ENSMUSP00000153034   ⟸   ENSMUST00000223907
Ensembl Acc Id: ENSMUSP00000153193   ⟸   ENSMUST00000223937
Ensembl Acc Id: ENSMUSP00000153181   ⟸   ENSMUST00000225151
Ensembl Acc Id: ENSMUSP00000153592   ⟸   ENSMUST00000225408
Ensembl Acc Id: ENSMUSP00000084599   ⟸   ENSMUST00000087341
Ensembl Acc Id: ENSMUSP00000153020   ⟸   ENSMUST00000224728
RefSeq Acc Id: XP_036017487   ⟸   XM_036161594
- Peptide Label: isoform X3
Protein Domains
Kinesin motor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80WE4-F1-model_v2 AlphaFold Q80WE4 1-1774 view protein structure

Promoters
RGD ID:13679344
Promoter ID:EPDNEW_M23820
Type:initiation region
Name:Kif20b_1
Description:Mus musculus kinesin family member 20B , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M23821  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381934,922,361 - 34,922,421EPDNEW
RGD ID:13679342
Promoter ID:EPDNEW_M23821
Type:single initiation site
Name:Kif20b_2
Description:Mus musculus kinesin family member 20B , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M23820  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381934,932,385 - 34,932,445EPDNEW
RGD ID:6830240
Promoter ID:MM_KWN:26915
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:NM_183046,   UC008HGX.1,   UC008HGY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361934,996,504 - 34,997,004 (+)MPROMDB
RGD ID:6830235
Promoter ID:MM_KWN:26918
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Spleen
Transcripts:UC008HHB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361935,011,686 - 35,012,186 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2444576 AgrOrtholog
Ensembl Genes ENSMUSG00000024795 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000087341 ENTREZGENE
  ENSMUST00000087341.7 UniProtKB/Swiss-Prot
  ENSMUST00000223776.2 UniProtKB/TrEMBL
  ENSMUST00000223907 ENTREZGENE
  ENSMUST00000223907.2 UniProtKB/Swiss-Prot
  ENSMUST00000223937.2 UniProtKB/TrEMBL
  ENSMUST00000224728.2 UniProtKB/TrEMBL
  ENSMUST00000225151.2 UniProtKB/TrEMBL
  ENSMUST00000225408.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.850.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro KIF11-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:240641 UniProtKB/Swiss-Prot
MGD MGI:2444576 ENTREZGENE
NCBI Gene 240641 ENTREZGENE
PANTHER KINESIN MOTOR DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KINESIN-LIKE PROTEIN KIF11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KINESIN-LIKE PROTEIN KIF20B UniProtKB/TrEMBL
  KINESIN-RELATED UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Kif20b PhenoGen
PRINTS KINESINHEAVY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KINESIN_MOTOR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART KISc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A286YCI2_MOUSE UniProtKB/TrEMBL
  A0A286YCJ8_MOUSE UniProtKB/TrEMBL
  A0A286YCY2_MOUSE UniProtKB/TrEMBL
  A0A286YCY3_MOUSE UniProtKB/TrEMBL
  A0A286YE94_MOUSE UniProtKB/TrEMBL
  B7ZWN1 ENTREZGENE, UniProtKB/TrEMBL
  E9QPW5 ENTREZGENE
  KI20B_MOUSE UniProtKB/Swiss-Prot
  Q3V347 ENTREZGENE
  Q80VC0 ENTREZGENE
  Q80WE4 ENTREZGENE
  Q8BLI2 ENTREZGENE
  Q99PT5 ENTREZGENE
UniProt Secondary E9QPW5 UniProtKB/Swiss-Prot
  Q3V347 UniProtKB/Swiss-Prot
  Q80VC0 UniProtKB/Swiss-Prot
  Q8BLI2 UniProtKB/Swiss-Prot
  Q99PT5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-05-05 Kif20b  kinesin family member 20B  Kif20b  kinesin family member 20B  Data merged from RGD:1616453 737654 PROVISIONAL