USP31 (ubiquitin specific peptidase 31) - Rat Genome Database

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Gene: USP31 (ubiquitin specific peptidase 31) Homo sapiens
Analyze
Symbol: USP31
Name: ubiquitin specific peptidase 31
RGD ID: 1317813
HGNC Page HGNC:20060
Description: Enables cysteine-type deubiquitinase activity. Predicted to be involved in protein deubiquitination and proteolysis. Located in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: deubiquitinating enzyme 31; KIAA1203; RP11-20G6.3; ubiquitin carboxyl-terminal hydrolase 31; ubiquitin specific protease 31; ubiquitin specific proteinase 31; ubiquitin thioesterase 31; ubiquitin thiolesterase 31; ubiquitin-specific-processing protease 31
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381623,061,406 - 23,149,452 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1623,061,406 - 23,149,452 (-)EnsemblGRCh38hg38GRCh38
GRCh371623,072,727 - 23,160,773 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361622,980,229 - 23,068,092 (-)NCBINCBI36Build 36hg18NCBI36
Build 341622,986,867 - 23,068,092NCBI
Celera1621,850,471 - 21,938,333 (-)NCBICelera
Cytogenetic Map16p12.2NCBI
HuRef1621,162,233 - 21,249,604 (-)NCBIHuRef
CHM1_11624,082,753 - 24,170,606 (-)NCBICHM1_1
T2T-CHM13v2.01623,337,392 - 23,425,432 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP31Humansensorineural hearing loss  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Sensorineural hearing loss disorderClinVarPMID:25741868

1 to 20 of 64 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP31Human(+)-schisandrin B multiple interactionsISOUsp31 (Rattus norvegicus)6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of USP31 mRNA]CTDPMID:31150632
USP31Human17alpha-ethynylestradiol increases expressionISOUsp31 (Rattus norvegicus)6480464Ethinyl Estradiol results in increased expression of USP31 mRNACTDPMID:29097150
USP31Human17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of USP31 mRNACTDPMID:31614463
USP31Human2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOUsp31 (Mus musculus)6480464[2 more ...CTDPMID:25510870
USP31Human2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOUsp31 (Mus musculus)6480464[2 more ...CTDPMID:25510870
USP31Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOUsp31 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of USP31 mRNACTDPMID:32109520 and PMID:33387578
USP31Human4,4'-sulfonyldiphenol decreases expressionISOUsp31 (Mus musculus)6480464bisphenol S results in decreased expression of USP31 mRNACTDPMID:39298647
USP31Human6-propyl-2-thiouracil decreases expressionISOUsp31 (Rattus norvegicus)6480464Propylthiouracil results in decreased expression of USP31 mRNACTDPMID:24780913
USP31Humanacetamide decreases expressionISOUsp31 (Rattus norvegicus)6480464acetamide results in decreased expression of USP31 mRNACTDPMID:31881176
USP31Humanaflatoxin B1 increases expressionISOUsp31 (Mus musculus)6480464Aflatoxin B1 results in increased expression of USP31 mRNACTDPMID:19770486
USP31Humanaflatoxin B1 decreases expressionISOUsp31 (Rattus norvegicus)6480464Aflatoxin B1 results in decreased expression of USP31 mRNACTDPMID:33354967
USP31Humanaflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of USP31 mRNACTDPMID:27153756
USP31Humanamphetamine decreases expressionISOUsp31 (Rattus norvegicus)6480464Amphetamine results in decreased expression of USP31 mRNACTDPMID:30779732
USP31Humanantirheumatic drug increases expressionEXP 6480464Antirheumatic Agents results in increased expression of USP31 mRNACTDPMID:24449571
USP31Humanbenzo[a]pyrene decreases expressionISOUsp31 (Mus musculus)6480464Benzo(a)pyrene results in decreased expression of USP31 mRNACTDPMID:19770486
USP31Humanbenzo[a]pyrene diol epoxide I decreases expressionEXP 64804647 more ...CTDPMID:20018196
USP31Humanbeta-lapachone increases expressionEXP 6480464beta-lapachone results in increased expression of USP31 mRNACTDPMID:38218311
USP31Humanbisphenol A decreases expressionISOUsp31 (Rattus norvegicus)6480464bisphenol A results in decreased expression of USP31 mRNACTDPMID:25181051
USP31Humanbisphenol A increases expressionISOUsp31 (Rattus norvegicus)6480464bisphenol A results in increased expression of USP31 mRNACTDPMID:33296240
USP31Humanbutanal decreases expressionEXP 6480464butyraldehyde results in decreased expression of USP31 mRNACTDPMID:26079696

1 to 20 of 64 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP31Humanprotein deubiquitination involved_inIEAInterPro:IPR001394150520179 InterProGO_REF:0000002
USP31Humanproteolysis involved_inIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP31Humannucleus located_inIDA 150520179 PMID:16214042FlyBasePMID:16214042

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP31Humancysteine-type deubiquitinase activity enablesIEAEC:3.4.19.12150520179 UniProtGO_REF:0000003
USP31Humancysteine-type deubiquitinase activity enablesIEAInterPro:IPR001394 and InterPro:IPR018200150520179 InterProGO_REF:0000002
USP31Humancysteine-type deubiquitinase activity enablesIDA 150520179 PMID:16214042FlyBasePMID:16214042
USP31Humancysteine-type peptidase activity enablesIEAUniProtKB-KW:KW-0788150520179 UniProtGO_REF:0000043
USP31Humancysteine-type peptidase activity enablesIEAARBA:ARBA00027409150520179 UniProtGO_REF:0000117
USP31Humanhydrolase activity enablesIEAUniProtKB-KW:KW-0378150520179 UniProtGO_REF:0000043
USP31Humanpeptidase activity enablesIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
USP31HumanSensorineural hearing impairment  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Sensorineural hearing lossClinVarPMID:25741868

#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10574462   PMID:12838346   PMID:14702039   PMID:14715245   PMID:16214042   PMID:18029348   PMID:27880917   PMID:28065597   PMID:29507755   PMID:29576527   PMID:33957083   PMID:34079125  
PMID:34184746   PMID:34349018   PMID:35337019   PMID:35944360   PMID:36931259   PMID:36976175   PMID:37011699   PMID:37699648  



USP31
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381623,061,406 - 23,149,452 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1623,061,406 - 23,149,452 (-)EnsemblGRCh38hg38GRCh38
GRCh371623,072,727 - 23,160,773 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361622,980,229 - 23,068,092 (-)NCBINCBI36Build 36hg18NCBI36
Build 341622,986,867 - 23,068,092NCBI
Celera1621,850,471 - 21,938,333 (-)NCBICelera
Cytogenetic Map16p12.2NCBI
HuRef1621,162,233 - 21,249,604 (-)NCBIHuRef
CHM1_11624,082,753 - 24,170,606 (-)NCBICHM1_1
T2T-CHM13v2.01623,337,392 - 23,425,432 (-)NCBIT2T-CHM13v2.0
Usp31
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397121,241,244 - 121,306,683 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7121,241,244 - 121,306,476 (-)EnsemblGRCm39 Ensembl
GRCm387121,642,021 - 121,707,461 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7121,642,021 - 121,707,253 (-)EnsemblGRCm38mm10GRCm38
MGSCv377128,785,535 - 128,850,767 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367121,433,169 - 121,498,401 (-)NCBIMGSCv36mm8
Celera7121,548,948 - 121,614,109 (-)NCBICelera
Cytogenetic Map7F2NCBI
cM Map765.07NCBI
Usp31
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81185,642,631 - 185,709,499 (-)NCBIGRCr8
mRatBN7.21176,211,334 - 176,278,183 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1176,215,889 - 176,278,355 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1184,545,248 - 184,612,096 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01191,731,193 - 191,798,044 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01184,416,252 - 184,483,082 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01191,615,146 - 191,651,628 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1191,615,146 - 191,676,915 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01198,528,190 - 198,594,190 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41180,465,513 - 180,502,558 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11180,606,401 - 180,668,196 (-)NCBI
Celera1173,934,202 - 173,970,553 (-)NCBICelera
Cytogenetic Map1q36NCBI
Usp31
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554931,663,268 - 1,702,386 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554931,663,268 - 1,724,522 (-)NCBIChiLan1.0ChiLan1.0
USP31
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21824,472,643 - 24,560,899 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11628,994,382 - 29,082,626 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01614,961,086 - 15,049,186 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11623,314,587 - 23,402,895 (-)NCBIpanpan1.1PanPan1.1panPan2
USP31
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1622,622,099 - 22,688,398 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl622,622,099 - 22,690,121 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha624,189,317 - 24,256,154 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0622,766,189 - 22,832,511 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl622,766,189 - 22,832,472 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1622,568,730 - 22,639,836 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0622,472,006 - 22,538,080 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0622,866,570 - 22,937,685 (+)NCBIUU_Cfam_GSD_1.0
Usp31
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344119,740,300 - 119,778,164 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365017,844,705 - 7,876,054 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365017,844,685 - 7,876,128 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
USP31
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl323,035,426 - 23,116,007 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1323,035,543 - 23,122,134 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2323,604,741 - 23,617,577 (-)NCBISscrofa10.2Sscrofa10.2susScr3
USP31
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1520,757,771 - 20,861,076 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl520,764,359 - 20,860,502 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660689,001,921 - 9,103,612 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Usp31
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247828,336,439 - 8,403,342 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247828,330,034 - 8,403,357 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in USP31
128 total Variants

1 to 10 of 167 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 16p13.11-12.1(chr16:14954894-28306843)x3 copy number gain See cases [RCV000051828] Chr16:14954894..28306843 [GRCh38]
Chr16:15048751..28318164 [GRCh37]
Chr16:14956252..28225665 [NCBI36]
Chr16:16p13.11-12.1
pathogenic
GRCh38/hg38 16p12.2-11.2(chr16:21463739-29249579)x3 copy number gain See cases [RCV000051829] Chr16:21463739..29249579 [GRCh38]
Chr16:21475060..29260900 [GRCh37]
Chr16:21382561..29168401 [NCBI36]
Chr16:16p12.2-11.2
pathogenic
NM_020718.3(USP31):c.3536C>T (p.Pro1179Leu) single nucleotide variant Malignant melanoma [RCV000063002] Chr16:23068569 [GRCh38]
Chr16:23079890 [GRCh37]
Chr16:22987391 [NCBI36]
Chr16:16p12.2
not provided
GRCh38/hg38 16p12.2-11.2(chr16:21602183-29314373)x3 copy number gain See cases [RCV000051842] Chr16:21602183..29314373 [GRCh38]
Chr16:21613504..29325694 [GRCh37]
Chr16:21521005..29233195 [NCBI36]
Chr16:16p12.2-11.2
pathogenic
GRCh38/hg38 16p12.2-11.2(chr16:23047969-30632245)x3 copy number gain See cases [RCV000052401] Chr16:23047969..30632245 [GRCh38]
Chr16:23059290..30643566 [GRCh37]
Chr16:22966791..30551067 [NCBI36]
Chr16:16p12.2-11.2
pathogenic
GRCh38/hg38 16p12.2-12.1(chr16:21600992-28323344)x1 copy number loss See cases [RCV000052519] Chr16:21600992..28323344 [GRCh38]
Chr16:21612313..28334665 [GRCh37]
Chr16:21519814..28242166 [NCBI36]
Chr16:16p12.2-12.1
pathogenic
GRCh38/hg38 16p12.2(chr16:22755932-23546240)x3 copy number gain See cases [RCV000053859] Chr16:22755932..23546240 [GRCh38]
Chr16:22767253..23557561 [GRCh37]
Chr16:22674754..23465062 [NCBI36]
Chr16:16p12.2
uncertain significance
NM_020718.3(USP31):c.2523C>T (p.Val841=) single nucleotide variant Malignant melanoma [RCV000071039] Chr16:23069582 [GRCh38]
Chr16:23080903 [GRCh37]
Chr16:22988404 [NCBI36]
Chr16:16p12.2
not provided
NM_020718.3(USP31):c.1302T>C (p.Pro434=) single nucleotide variant Malignant melanoma [RCV000071040] Chr16:23090737 [GRCh38]
Chr16:23102058 [GRCh37]
Chr16:23009559 [NCBI36]
Chr16:16p12.2
not provided
NM_020718.3(USP31):c.937C>T (p.Pro313Ser) single nucleotide variant Malignant melanoma [RCV000071041] Chr16:23106229 [GRCh38]
Chr16:23117550 [GRCh37]
Chr16:23025051 [NCBI36]
Chr16:16p12.2
not provided
1 to 10 of 167 rows

Predicted Target Of
Summary Value
Count of predictions:2721
Count of miRNA genes:1189
Interacting mature miRNAs:1477
Transcripts:ENST00000219689, ENST00000381162, ENST00000563525, ENST00000567975
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597157574GWAS1253648_Hlifestyle measurement, depressive symptom measurement QTL GWAS1253648 (human)0.0000003lifestyle measurement, depressive symptom measurement162314398923143990Human
597225265GWAS1321339_Hchronotype measurement QTL GWAS1321339 (human)5e-09sleep behavior trait (VT:0001501)162311287223112873Human

SHGC-60522  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371623,149,348 - 23,149,443UniSTSGRCh37
Build 361623,056,849 - 23,056,944RGDNCBI36
Celera1621,927,090 - 21,927,185RGD
Cytogenetic Map16p12.2UniSTS
HuRef1621,238,867 - 21,238,962UniSTS
TNG Radiation Hybrid Map1613503.0UniSTS
RH35845  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371623,075,579 - 23,075,702UniSTSGRCh37
Build 361622,983,080 - 22,983,203RGDNCBI36
Celera1621,853,322 - 21,853,445RGD
Cytogenetic Map16p12.2UniSTS
HuRef1621,165,084 - 21,165,207UniSTS
GeneMap99-GB4 RH Map16192.95UniSTS
NCBI RH Map16221.2UniSTS
D16S2823  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371623,151,875 - 23,151,993UniSTSGRCh37
Build 361623,059,376 - 23,059,494RGDNCBI36
Celera1621,929,617 - 21,929,735RGD
Cytogenetic Map16p12.2UniSTS
HuRef1621,241,394 - 21,241,512UniSTS
SHGC-61085  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371623,075,501 - 23,075,722UniSTSGRCh37
Build 361622,983,002 - 22,983,223RGDNCBI36
Celera1621,853,244 - 21,853,465RGD
Cytogenetic Map16p12.2UniSTS
HuRef1621,165,006 - 21,165,227UniSTS
GeneMap99-GB4 RH Map16191.13UniSTS
NCBI RH Map16221.2UniSTS
SHGC-35920  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371623,077,043 - 23,077,143UniSTSGRCh37
Build 361622,984,544 - 22,984,644RGDNCBI36
Celera1621,854,786 - 21,854,886RGD
Cytogenetic Map16p12.2UniSTS
HuRef1621,166,548 - 21,166,648UniSTS
TNG Radiation Hybrid Map1613462.0UniSTS
GeneMap99-GB4 RH Map16191.23UniSTS
Whitehead-RH Map16108.2UniSTS
GeneMap99-G3 RH Map161203.0UniSTS
STS-W67951  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371623,072,773 - 23,073,012UniSTSGRCh37
Build 361622,980,274 - 22,980,513RGDNCBI36
Celera1621,850,516 - 21,850,755RGD
Cytogenetic Map16p12.2UniSTS
HuRef1621,162,278 - 21,162,517UniSTS
GeneMap99-GB4 RH Map16192.95UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1948 465 2270 7303 6469 53 3734 1 852 1744 1617 175 1


1 to 24 of 24 rows
RefSeq Transcripts NM_001387221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_170599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047434389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054313530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054313531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054313532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054313533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001751957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB033029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC099482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC127459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ586135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK092790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK126447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK126752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM842261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX648357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 24 of 24 rows

Ensembl Acc Id: ENST00000219689   ⟹   ENSP00000219689
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1623,061,406 - 23,149,452 (-)Ensembl
Ensembl Acc Id: ENST00000563525   ⟹   ENSP00000481339
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1623,078,979 - 23,087,130 (-)Ensembl
Ensembl Acc Id: ENST00000567975   ⟹   ENSP00000461621
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1623,067,979 - 23,072,548 (-)Ensembl
RefSeq Acc Id: NM_001387221   ⟹   NP_001374150
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381623,061,406 - 23,149,452 (-)NCBI
T2T-CHM13v2.01623,337,392 - 23,425,432 (-)NCBI
Sequence:
RefSeq Acc Id: NM_020718   ⟹   NP_065769
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381623,061,406 - 23,149,452 (-)NCBI
GRCh371623,072,727 - 23,160,591 (-)NCBI
Build 361622,980,229 - 23,068,092 (-)NCBI Archive
Celera1621,850,471 - 21,938,333 (-)RGD
HuRef1621,162,233 - 21,249,604 (-)ENTREZGENE
CHM1_11624,082,753 - 24,170,606 (-)NCBI
T2T-CHM13v2.01623,337,392 - 23,425,432 (-)NCBI
Sequence:
RefSeq Acc Id: NR_170599
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381623,061,406 - 23,149,452 (-)NCBI
T2T-CHM13v2.01623,337,392 - 23,425,432 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017023497   ⟹   XP_016878986
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381623,061,406 - 23,115,752 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017023498   ⟹   XP_016878987
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381623,061,406 - 23,107,414 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017023499   ⟹   XP_016878988
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381623,061,406 - 23,106,302 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047434389   ⟹   XP_047290345
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381623,073,787 - 23,149,452 (-)NCBI
RefSeq Acc Id: XM_054313530   ⟹   XP_054169505
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01623,337,392 - 23,391,736 (-)NCBI
RefSeq Acc Id: XM_054313531   ⟹   XP_054169506
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01623,337,392 - 23,383,399 (-)NCBI
RefSeq Acc Id: XM_054313532   ⟹   XP_054169507
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01623,337,392 - 23,382,287 (-)NCBI
RefSeq Acc Id: XM_054313533   ⟹   XP_054169508
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01623,349,842 - 23,425,432 (-)NCBI
1 to 5 of 13 rows
1 to 5 of 13 rows
RefSeq Acc Id: NP_065769   ⟸   NM_020718
- Peptide Label: isoform 1
- UniProtKB: Q6ZTN2 (UniProtKB/Swiss-Prot),   Q6ZTC0 (UniProtKB/Swiss-Prot),   Q6AW97 (UniProtKB/Swiss-Prot),   Q9ULL7 (UniProtKB/Swiss-Prot),   Q70CQ4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016878986   ⟸   XM_017023497
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016878987   ⟸   XM_017023498
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016878988   ⟸   XM_017023499
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSP00000219689   ⟸   ENST00000219689
USP

Name Modeler Protein Id AA Range Protein Structure
AF-Q70CQ4-F1-model_v2 AlphaFold Q70CQ4 1-1352 view protein structure

RGD ID:6793588
Promoter ID:HG_KWN:23299
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000211607
Position:
Human AssemblyChrPosition (strand)Source
Build 361623,067,496 - 23,068,517 (-)MPROMDB


1 to 36 of 36 rows
Database
Acc Id
Source(s)
COSMIC USP31 COSMIC
Ensembl Genes ENSG00000103404 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000219689 ENTREZGENE
  ENST00000219689.12 UniProtKB/Swiss-Prot
Gene3D-CATH Cysteine proteinases UniProtKB/Swiss-Prot
GTEx ENSG00000103404 GTEx
HGNC ID HGNC:20060 ENTREZGENE
Human Proteome Map USP31 Human Proteome Map
InterPro Papain-like_cys_pep_sf UniProtKB/Swiss-Prot
  Peptidase_C19_UCH UniProtKB/Swiss-Prot
  Ub_carboxyl-term_hydrolase UniProtKB/Swiss-Prot
  USP_CS UniProtKB/Swiss-Prot
  USP_dom UniProtKB/Swiss-Prot
KEGG Report hsa:57478 UniProtKB/Swiss-Prot
NCBI Gene 57478 ENTREZGENE
OMIM 619536 OMIM
PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE UniProtKB/Swiss-Prot
  UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 31 UniProtKB/Swiss-Prot
Pfam UCH UniProtKB/Swiss-Prot
PharmGKB PA164742780 PharmGKB
PROSITE USP_1 UniProtKB/Swiss-Prot
  USP_2 UniProtKB/Swiss-Prot
  USP_3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54001 UniProtKB/Swiss-Prot
UniProt A0A087WXV9_HUMAN UniProtKB/TrEMBL
  I3L4X5_HUMAN UniProtKB/TrEMBL
  Q6AW97 ENTREZGENE
  Q6ZTC0 ENTREZGENE
  Q6ZTN2 ENTREZGENE
  Q70CQ4 ENTREZGENE
  Q9ULL7 ENTREZGENE
  UBP31_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary Q6AW97 UniProtKB/Swiss-Prot
  Q6ZTC0 UniProtKB/Swiss-Prot
  Q6ZTN2 UniProtKB/Swiss-Prot
  Q9ULL7 UniProtKB/Swiss-Prot
1 to 36 of 36 rows