Ebpl (emopamil binding protein-like)

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Gene: Ebpl (emopamil binding protein-like) Mus musculus

Analyze

Symbol:

Ebpl

Name:

emopamil binding protein-like

RGD ID:

1312087

MGI Page

MGI

Description:

Predicted to enable cholestenol delta-isomerase activity. Predicted to be involved in sterol metabolic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum. Is expressed in central nervous system; retina; retina inner nuclear layer; and retina outer nuclear layer. Orthologous to human EBPL (EBP like).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

5730442K12Rik; EBRP; emopamil binding related protein, delta8-delta7 sterol isomerase related protein; emopamil-binding protein-like; emopamil-binding-related protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EBPL (EBP like)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Ebpl (EBP like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ebpl (EBP like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	EBPL (EBP like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EBPL (EBP like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ebpl (EBP like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	EBPL (EBP like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	EBPL (EBP like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ebpl (EBP like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Ebpl (EBP like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	EBPL (EBP like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ebpl (EBP like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	ebpl	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	61,577,212 - 61,597,894 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	61,569,191 - 61,597,888 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	61,339,763 - 61,360,445 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	61,331,742 - 61,360,439 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	61,958,600 - 61,979,282 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	60,294,860 - 60,314,549 (-)	NCBI		MGSCv36	mm8
Celera	14	59,106,822 - 59,127,515 (-)	NCBI		Celera
Cytogenetic Map	14	D1	NCBI
cM Map	14	32.72	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 13q14 deletion syndrome (ISO)

intellectual disability (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dimethylhydrazine (EXP)

1,3-dinitrobenzene (ISO)

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

6-propyl-2-thiouracil (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (EXP)

benzo[a]pyrene (EXP,ISO)

bisphenol A (ISO)

caffeine (ISO)

carbon nanotube (EXP)

CGP 52608 (ISO)

choline (EXP)

cisplatin (ISO)

cyclosporin A (EXP)

disodium selenite (ISO)

entinostat (ISO)

flutamide (ISO)

folic acid (EXP)

formaldehyde (ISO)

gallic acid (ISO)

inulin (EXP)

ketamine (ISO)

L-methionine (EXP)

lead diacetate (ISO)

methoxyacetic acid (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

Monobutylphthalate (ISO)

N-nitrosodiethylamine (ISO)

nefazodone (ISO)

nimesulide (ISO)

paracetamol (EXP,ISO)

pentachlorophenol (EXP)

perfluorooctane-1-sulfonic acid (EXP)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

phenytoin (ISO)

pirinixic acid (EXP)

sodium arsenite (ISO)

temozolomide (ISO)

tetrachloromethane (EXP)

thiram (ISO)

titanium dioxide (EXP)

trichloroethene (ISO)

triphenyl phosphate (ISO)

tungsten (EXP)

urethane (ISO)

valdecoxib (ISO)

valproic acid (ISO)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

sterol metabolic process (IEA)

Cellular Component

endoplasmic reticulum (IBA,ISO)

endoplasmic reticulum membrane (IEA)

Molecular Function

cholestenol delta-isomerase activity (IEA)

molecular_function (ND)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:12760743	PMID:14610273	PMID:15226823	PMID:15489334	PMID:16141072	PMID:16141073	PMID:18809582
PMID:21267068	PMID:21873635	PMID:26272612

Genomics

Comparative Map Data

Ebpl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	61,577,212 - 61,597,894 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	61,569,191 - 61,597,888 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	61,339,763 - 61,360,445 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	61,331,742 - 61,360,439 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	61,958,600 - 61,979,282 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	60,294,860 - 60,314,549 (-)	NCBI		MGSCv36	mm8
Celera	14	59,106,822 - 59,127,515 (-)	NCBI		Celera
Cytogenetic Map	14	D1	NCBI
cM Map	14	32.72	NCBI

EBPL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	49,660,674 - 49,691,487 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	49,660,674 - 49,691,486 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	50,234,810 - 50,265,623 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	49,132,863 - 49,163,612 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	13	49,132,863 - 49,163,612	NCBI
Celera	13	31,289,746 - 31,320,576 (-)	NCBI		Celera
Cytogenetic Map	13	q14.2	NCBI
HuRef	13	31,028,176 - 31,058,957 (-)	NCBI		HuRef
CHM1_1	13	50,202,353 - 50,233,179 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	13	48,879,582 - 48,910,398 (-)	NCBI		T2T-CHM13v2.0

Ebpl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	39,684,140 - 39,707,537 (-)	NCBI		GRCr8
mRatBN7.2	15	35,508,074 - 35,531,472 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	35,508,074 - 35,531,472 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	37,372,859 - 37,396,078 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	38,523,505 - 38,546,724 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	36,968,764 - 36,992,161 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	41,668,119 - 41,691,518 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	41,668,119 - 41,691,518 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	45,472,241 - 45,495,631 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	40,484,464 - 40,506,451 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	40,500,163 - 40,522,151 (-)	NCBI
Celera	15	35,205,464 - 35,228,861 (-)	NCBI		Celera
Cytogenetic Map	15	p12	NCBI

Ebpl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	3,112,134 - 3,121,780 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	3,114,160 - 3,122,448 (-)	NCBI	ChiLan1.0	ChiLan1.0

EBPL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	51,074,227 - 51,130,358 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	49,751,192 - 49,782,032 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	30,799,832 - 30,830,670 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	49,548,230 - 49,578,820 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	49,548,230 - 49,578,820 (-)	Ensembl	panpan1.1		panPan2

EBPL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	2,116,588 - 2,137,935 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	22	2,116,131 - 2,182,633 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	2,145,655 - 2,166,752 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	2,106,939 - 2,128,685 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	22	2,106,435 - 2,173,674 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	22	2,016,192 - 2,037,355 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	2,065,607 - 2,086,720 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	2,083,831 - 2,104,999 (+)	NCBI		UU_Cfam_GSD_1.0

Ebpl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	159,222,363 - 159,247,403 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936565	2,706,788 - 2,731,453 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936565	2,706,788 - 2,731,453 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EBPL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	18,040,011 - 18,072,633 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	18,039,978 - 18,150,729 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	18,297,518 - 18,444,593 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EBPL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	27,576,087 - 27,606,770 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	27,576,329 - 27,606,684 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666057	16,276,627 - 16,307,505 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ebpl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624748	4,967,698 - 5,000,728 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624748	4,967,611 - 5,000,156 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ebpl
452 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	437
Count of miRNA genes:	328
Interacting mature miRNAs:	371
Transcripts:	ENSMUST00000022494
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
14695040	Ifbl5_m	interfrontal bone length 5 (mouse)					14	60960823	62006713	Mouse
1357589	Kdnw2_m	kidney weight 2 (mouse)			Not determined		14	20887473	121269804	Mouse
1300625	Cosz2_m	cocaine seizure 2 (mouse)			Not determined		14	35045797	68785736	Mouse
1301777	Bglq15_m	body growth late QTL 15 (mouse)			Not determined		14	42962416	76962593	Mouse
1301489	Lbm10_m	lean body mass 10 (mouse)			Not determined		14	53761296	87761529	Mouse
1357527	Epfpq1_m	epididymal fat percentage QTL 1 (mouse)			Not determined		14	21062450	71885801	Mouse
1301424	Skull21_m	skull morphology 21 (mouse)			Not determined		14	42962416	76962593	Mouse
4142364	Pbwg18_m	postnatal body weight growth 18 (mouse)			Not determined		14	52281984	86282125	Mouse
14695043	Ifbw4_m	interfrontal bone width 4 (mouse)					14	60960823	62006713	Mouse
4141400	Nilac8_m	nicotine induced locomotor activity 8 (mouse)			Not determined		14	43065847	77066045	Mouse
10043889	Cia52_m	collagen induced arthritis QTL 52 (mouse)			Not determined		14	56082381	90082509	Mouse
27226774	Tibl15_m	tibia length 15, 10 week (mouse)					14	30321957	87937436	Mouse
1301562	Hwq1_m	heart weight quantitative locus 1 (mouse)			Not determined		14	56546745	90546941	Mouse
1357565	wrmod1_m	wobbler modifier 1 (mouse)			Not determined		14	58179640	101859473	Mouse
4142419	Tgq26_m	triglyceride QTL 26 (mouse)			Not determined			40337319	74337319	Mouse
1300605	El5_m	epilepsy 5 (mouse)			Not determined		14	49455425	83455556	Mouse
11039527	Ccc2_m	colitis susceptibility in the Collaborative Cross 2 (mouse)					14	59918612	94138217	Mouse
1301091	Bbaa21_m	B.burgdorferi-associated arthritis 21 (mouse)			Not determined		14	43065847	77066045	Mouse
12880432	Fgf23lq3_m	FGF23 serum level QTL 3 (mouse)					14	53937440	87937440	Mouse
1300998	Cia17_m	collagen induced arthritis 17 (mouse)			Not determined		14	30335250	64335381	Mouse
10043887	Cia50_m	collagen induced arthritis QTL 50 (mouse)			Not determined		14	37430185	71430320	Mouse
1300805	Mors3_m	modifier of obesity related sterility 3 (mouse)			Not determined		14	43037270	77037418	Mouse
10043886	Cia49_m	collagen induced arthritis QTL 49 (mouse)			Not determined		14	29996994	63997133	Mouse
1300909	Ath13_m	atherosclerosis 13 (mouse)			Not determined		14	30335250	64335381	Mouse

Markers in Region

UniSTS:237202

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	14	61,341,058 - 61,341,271	UniSTS	GRCm38
MGSCv37	14	61,959,895 - 61,960,108	UniSTS	GRCm37
Celera	14	59,108,118 - 59,108,331	UniSTS
Cytogenetic Map	14	D1	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC154435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF243434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK011237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK019140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK019963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK032534	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK044618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK163371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC027422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY349880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000022494 ⟹ ENSMUSP00000022494

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	61,569,191 - 61,597,888 (-)	Ensembl
GRCm38.p6 Ensembl	14	61,331,742 - 61,360,439 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000223560

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	61,577,214 - 61,597,769 (-)	Ensembl
GRCm38.p6 Ensembl	14	61,339,765 - 61,360,320 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000225112

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	61,581,300 - 61,597,857 (-)	Ensembl
GRCm38.p6 Ensembl	14	61,343,851 - 61,360,408 (-)	Ensembl

RefSeq Acc Id:

NM_026598 ⟹ NP_080874

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	61,577,212 - 61,597,894 (-)	NCBI
GRCm38	14	61,339,763 - 61,360,445 (-)	ENTREZGENE
MGSCv37	14	61,958,600 - 61,979,282 (-)	RGD
Celera	14	59,106,822 - 59,127,515 (-)	RGD
cM Map	14		ENTREZGENE

Sequence:

show sequence

GCCCACAAGAGGCTAGCTCGCAGGCTCCCCGCTCGCCGTGGTGTGCTGTGGAGCCATGGGGGAG
CATTGGGCGCTGGGCCCGGAGGCAGGCTCCTCCTTGCTGTTGTGCTCAGCGCTGCTGGCCGTAG
GGTGCGCGCTGGGCCTGCGCCTGGGCCGCGGGCGGAGCGCGGTGGAGCGTTGGGTGCTCGCCTG
GCTCTGCTACGACTCACTGGTTCACTTTGTGCTGGAAGGCGCTTTTGTCTACTTGTCTATAGTA
GGAAATGTTGCAGATTCCCAAGGCTTGATTGCATCTTTATGGAAAGAGTATGGCAAGGCTGACA
CAAGATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGGAAATCCTGACTGTTGTCCTAGATGG
GCTCCTGGCGTTGGTCCTCATTTATGCCATAGTCAAGGAGAAATATTACAGGCACTTTGTACAG
ATTGTCCTGTGCGTGTGTGAGCTCTATGGCTGCTGGATGACCTTCTTCCCCGAGTGGCTCGTCG
GAAGCCCCAGCCTCAACACCAGCAGCTGGCTCTACCTCTGGGTCTATTTGGTGTTTTTTAATGG
CCTGTGGGTTCTGATCCCAGGCCTGCTGCTGTGGCAGTCATGGGTAGAACTGAAGAAGAGAGAT
TCCCAAGAGGCTAATTTAGCGAAGAAGCATAAATAAGTTCTCAGGGCAACCCATTCTGACGATC
TGCTTTCCGAGTCAGAATTGACCAGACATTCCGATCTGTGCTCCTTTTTTACAGTGTTTTGAAG
CGGCCATTACAGATGGGCTGGAAGGGGGCAAACTTGGCTGTTTGTTTTTGGTTCTTTGATTAAA
TGATGATATGAAGAGAACTTGGGGTGTGACTTAGTAGTGTTGTGCTTGTCTAGCATTCACAAGG
CCCTGAATTGTTCCCTTAACACGACTAGGGGGTGCTGAGTACGTTCTCACCTGTCACAGATCAT
ATTTAATGAGACGCTCAGTCATGGCTGGCAGGCTAGTTATGCCGTGTTAATAAGTGAGTGTCAA
AGATACTGTAAGGAGTAGCATCAATGTTTACTCCAAAAAAAAAAAACCCAAAAAACAACAAAAA
TCAAAACCCTTTTTGCTTCAGCTTTTATTCTTCTCTGTGGTCTCGGGGTTAGTGACGGAAACCA
AAAGCAAAAGGAGTTGGTTCTGTGTTATGCCTACAAACTTCAAATTGCTTCAAATTTGTGTGCC
CAACAGAGAACGATAGTGGTAATCTGGAGTAGTGGCGTCCAGGTGTACTTGGGAAGCTGAGGCC
GGTGGGGGGCTTGAGGCTCCTTGGGGCGATATTGTAATATTCATTTGAAAGAAAGAGGCAGAGG
AGGGAGACTCGATGTAAGGGGCAGAGGGTGGGACTGTGGCAACACACAAGAACCAAAAAAATGT
GGTAAATCTTAACAGTACAACTATAAGATAAATTCCAGAAGATTCCATGAAGTGCAGTTTGTGC
CTTAACAGTCTGGGTGGCTGAGGAGGGGGGGCGCAAGCTTGGTACAGAATCTGTACCCAGATGG
GGCAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCATGGTTCTCTTACAGG
TGGGAGAGGGTACTCACAATACGACTTAACCCATCCCTCTGCTCAGGAGAGCACCCACACCTGG
ACCCACGCCCGCTTCGTGGTACTGGGCACTGGAGCCAGGCCGCTCACTCTTTGCCAGTCTGGCT
GCTGGTCCAGTTTAGGTCTCTCTTCCCCTTCATCTCTTATTCTTGGTCGTTTTGTTAAACGTAT
GAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCC
TCTACCTTCCAGGTGCTGAGATTGAGGCGTATGCCCAAGCCGCAGTCCTAAGTTTGGGTCTTGA
GTGTGTTGCTCATCAGCCGGTGTTGCTGAAGCAGGAGAGGCGGTCTTAGGTGGGGCCTGTGAGG
AAGTTGACACACTAGGATTTGCTCTTGAAGGGATGTCAAGCCCCGCCTCTCTGTTCTTTAACTT
TCCCGCCGCCATGAAGTAAATAGCTTTAC

hide sequence

Protein Sequences


Protein RefSeqs	NP_080874	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH27422	(Get FASTA)	NCBI Sequence Viewer
	AAK28349	(Get FASTA)	NCBI Sequence Viewer
	BAB27485	(Get FASTA)	NCBI Sequence Viewer
	BAB31565	(Get FASTA)	NCBI Sequence Viewer
	BAB31938	(Get FASTA)	NCBI Sequence Viewer
	BAE37321	(Get FASTA)	NCBI Sequence Viewer
	EDL36101	(Get FASTA)	NCBI Sequence Viewer
	EDL36102	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000022494
	ENSMUSP00000022494.9
GenBank Protein	Q9D0P0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_080874 ⟸ NM_026598
- UniProtKB:	Q9CRQ2 (UniProtKB/Swiss-Prot), Q3TQR1 (UniProtKB/Swiss-Prot), Q9CY81 (UniProtKB/Swiss-Prot), Q9D0P0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGEHWALGPEAGSSLLLCSALLAVGCALGLRLGRGRSAVERWVLAWLCYDSLVHFVLEGAFVYL SIVGNVADSQGLIASLWKEYGKADTRWLYSDPTVVSLEILTVVLDGLLALVLIYAIVKEKYYRH FVQIVLCVCELYGCWMTFFPEWLVGSPSLNTSSWLYLWVYLVFFNGLWVLIPGLLLWQSWVELK KRDSQEANLAKKHK hide sequence

Ensembl Acc Id:

ENSMUSP00000022494 ⟸ ENSMUST00000022494

Protein Domains

EXPERA

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9D0P0-F1-model_v2	AlphaFold	Q9D0P0	1-206	view protein structure

Promoters

RGD ID:

8682642

Promoter ID:

EPDNEW_M19351

Type:

initiation region

Name:

Ebpl_1

Description:

Mus musculus emopamil binding protein-like , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	14	61,360,431 - 61,360,491	EPDNEW

RGD ID:

6824851

Promoter ID:

MM_KWN:17135

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_026598

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	14	61,978,996 - 61,980,077 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1915427	AgrOrtholog
Ensembl Genes	ENSMUSG00000021928	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000022494	ENTREZGENE
	ENSMUST00000022494.10	UniProtKB/Swiss-Prot
InterPro	EBP	UniProtKB/Swiss-Prot
	EXPERA	UniProtKB/Swiss-Prot
KEGG Report	mmu:68177	UniProtKB/Swiss-Prot
MGD	MGI:1915427	ENTREZGENE
NCBI Gene	68177	ENTREZGENE
PANTHER	EMOPAMIL-BINDING PROTEIN-LIKE	UniProtKB/Swiss-Prot
	PTHR14207	UniProtKB/Swiss-Prot
Pfam	EBP	UniProtKB/Swiss-Prot
PhenoGen	Ebpl	PhenoGen
PROSITE	EXPERA	UniProtKB/Swiss-Prot
UniProt	EBPL_MOUSE	UniProtKB/Swiss-Prot
	Q3TQR1	ENTREZGENE
	Q9CRQ2	ENTREZGENE
	Q9CY81	ENTREZGENE
	Q9D0P0	ENTREZGENE
UniProt Secondary	Q3TQR1	UniProtKB/Swiss-Prot
	Q9CRQ2	UniProtKB/Swiss-Prot
	Q9CY81	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar