LOC101969744 (zinc finger protein 420-like) - Rat Genome Database

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Gene: LOC101969744 (zinc finger protein 420-like) Ictidomys tridecemlineatus
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Symbol: LOC101969744
Name: zinc finger protein 420-like
RGD ID: 12701442
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); INVOLVED IN regulation of transcription by RNA polymerase II (inferred); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC110597243; uncharacterized LOC110597243; zinc finger protein 345-like
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118161,166,007 - 161,255,415 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936930222,506 - 242,388 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_013366038   ⟹   XP_013221492
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118161,166,007 - 161,255,415 (+)NCBI
SpeTri2.0NW_004936930222,506 - 242,388 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002483072
Type: NON-CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118161,166,007 - 161,171,366 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013221492 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000024900.1
GenBank Protein KAG3279201 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_013221492   ⟸   XM_013366038
- Sequence:
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000031101 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000041909.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene LOC101969744 ENTREZGENE
PANTHER GH18834P-RELATED UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A287CU94_ICTTR UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-25 LOC101969744  zinc finger protein 420-like  LOC110597243  uncharacterized LOC110597243  Data merged from RGD:13197074 737654 PROVISIONAL
2017-07-13 LOC101969744  zinc finger protein 420-like    zinc finger protein 345-like  Symbol and/or name change 5135510 APPROVED